RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 CDC42BPAQ5VT25 1732 aa10.15□□□□□ -0.78
PVT1-217ENST00000523190 WDR7Q9Y4E6 1490 aa10.14□□□□□ -0.79
PVT1-217ENST00000523190 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
PVT1-217ENST00000523190 ASXL2Q76L83 1435 aa10.13□□□□□ -0.79
PVT1-217ENST00000523190 CAMSAP2Q08AD1 1489 aa10.12□□□□□ -0.79
PVT1-217ENST00000523190 PREX2Q70Z35 1606 aa10.12□□□□□ -0.79
PVT1-217ENST00000523190 NPM1P06748 294 aaKnown RBP eCLIP10.12□□□□□ -0.79
PVT1-217ENST00000523190 CYB5RLQ6IPT4 315 aa10.12□□□□□ -0.79
PVT1-217ENST00000523190 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
PVT1-217ENST00000523190 CFDP1Q9UEE9 299 aaPredicted RBP10.11□□□□□ -0.79
PVT1-217ENST00000523190 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
PVT1-217ENST00000523190 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
PVT1-217ENST00000523190 PTPRKQ15262 1439 aa10.1□□□□□ -0.79
PVT1-217ENST00000523190 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
PVT1-217ENST00000523190 ARHGAP5Q13017 1502 aa10.09□□□□□ -0.79
PVT1-217ENST00000523190 DNMT1P26358 1616 aaKnown RBP10.09□□□□□ -0.79
PVT1-217ENST00000523190 SAMD9LQ8IVG5 1584 aa10.09□□□□□ -0.79
PVT1-217ENST00000523190 DAPK1P53355 1430 aa10.07□□□□□ -0.8
PVT1-217ENST00000523190 ABCA9Q8IUA7 1624 aa10.07□□□□□ -0.8
PVT1-217ENST00000523190 ABCC5O15440 1437 aa10.07□□□□□ -0.8
PVT1-217ENST00000523190 PLCH2O75038 1416 aa10.07□□□□□ -0.8
PVT1-217ENST00000523190 MAPKBP1O60336 1514 aa10.06□□□□□ -0.8
PVT1-217ENST00000523190 SETD5Q9C0A6 1442 aa10.06□□□□□ -0.8
PVT1-217ENST00000523190 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
PVT1-217ENST00000523190 RAB3GAP2Q9H2M9 1393 aa10.05□□□□□ -0.8
PVT1-217ENST00000523190 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
PVT1-217ENST00000523190 SCAF1Q9H7N4 1312 aaKnown RBP10.05□□□□□ -0.8
PVT1-217ENST00000523190 SYCP2Q9BX26 1530 aa10.04□□□□□ -0.8
PVT1-217ENST00000523190 HRCP23327 699 aa10.04□□□□□ -0.8
PVT1-217ENST00000523190 ARAP3Q8WWN8 1544 aa10.03□□□□□ -0.8
PVT1-217ENST00000523190 HFM1A2PYH4 1435 aa10.03□□□□□ -0.8
PVT1-217ENST00000523190 ARHGEF5Q12774 1597 aa10.03□□□□□ -0.8
PVT1-217ENST00000523190 CCER1Q8TC90 406 aaPredicted RBP10.03□□□□□ -0.8
PVT1-217ENST00000523190 MBD5Q9P267 1494 aa10.03□□□□□ -0.8
PVT1-217ENST00000523190 GCC2Q8IWJ2 1684 aa10.02□□□□□ -0.8
PVT1-217ENST00000523190 NAIPQ13075 1403 aa10.02□□□□□ -0.81
PVT1-217ENST00000523190 AKNAQ7Z591 1439 aa10.02□□□□□ -0.81
PVT1-217ENST00000523190 HNRNPMP52272 730 aaKnown RBP eCLIP10.02□□□□□ -0.815e-7■■■■■ 33.6
PVT1-217ENST00000523190 RRP7BPQ9NSQ0 103 aa10.02□□□□□ -0.81
PVT1-217ENST00000523190 CCDC141Q6ZP82 1450 aa10.02□□□□□ -0.81
PVT1-217ENST00000523190 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
PVT1-217ENST00000523190 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.81
PVT1-217ENST00000523190 ABCC1P33527 1531 aa10.02□□□□□ -0.81
PVT1-217ENST00000523190 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
PVT1-217ENST00000523190 EFCAB2Q5VUJ9 269 aa10.01□□□□□ -0.81
PVT1-217ENST00000523190 SHANK2Q9UPX8 1470 aa10.01□□□□□ -0.81
PVT1-217ENST00000523190 ARHGEF12Q9NZN5 1544 aa10.01□□□□□ -0.81
PVT1-217ENST00000523190 C9orf84Q5VXU9 1444 aa10□□□□□ -0.81
PVT1-217ENST00000523190 FANCAO15360 1455 aa10□□□□□ -0.81
PVT1-217ENST00000523190 ADGRL2O95490 1459 aa10□□□□□ -0.81
PVT1-217ENST00000523190 ROCK1Q13464 1354 aa10□□□□□ -0.81
PVT1-217ENST00000523190 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
PVT1-217ENST00000523190 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
PVT1-217ENST00000523190 DIP2BQ9P265 1576 aa9.99□□□□□ -0.81
PVT1-217ENST00000523190 KDM6BO15054 1643 aa9.99□□□□□ -0.81
PVT1-217ENST00000523190 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
PVT1-217ENST00000523190 GLI2P10070 1586 aa9.98□□□□□ -0.81
PVT1-217ENST00000523190 MAP3K4Q9Y6R4 1608 aa9.98□□□□□ -0.81
PVT1-217ENST00000523190 CFAP74Q9C0B2 1584 aa9.97□□□□□ -0.81
PVT1-217ENST00000523190 MAST1Q9Y2H9 1570 aa9.97□□□□□ -0.81
PVT1-217ENST00000523190 CNKSR2Q8WXI2 1034 aa9.97□□□□□ -0.81
PVT1-217ENST00000523190 ANKRD30AQ9BXX3 1397 aa9.97□□□□□ -0.81
PVT1-217ENST00000523190 NCOA1Q15788 1441 aa9.97□□□□□ -0.81
PVT1-217ENST00000523190 TRAPPC8Q9Y2L5 1435 aa9.97□□□□□ -0.81
PVT1-217ENST00000523190 ADGRL1O94910 1474 aa9.97□□□□□ -0.81
PVT1-217ENST00000523190 TSPY4P0CV99 314 aa9.96□□□□□ -0.82
PVT1-217ENST00000523190 TSPY10P0CW01 314 aa9.96□□□□□ -0.82
PVT1-217ENST00000523190 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
PVT1-217ENST00000523190 SCAPERQ9BY12 1400 aa9.95□□□□□ -0.82
PVT1-217ENST00000523190 ZEB1P37275 1124 aaPredicted RBP9.94□□□□□ -0.82
PVT1-217ENST00000523190 FAM69CQ0P6D2 419 aa9.94□□□□□ -0.82
PVT1-217ENST00000523190 PLXNC1O60486 1568 aa9.93□□□□□ -0.82
PVT1-217ENST00000523190 NEO1Q92859 1461 aa9.93□□□□□ -0.82
PVT1-217ENST00000523190 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
PVT1-217ENST00000523190 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
PVT1-217ENST00000523190 INO80Q9ULG1 1556 aaPredicted RBP9.92□□□□□ -0.82
PVT1-217ENST00000523190 ANKRD50Q9ULJ7 1429 aa9.91□□□□□ -0.82
PVT1-217ENST00000523190 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
PVT1-217ENST00000523190 PPRC1Q5VV67 1664 aaKnown RBP9.91□□□□□ -0.82
PVT1-217ENST00000523190 AFAP1Q8N556 730 aa9.91□□□□□ -0.82
PVT1-217ENST00000523190 ATP7AQ04656 1500 aa9.91□□□□□ -0.82
PVT1-217ENST00000523190 SPAG9O60271 1321 aaKnown RBP9.9□□□□□ -0.82
PVT1-217ENST00000523190 TSPOAP1O95153 1857 aa9.9□□□□□ -0.82
PVT1-217ENST00000523190 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
PVT1-217ENST00000523190 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
PVT1-217ENST00000523190 ZNF518AQ6AHZ1 1483 aa9.9□□□□□ -0.83
PVT1-217ENST00000523190 RTEL1-TNFRSF6BF6WH68 1400 aa9.9□□□□□ -0.83
PVT1-217ENST00000523190 POGZQ7Z3K3 1410 aa9.9□□□□□ -0.83
PVT1-217ENST00000523190 CLSPNQ9HAW4 1339 aa9.89□□□□□ -0.83
PVT1-217ENST00000523190 KDM5CP41229 1560 aa9.88□□□□□ -0.83
PVT1-217ENST00000523190 DUOX2Q9NRD8 1548 aa9.88□□□□□ -0.83
PVT1-217ENST00000523190 DENND4BO75064 1496 aaPredicted RBP9.88□□□□□ -0.83
PVT1-217ENST00000523190 TEX14Q8IWB6 1497 aa9.87□□□□□ -0.83
PVT1-217ENST00000523190 MYT1LQ9UL68 1186 aa9.87□□□□□ -0.83
PVT1-217ENST00000523190 KIDINS220Q9ULH0 1771 aa9.87□□□□□ -0.83
PVT1-217ENST00000523190 HECW2Q9P2P5 1572 aa9.87□□□□□ -0.83
PVT1-217ENST00000523190 PZPP20742 1482 aa9.86□□□□□ -0.83
PVT1-217ENST00000523190 RICTORQ6R327 1708 aa9.86□□□□□ -0.83
PVT1-217ENST00000523190 ACIN1Q9UKV3 1341 aaKnown RBP9.85□□□□□ -0.83
PVT1-217ENST00000523190 UNC13BO14795 1591 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms