RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.06
CDKL3-208ENST00000522501 PREX1Q8TCU6 1659 aa14.71□□□□□ -0.06
CDKL3-208ENST00000522501 FHOD3Q2V2M9 1422 aa14.7□□□□□ -0.06
CDKL3-208ENST00000522501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.7□□□□□ -0.06
CDKL3-208ENST00000522501 DENND4BO75064 1496 aaPredicted RBP14.69□□□□□ -0.06
CDKL3-208ENST00000522501 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
CDKL3-208ENST00000522501 ZBTB22O15209 634 aa14.66□□□□□ -0.06
CDKL3-208ENST00000522501 MYO5CQ9NQX4 1742 aa14.66□□□□□ -0.06
CDKL3-208ENST00000522501 AKNAQ7Z591 1439 aa14.66□□□□□ -0.06
CDKL3-208ENST00000522501 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
CDKL3-208ENST00000522501 ARID4BQ4LE39 1312 aaPredicted RBP14.65□□□□□ -0.06
CDKL3-208ENST00000522501 FAM9AQ8IZU1 332 aaPredicted RBP14.64□□□□□ -0.07
CDKL3-208ENST00000522501 POGZQ7Z3K3 1410 aa14.64□□□□□ -0.07
CDKL3-208ENST00000522501 MAGI2Q86UL8 1455 aa14.63□□□□□ -0.07
CDKL3-208ENST00000522501 YEATS2Q9ULM3 1422 aa14.63□□□□□ -0.07
CDKL3-208ENST00000522501 ARHGEF12Q9NZN5 1544 aa14.62□□□□□ -0.07
CDKL3-208ENST00000522501 STRCQ7RTU9 1775 aa14.62□□□□□ -0.07
CDKL3-208ENST00000522501 CDK13Q14004 1512 aaKnown RBP14.59□□□□□ -0.07
CDKL3-208ENST00000522501 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
CDKL3-208ENST00000522501 HSPA2P54652 639 aa14.57□□□□□ -0.08
CDKL3-208ENST00000522501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
CDKL3-208ENST00000522501 HNRNPUL2Q1KMD3 747 aaKnown RBP14.56□□□□□ -0.08
CDKL3-208ENST00000522501 KDM5CP41229 1560 aa14.56□□□□□ -0.08
CDKL3-208ENST00000522501 C9orf84Q5VXU9 1444 aa14.55□□□□□ -0.08
CDKL3-208ENST00000522501 C3P01024 1663 aa14.55□□□□□ -0.08
CDKL3-208ENST00000522501 LRRIQ1Q96JM4 1722 aa14.55□□□□□ -0.08
CDKL3-208ENST00000522501 EEA1Q15075 1411 aa14.54□□□□□ -0.08
CDKL3-208ENST00000522501 KIF14Q15058 1648 aa14.54□□□□□ -0.08
CDKL3-208ENST00000522501 SETD1BQ9UPS6 1966 aaKnown RBP14.53□□□□□ -0.08
CDKL3-208ENST00000522501 REREQ9P2R6 1566 aa14.53□□□□□ -0.08
CDKL3-208ENST00000522501 SPATA31D1Q6ZQQ2 1576 aa14.52□□□□□ -0.08
CDKL3-208ENST00000522501 DIP2CQ9Y2E4 1556 aa14.52□□□□□ -0.08
CDKL3-208ENST00000522501 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
CDKL3-208ENST00000522501 CERKQ8TCT0 537 aa14.52□□□□□ -0.09
CDKL3-208ENST00000522501 ABCA6Q8N139 1617 aa14.52□□□□□ -0.09
CDKL3-208ENST00000522501 ATP10AO60312 1499 aa14.51□□□□□ -0.09
CDKL3-208ENST00000522501 PLCH2O75038 1416 aa14.51□□□□□ -0.09
CDKL3-208ENST00000522501 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
CDKL3-208ENST00000522501 SCAPERQ9BY12 1400 aa14.5□□□□□ -0.09
CDKL3-208ENST00000522501 CDC42BPBQ9Y5S2 1711 aa14.5□□□□□ -0.09
CDKL3-208ENST00000522501 ZNF518AQ6AHZ1 1483 aa14.49□□□□□ -0.09
CDKL3-208ENST00000522501 ITSN2Q9NZM3 1697 aa14.49□□□□□ -0.09
CDKL3-208ENST00000522501 PREX2Q70Z35 1606 aa14.48□□□□□ -0.09
CDKL3-208ENST00000522501 UHRF1BP1Q6BDS2 1440 aa14.46□□□□□ -0.09
CDKL3-208ENST00000522501 MLECQ14165 292 aa14.45□□□□□ -0.1
CDKL3-208ENST00000522501 ARHGAP5Q13017 1502 aa14.45□□□□□ -0.1
CDKL3-208ENST00000522501 MROH2AA6NES4 1674 aa14.44□□□□□ -0.1
CDKL3-208ENST00000522501 ABCC1P33527 1531 aa14.43□□□□□ -0.1
CDKL3-208ENST00000522501 AGLP35573 1532 aa14.42□□□□□ -0.1
CDKL3-208ENST00000522501 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
CDKL3-208ENST00000522501 CDC42BPAQ5VT25 1732 aa14.42□□□□□ -0.1
CDKL3-208ENST00000522501 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
CDKL3-208ENST00000522501 RANGAP1P46060 587 aaPredicted RBP14.42□□□□□ -0.1
CDKL3-208ENST00000522501 KIDINS220Q9ULH0 1771 aa14.42□□□□□ -0.1
CDKL3-208ENST00000522501 FMN1Q68DA7 1419 aa14.41□□□□□ -0.1
CDKL3-208ENST00000522501 DISP3Q9P2K9 1392 aa14.41□□□□□ -0.1
CDKL3-208ENST00000522501 IQSEC2Q5JU85 1478 aa14.41□□□□□ -0.1
CDKL3-208ENST00000522501 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
CDKL3-208ENST00000522501 PTPRTO14522 1441 aa14.41□□□□□ -0.1
CDKL3-208ENST00000522501 ZNF142P52746 1687 aaPredicted RBP14.4□□□□□ -0.1
CDKL3-208ENST00000522501 TROQ12816 1431 aaPredicted RBP14.39□□□□□ -0.11
CDKL3-208ENST00000522501 ARHGAP35Q9NRY4 1499 aa14.38□□□□□ -0.11
CDKL3-208ENST00000522501 MLH3Q9UHC1 1453 aa14.38□□□□□ -0.11
CDKL3-208ENST00000522501 ILDR2Q71H61 639 aa14.38□□□□□ -0.11
CDKL3-208ENST00000522501 MYO3AQ8NEV4 1616 aa14.37□□□□□ -0.11
CDKL3-208ENST00000522501 CLIP1P30622 1438 aa14.36□□□□□ -0.11
CDKL3-208ENST00000522501 SOCS7O14512 581 aa14.36□□□□□ -0.11
CDKL3-208ENST00000522501 CEBPAP49715 358 aaPredicted RBP14.36□□□□□ -0.11
CDKL3-208ENST00000522501 EFCAB2Q5VUJ9 269 aa14.36□□□□□ -0.11
CDKL3-208ENST00000522501 NCOA1Q15788 1441 aa14.35□□□□□ -0.11
CDKL3-208ENST00000522501 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.12
CDKL3-208ENST00000522501 CLTCQ00610 1675 aaKnown RBP14.33□□□□□ -0.12
CDKL3-208ENST00000522501 CNTLNQ9NXG0 1405 aa14.32□□□□□ -0.12
CDKL3-208ENST00000522501 PLXNC1O60486 1568 aa14.31□□□□□ -0.12
CDKL3-208ENST00000522501 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
CDKL3-208ENST00000522501 TRAPPC8Q9Y2L5 1435 aa14.31□□□□□ -0.12
CDKL3-208ENST00000522501 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
CDKL3-208ENST00000522501 AFAP1Q8N556 730 aa14.3□□□□□ -0.12
CDKL3-208ENST00000522501 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
CDKL3-208ENST00000522501 CDK11AQ9UQ88 783 aaPredicted RBP14.29□□□□□ -0.12
CDKL3-208ENST00000522501 NPATQ14207 1427 aa14.29□□□□□ -0.12
CDKL3-208ENST00000522501 POLR1AO95602 1720 aaPredicted RBP14.29□□□□□ -0.12
CDKL3-208ENST00000522501 SYCP2Q9BX26 1530 aa14.28□□□□□ -0.12
CDKL3-208ENST00000522501 CEP170BQ9Y4F5 1589 aaPredicted RBP14.27□□□□□ -0.12
CDKL3-208ENST00000522501 ADGBQ8N7X0 1667 aa14.26□□□□□ -0.13
CDKL3-208ENST00000522501 ATP7AQ04656 1500 aa14.25□□□□□ -0.13
CDKL3-208ENST00000522501 PLA2R1Q13018 1463 aa14.25□□□□□ -0.13
CDKL3-208ENST00000522501 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
CDKL3-208ENST00000522501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDKL3-208ENST00000522501 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
CDKL3-208ENST00000522501 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
CDKL3-208ENST00000522501 CASKIN1Q8WXD9 1431 aa14.23□□□□□ -0.13
CDKL3-208ENST00000522501 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
CDKL3-208ENST00000522501 MYT1LQ9UL68 1186 aa14.22□□□□□ -0.13
CDKL3-208ENST00000522501 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
CDKL3-208ENST00000522501 ESF1Q9H501 851 aaKnown RBP14.2□□□□□ -0.14
CDKL3-208ENST00000522501 MED1Q15648 1581 aaPredicted RBP14.18□□□□□ -0.14
CDKL3-208ENST00000522501 DNMT1P26358 1616 aaKnown RBP14.18□□□□□ -0.14
CDKL3-208ENST00000522501 NEURL4Q96JN8 1562 aa14.17□□□□□ -0.14
CDKL3-208ENST00000522501 PTPRKQ15262 1439 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms