RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ABCA9Q8IUA7 1624 aa18.82■□□□□ 0.6
PABPC1-219ENST00000522387 CDC42BPBQ9Y5S2 1711 aa18.82■□□□□ 0.6
PABPC1-219ENST00000522387 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
PABPC1-219ENST00000522387 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
PABPC1-219ENST00000522387 KIF13AQ9H1H9 1805 aa18.8■□□□□ 0.6
PABPC1-219ENST00000522387 PLCH2O75038 1416 aa18.8■□□□□ 0.6
PABPC1-219ENST00000522387 EFCAB2Q5VUJ9 269 aa18.79■□□□□ 0.6
PABPC1-219ENST00000522387 PREX2Q70Z35 1606 aa18.78■□□□□ 0.6
PABPC1-219ENST00000522387 CHIC2Q9UKJ5 165 aa18.78■□□□□ 0.6
PABPC1-219ENST00000522387 FANCAO15360 1455 aa18.78■□□□□ 0.6
PABPC1-219ENST00000522387 PTPN23Q9H3S7 1636 aa18.77■□□□□ 0.6
PABPC1-219ENST00000522387 ITSN2Q9NZM3 1697 aa18.77■□□□□ 0.6
PABPC1-219ENST00000522387 RRBP1Q9P2E9 1410 aaKnown RBP18.77■□□□□ 0.59
PABPC1-219ENST00000522387 CAMSAP2Q08AD1 1489 aa18.75■□□□□ 0.59
PABPC1-219ENST00000522387 MAP3K4Q9Y6R4 1608 aa18.75■□□□□ 0.59
PABPC1-219ENST00000522387 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
PABPC1-219ENST00000522387 GLI2P10070 1586 aa18.73■□□□□ 0.59
PABPC1-219ENST00000522387 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
PABPC1-219ENST00000522387 AFAP1Q8N556 730 aa18.72■□□□□ 0.59
PABPC1-219ENST00000522387 RAPGEF3O95398 923 aa18.71■□□□□ 0.59
PABPC1-219ENST00000522387 MYT1LQ9UL68 1186 aa18.71■□□□□ 0.58
PABPC1-219ENST00000522387 SYCP2Q9BX26 1530 aa18.7■□□□□ 0.58
PABPC1-219ENST00000522387 AKNAQ7Z591 1439 aa18.69■□□□□ 0.58
PABPC1-219ENST00000522387 ARHGEF12Q9NZN5 1544 aa18.69■□□□□ 0.58
PABPC1-219ENST00000522387 ADGRL1O94910 1474 aa18.69■□□□□ 0.58
PABPC1-219ENST00000522387 SCAPERQ9BY12 1400 aa18.68■□□□□ 0.58
PABPC1-219ENST00000522387 PPRC1Q5VV67 1664 aaKnown RBP18.67■□□□□ 0.58
PABPC1-219ENST00000522387 PTPRKQ15262 1439 aa18.66■□□□□ 0.58
PABPC1-219ENST00000522387 TCOF1Q13428 1488 aaKnown RBP18.66■□□□□ 0.58
PABPC1-219ENST00000522387 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
PABPC1-219ENST00000522387 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
PABPC1-219ENST00000522387 TSPY4P0CV99 314 aa18.64■□□□□ 0.57
PABPC1-219ENST00000522387 TSPY10P0CW01 314 aa18.64■□□□□ 0.57
PABPC1-219ENST00000522387 ABCC5O15440 1437 aa18.64■□□□□ 0.57
PABPC1-219ENST00000522387 MBD5Q9P267 1494 aa18.63■□□□□ 0.57
PABPC1-219ENST00000522387 DAPK1P53355 1430 aa18.63■□□□□ 0.57
PABPC1-219ENST00000522387 ABCC1P33527 1531 aa18.62■□□□□ 0.57
PABPC1-219ENST00000522387 ARAP3Q8WWN8 1544 aa18.62■□□□□ 0.57
PABPC1-219ENST00000522387 TEX14Q8IWB6 1497 aa18.61■□□□□ 0.57
PABPC1-219ENST00000522387 NEO1Q92859 1461 aa18.59■□□□□ 0.57
PABPC1-219ENST00000522387 COL17A1Q9UMD9 1497 aaPredicted RBP18.59■□□□□ 0.57
PABPC1-219ENST00000522387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.579e-8■□□□□ 8.7
PABPC1-219ENST00000522387 KIAA1107Q9UPP5 1409 aa18.58■□□□□ 0.57
PABPC1-219ENST00000522387 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.56
PABPC1-219ENST00000522387 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.56
PABPC1-219ENST00000522387 PLEKHH2Q8IVE3 1493 aa18.57■□□□□ 0.56
PABPC1-219ENST00000522387 SPAG9O60271 1321 aaKnown RBP18.57■□□□□ 0.56
PABPC1-219ENST00000522387 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
PABPC1-219ENST00000522387 DENND4BO75064 1496 aaPredicted RBP18.56■□□□□ 0.56
PABPC1-219ENST00000522387 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
PABPC1-219ENST00000522387 POGZQ7Z3K3 1410 aa18.54■□□□□ 0.56
PABPC1-219ENST00000522387 RSPH4AQ5TD94 716 aa18.54■□□□□ 0.56
PABPC1-219ENST00000522387 ZNF518AQ6AHZ1 1483 aa18.53■□□□□ 0.56
PABPC1-219ENST00000522387 ARHGEF5Q12774 1597 aa18.52■□□□□ 0.55
PABPC1-219ENST00000522387 CROCC2H7BZ55 1655 aa18.49■□□□□ 0.55
PABPC1-219ENST00000522387 NCOA1Q15788 1441 aa18.48■□□□□ 0.55
PABPC1-219ENST00000522387 ANKRD30AQ9BXX3 1397 aa18.48■□□□□ 0.55
PABPC1-219ENST00000522387 RICTORQ6R327 1708 aa18.47■□□□□ 0.55
PABPC1-219ENST00000522387 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
PABPC1-219ENST00000522387 FRMPD1Q5SYB0 1578 aa18.47■□□□□ 0.55
PABPC1-219ENST00000522387 YEATS2Q9ULM3 1422 aa18.46■□□□□ 0.55
PABPC1-219ENST00000522387 KDM6BO15054 1643 aa18.46■□□□□ 0.55
PABPC1-219ENST00000522387 ATP7AQ04656 1500 aa18.45■□□□□ 0.54
PABPC1-219ENST00000522387 ZFYVE16Q7Z3T8 1539 aa18.45■□□□□ 0.54
PABPC1-219ENST00000522387 NAIPQ13075 1403 aa18.44■□□□□ 0.54
PABPC1-219ENST00000522387 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
PABPC1-219ENST00000522387 SHANK2Q9UPX8 1470 aa18.44■□□□□ 0.54
PABPC1-219ENST00000522387 KIDINS220Q9ULH0 1771 aa18.43■□□□□ 0.54
PABPC1-219ENST00000522387 KDM5CP41229 1560 aa18.43■□□□□ 0.54
PABPC1-219ENST00000522387 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
PABPC1-219ENST00000522387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
PABPC1-219ENST00000522387 HFM1A2PYH4 1435 aa18.41■□□□□ 0.54
PABPC1-219ENST00000522387 HECW2Q9P2P5 1572 aa18.41■□□□□ 0.54
PABPC1-219ENST00000522387 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
PABPC1-219ENST00000522387 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
PABPC1-219ENST00000522387 ROCK1Q13464 1354 aa18.41■□□□□ 0.54
PABPC1-219ENST00000522387 INO80Q9ULG1 1556 aaPredicted RBP18.4■□□□□ 0.54
PABPC1-219ENST00000522387 ANKRD50Q9ULJ7 1429 aa18.39■□□□□ 0.54
PABPC1-219ENST00000522387 ADGRL2O95490 1459 aa18.39■□□□□ 0.53
PABPC1-219ENST00000522387 MLH3Q9UHC1 1453 aa18.39■□□□□ 0.53
PABPC1-219ENST00000522387 KIF3BO15066 747 aa18.39■□□□□ 0.53
PABPC1-219ENST00000522387 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
PABPC1-219ENST00000522387 MAST1Q9Y2H9 1570 aa18.37■□□□□ 0.53
PABPC1-219ENST00000522387 ABCA6Q8N139 1617 aa18.37■□□□□ 0.53
PABPC1-219ENST00000522387 MLECQ14165 292 aa18.37■□□□□ 0.53
PABPC1-219ENST00000522387 GGT6Q6P531 493 aa18.36■□□□□ 0.53
PABPC1-219ENST00000522387 ARID4BQ4LE39 1312 aaPredicted RBP18.36■□□□□ 0.53
PABPC1-219ENST00000522387 PLXNC1O60486 1568 aa18.33■□□□□ 0.53
PABPC1-219ENST00000522387 DIP2CQ9Y2E4 1556 aa18.33■□□□□ 0.53
PABPC1-219ENST00000522387 A2MP01023 1474 aa18.33■□□□□ 0.52
PABPC1-219ENST00000522387 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.52
PABPC1-219ENST00000522387 DHX29Q7Z478 1369 aaKnown RBP18.32■□□□□ 0.52
PABPC1-219ENST00000522387 GCC2Q8IWJ2 1684 aa18.32■□□□□ 0.52
PABPC1-219ENST00000522387 DUOX2Q9NRD8 1548 aa18.32■□□□□ 0.52
PABPC1-219ENST00000522387 ATP10AO60312 1499 aa18.29■□□□□ 0.52
PABPC1-219ENST00000522387 MAGI2Q86UL8 1455 aa18.29■□□□□ 0.52
PABPC1-219ENST00000522387 FOXD1Q16676 465 aa18.29■□□□□ 0.52
PABPC1-219ENST00000522387 NUP155O75694 1391 aa18.28■□□□□ 0.52
PABPC1-219ENST00000522387 CCER1Q8TC90 406 aaPredicted RBP18.28■□□□□ 0.52
PABPC1-219ENST00000522387 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms