RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 PLEKHD1A6NEE1 506 aa11.4□□□□□ -0.58
SH2D4A-205ENST00000522328 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
SH2D4A-205ENST00000522328 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
SH2D4A-205ENST00000522328 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
SH2D4A-205ENST00000522328 FRMPD1Q5SYB0 1578 aa11.37□□□□□ -0.59
SH2D4A-205ENST00000522328 APLP2Q06481 763 aa11.37□□□□□ -0.59
SH2D4A-205ENST00000522328 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
SH2D4A-205ENST00000522328 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
SH2D4A-205ENST00000522328 ADAMTSL3P82987 1691 aa11.36□□□□□ -0.59
SH2D4A-205ENST00000522328 RANGAP1P46060 587 aaPredicted RBP11.36□□□□□ -0.59
SH2D4A-205ENST00000522328 PTPRMP28827 1452 aa11.36□□□□□ -0.59
SH2D4A-205ENST00000522328 FANCAO15360 1455 aa11.35□□□□□ -0.59
SH2D4A-205ENST00000522328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.35□□□□□ -0.59
SH2D4A-205ENST00000522328 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
SH2D4A-205ENST00000522328 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
SH2D4A-205ENST00000522328 BCORL1Q5H9F3 1711 aa11.34□□□□□ -0.59
SH2D4A-205ENST00000522328 ZMYM4Q5VZL5 1548 aa11.33□□□□□ -0.6
SH2D4A-205ENST00000522328 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
SH2D4A-205ENST00000522328 ARID4BQ4LE39 1312 aaPredicted RBP11.33□□□□□ -0.6
SH2D4A-205ENST00000522328 MAGI2Q86UL8 1455 aa11.32□□□□□ -0.6
SH2D4A-205ENST00000522328 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
SH2D4A-205ENST00000522328 TTC37Q6PGP7 1564 aa11.32□□□□□ -0.6
SH2D4A-205ENST00000522328 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
SH2D4A-205ENST00000522328 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
SH2D4A-205ENST00000522328 CDK11AQ9UQ88 783 aaPredicted RBP11.3□□□□□ -0.6
SH2D4A-205ENST00000522328 HECW1Q76N89 1606 aa11.3□□□□□ -0.6
SH2D4A-205ENST00000522328 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
SH2D4A-205ENST00000522328 PLCH2O75038 1416 aa11.29□□□□□ -0.6
SH2D4A-205ENST00000522328 UBTFP17480 764 aaKnown RBP11.29□□□□□ -0.6
SH2D4A-205ENST00000522328 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
SH2D4A-205ENST00000522328 ARHGAP35Q9NRY4 1499 aa11.27□□□□□ -0.6
SH2D4A-205ENST00000522328 PCF11O94913 1555 aaKnown RBP11.27□□□□□ -0.61
SH2D4A-205ENST00000522328 SCAPERQ9BY12 1400 aa11.26□□□□□ -0.61
SH2D4A-205ENST00000522328 EFCAB2Q5VUJ9 269 aa11.26□□□□□ -0.61
SH2D4A-205ENST00000522328 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
SH2D4A-205ENST00000522328 CLIP1P30622 1438 aa11.25□□□□□ -0.61
SH2D4A-205ENST00000522328 TROQ12816 1431 aaPredicted RBP11.25□□□□□ -0.61
SH2D4A-205ENST00000522328 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
SH2D4A-205ENST00000522328 KIF14Q15058 1648 aa11.24□□□□□ -0.61
SH2D4A-205ENST00000522328 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
SH2D4A-205ENST00000522328 MYO5CQ9NQX4 1742 aa11.24□□□□□ -0.61
SH2D4A-205ENST00000522328 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
SH2D4A-205ENST00000522328 FBXO41Q8TF61 875 aa11.23□□□□□ -0.61
SH2D4A-205ENST00000522328 ATP10AO60312 1499 aa11.22□□□□□ -0.61
SH2D4A-205ENST00000522328 C9orf84Q5VXU9 1444 aa11.22□□□□□ -0.61
SH2D4A-205ENST00000522328 ZNF518AQ6AHZ1 1483 aa11.22□□□□□ -0.61
SH2D4A-205ENST00000522328 ARHGAP5Q13017 1502 aa11.2□□□□□ -0.62
SH2D4A-205ENST00000522328 CCDC18Q5T9S5 1454 aa11.2□□□□□ -0.62
SH2D4A-205ENST00000522328 KDM5CP41229 1560 aa11.2□□□□□ -0.62
SH2D4A-205ENST00000522328 ARHGEF12Q9NZN5 1544 aa11.19□□□□□ -0.62
SH2D4A-205ENST00000522328 FER1L4A9Z1Z3 1794 aa11.19□□□□□ -0.62
SH2D4A-205ENST00000522328 SIGLEC1Q9BZZ2 1709 aa11.19□□□□□ -0.62
SH2D4A-205ENST00000522328 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
SH2D4A-205ENST00000522328 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
SH2D4A-205ENST00000522328 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
SH2D4A-205ENST00000522328 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
SH2D4A-205ENST00000522328 MLECQ14165 292 aa11.17□□□□□ -0.62
SH2D4A-205ENST00000522328 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
SH2D4A-205ENST00000522328 MLH3Q9UHC1 1453 aa11.16□□□□□ -0.62
SH2D4A-205ENST00000522328 PREX2Q70Z35 1606 aa11.15□□□□□ -0.62
SH2D4A-205ENST00000522328 LRRIQ1Q96JM4 1722 aa11.15□□□□□ -0.63
SH2D4A-205ENST00000522328 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
SH2D4A-205ENST00000522328 HSPA2P54652 639 aa11.14□□□□□ -0.63
SH2D4A-205ENST00000522328 AFAP1Q8N556 730 aa11.14□□□□□ -0.63
SH2D4A-205ENST00000522328 ABCC1P33527 1531 aa11.14□□□□□ -0.63
SH2D4A-205ENST00000522328 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
SH2D4A-205ENST00000522328 DIP2CQ9Y2E4 1556 aa11.13□□□□□ -0.63
SH2D4A-205ENST00000522328 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
SH2D4A-205ENST00000522328 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
SH2D4A-205ENST00000522328 PREX1Q8TCU6 1659 aa11.13□□□□□ -0.63
SH2D4A-205ENST00000522328 AGLP35573 1532 aa11.13□□□□□ -0.63
SH2D4A-205ENST00000522328 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
SH2D4A-205ENST00000522328 UHRF1BP1Q6BDS2 1440 aa11.1□□□□□ -0.63
SH2D4A-205ENST00000522328 TRAPPC8Q9Y2L5 1435 aa11.1□□□□□ -0.63
SH2D4A-205ENST00000522328 ABCA6Q8N139 1617 aa11.1□□□□□ -0.63
SH2D4A-205ENST00000522328 ITSN2Q9NZM3 1697 aa11.1□□□□□ -0.63
SH2D4A-205ENST00000522328 ESF1Q9H501 851 aaKnown RBP11.09□□□□□ -0.63
SH2D4A-205ENST00000522328 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
SH2D4A-205ENST00000522328 PROM2Q8N271 834 aa11.08□□□□□ -0.64
SH2D4A-205ENST00000522328 CDC42BPAQ5VT25 1732 aa11.08□□□□□ -0.64
SH2D4A-205ENST00000522328 PLEKHH2Q8IVE3 1493 aa11.07□□□□□ -0.64
SH2D4A-205ENST00000522328 SETD1BQ9UPS6 1966 aaKnown RBP11.07□□□□□ -0.64
SH2D4A-205ENST00000522328 CEBPAP49715 358 aaPredicted RBP11.07□□□□□ -0.64
SH2D4A-205ENST00000522328 POLA2Q14181 598 aa11.07□□□□□ -0.64
SH2D4A-205ENST00000522328 CERKQ8TCT0 537 aa11.07□□□□□ -0.64
SH2D4A-205ENST00000522328 KIDINS220Q9ULH0 1771 aa11.06□□□□□ -0.64
SH2D4A-205ENST00000522328 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
SH2D4A-205ENST00000522328 KIAA1107Q9UPP5 1409 aa11.06□□□□□ -0.64
SH2D4A-205ENST00000522328 SAMD9LQ8IVG5 1584 aa11.06□□□□□ -0.64
SH2D4A-205ENST00000522328 CAPN15O75808 1086 aa11.05□□□□□ -0.64
SH2D4A-205ENST00000522328 C3P01024 1663 aa11.04□□□□□ -0.64
SH2D4A-205ENST00000522328 SYCP2Q9BX26 1530 aa11.04□□□□□ -0.64
SH2D4A-205ENST00000522328 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
SH2D4A-205ENST00000522328 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
SH2D4A-205ENST00000522328 SPAG9O60271 1321 aaKnown RBP11.04□□□□□ -0.64
SH2D4A-205ENST00000522328 PTPRTO14522 1441 aa11.03□□□□□ -0.64
SH2D4A-205ENST00000522328 NPATQ14207 1427 aa11.03□□□□□ -0.64
SH2D4A-205ENST00000522328 CFDP1Q9UEE9 299 aaPredicted RBP11.03□□□□□ -0.64
SH2D4A-205ENST00000522328 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
SH2D4A-205ENST00000522328 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms