RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 UGGT2Q9NYU1 1516 aa16.85■□□□□ 0.29
DENND3-217ENST00000521835 NBPF8Q3BBV2 869 aa16.85■□□□□ 0.29
DENND3-217ENST00000521835 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
DENND3-217ENST00000521835 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
DENND3-217ENST00000521835 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
DENND3-217ENST00000521835 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
DENND3-217ENST00000521835 PRG4Q92954 1404 aaPredicted RBP16.82■□□□□ 0.28
DENND3-217ENST00000521835 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
DENND3-217ENST00000521835 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
DENND3-217ENST00000521835 PKD2Q13563 968 aa16.77■□□□□ 0.28
DENND3-217ENST00000521835 PBRM1Q86U86 1689 aa16.76■□□□□ 0.27
DENND3-217ENST00000521835 PLB1Q6P1J6 1458 aa16.76■□□□□ 0.27
DENND3-217ENST00000521835 DENND4BO75064 1496 aaPredicted RBP16.75■□□□□ 0.27
DENND3-217ENST00000521835 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
DENND3-217ENST00000521835 DAPK1P53355 1430 aa16.74■□□□□ 0.27
DENND3-217ENST00000521835 JPH4Q96JJ6 628 aa16.73■□□□□ 0.27
DENND3-217ENST00000521835 ABCC5O15440 1437 aa16.73■□□□□ 0.27
DENND3-217ENST00000521835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
DENND3-217ENST00000521835 WDR62O43379 1518 aa16.72■□□□□ 0.27
DENND3-217ENST00000521835 SALL2Q9Y467 1007 aaPredicted RBP16.72■□□□□ 0.27
DENND3-217ENST00000521835 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.27
DENND3-217ENST00000521835 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
DENND3-217ENST00000521835 PLEKHD1A6NEE1 506 aa16.71■□□□□ 0.26
DENND3-217ENST00000521835 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.26
DENND3-217ENST00000521835 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.26
DENND3-217ENST00000521835 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
DENND3-217ENST00000521835 CCDC7Q96M83 1385 aa16.69■□□□□ 0.26
DENND3-217ENST00000521835 KDM5BQ9UGL1 1544 aa16.69■□□□□ 0.26
DENND3-217ENST00000521835 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
DENND3-217ENST00000521835 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
DENND3-217ENST00000521835 DISP1Q96F81 1524 aa16.68■□□□□ 0.26
DENND3-217ENST00000521835 ANKRD30BQ9BXX2 1392 aa16.67■□□□□ 0.26
DENND3-217ENST00000521835 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
DENND3-217ENST00000521835 TCOF1Q13428 1488 aaKnown RBP16.67■□□□□ 0.26
DENND3-217ENST00000521835 B4GALNT3Q6L9W6 998 aa16.67■□□□□ 0.26
DENND3-217ENST00000521835 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
DENND3-217ENST00000521835 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
DENND3-217ENST00000521835 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
DENND3-217ENST00000521835 CNTLNQ9NXG0 1405 aa16.66■□□□□ 0.26
DENND3-217ENST00000521835 TSPY4P0CV99 314 aa16.65■□□□□ 0.26
DENND3-217ENST00000521835 TSPY10P0CW01 314 aa16.65■□□□□ 0.26
DENND3-217ENST00000521835 NUP155O75694 1391 aa16.65■□□□□ 0.26
DENND3-217ENST00000521835 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
DENND3-217ENST00000521835 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
DENND3-217ENST00000521835 KIAA0556O60303 1618 aa16.63■□□□□ 0.25
DENND3-217ENST00000521835 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
DENND3-217ENST00000521835 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
DENND3-217ENST00000521835 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
DENND3-217ENST00000521835 USP47Q96K76 1375 aa16.6■□□□□ 0.25
DENND3-217ENST00000521835 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
DENND3-217ENST00000521835 GCC2Q8IWJ2 1684 aa16.6■□□□□ 0.25
DENND3-217ENST00000521835 RPRD2Q5VT52 1461 aaKnown RBP16.59■□□□□ 0.25
DENND3-217ENST00000521835 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
DENND3-217ENST00000521835 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.24
DENND3-217ENST00000521835 CARMIL2Q6F5E8 1435 aa16.57■□□□□ 0.24
DENND3-217ENST00000521835 KIF14Q15058 1648 aa16.57■□□□□ 0.24
DENND3-217ENST00000521835 AKNAQ7Z591 1439 aa16.57■□□□□ 0.24
DENND3-217ENST00000521835 NCOA1Q15788 1441 aa16.57■□□□□ 0.24
DENND3-217ENST00000521835 TMC1Q8TDI8 760 aa16.57■□□□□ 0.24
DENND3-217ENST00000521835 ST20-MTHFSA0A0A6YYL1 179 aa16.56■□□□□ 0.24
DENND3-217ENST00000521835 ANKRD50Q9ULJ7 1429 aa16.56■□□□□ 0.24
DENND3-217ENST00000521835 GPATCH8Q9UKJ3 1502 aaKnown RBP16.56■□□□□ 0.24
DENND3-217ENST00000521835 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
DENND3-217ENST00000521835 TEX14Q8IWB6 1497 aa16.54■□□□□ 0.24
DENND3-217ENST00000521835 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
DENND3-217ENST00000521835 PZPP20742 1482 aa16.53■□□□□ 0.24
DENND3-217ENST00000521835 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.24
DENND3-217ENST00000521835 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
DENND3-217ENST00000521835 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
DENND3-217ENST00000521835 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
DENND3-217ENST00000521835 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
DENND3-217ENST00000521835 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
DENND3-217ENST00000521835 C9orf84Q5VXU9 1444 aa16.49■□□□□ 0.23
DENND3-217ENST00000521835 CC2D1BQ5T0F9 858 aaKnown RBP16.47■□□□□ 0.23
DENND3-217ENST00000521835 PPP4R2Q9NY27 417 aa16.47■□□□□ 0.23
DENND3-217ENST00000521835 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
DENND3-217ENST00000521835 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.23
DENND3-217ENST00000521835 PTPRGP23470 1445 aa16.46■□□□□ 0.23
DENND3-217ENST00000521835 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
DENND3-217ENST00000521835 ATP10BO94823 1461 aa16.44■□□□□ 0.22
DENND3-217ENST00000521835 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
DENND3-217ENST00000521835 MSH5O43196 834 aa16.42■□□□□ 0.22
DENND3-217ENST00000521835 SPATA31E1Q6ZUB1 1445 aa16.42■□□□□ 0.22
DENND3-217ENST00000521835 CCDC136Q96JN2 1154 aa16.42■□□□□ 0.22
DENND3-217ENST00000521835 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
DENND3-217ENST00000521835 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
DENND3-217ENST00000521835 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
DENND3-217ENST00000521835 BCORL1Q5H9F3 1711 aa16.35■□□□□ 0.21
DENND3-217ENST00000521835 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
DENND3-217ENST00000521835 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
DENND3-217ENST00000521835 EIF5BO60841 1220 aaKnown RBP16.34■□□□□ 0.21
DENND3-217ENST00000521835 PNISRQ8TF01 805 aaKnown RBP16.34■□□□□ 0.21
DENND3-217ENST00000521835 NUP160Q12769 1436 aa16.34■□□□□ 0.21
DENND3-217ENST00000521835 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.21
DENND3-217ENST00000521835 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
DENND3-217ENST00000521835 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
DENND3-217ENST00000521835 CDCA7LQ96GN5 454 aa16.3■□□□□ 0.2
DENND3-217ENST00000521835 NBR1Q14596 966 aa16.3■□□□□ 0.2
DENND3-217ENST00000521835 PLIN1O60240 522 aa16.29■□□□□ 0.2
DENND3-217ENST00000521835 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms