RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 KIF21BO75037 1637 aa19.02■□□□□ 0.64
CSMD1-210ENST00000521646 AKT1S1Q96B36 256 aa19.01■□□□□ 0.63
CSMD1-210ENST00000521646 ILDR1Q86SU0 546 aaPredicted RBP19■□□□□ 0.63
CSMD1-210ENST00000521646 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
CSMD1-210ENST00000521646 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
CSMD1-210ENST00000521646 FRMPD1Q5SYB0 1578 aa18.93■□□□□ 0.62
CSMD1-210ENST00000521646 RAPGEF6Q8TEU7 1601 aa18.93■□□□□ 0.62
CSMD1-210ENST00000521646 NUP153P49790 1475 aaKnown RBP18.93■□□□□ 0.62
CSMD1-210ENST00000521646 SPDYE2BA6NHP3 402 aa18.93■□□□□ 0.62
CSMD1-210ENST00000521646 SPDYE6P0CI01 402 aa18.93■□□□□ 0.62
CSMD1-210ENST00000521646 SPDYE2Q495Y8 402 aa18.93■□□□□ 0.62
CSMD1-210ENST00000521646 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.61
CSMD1-210ENST00000521646 RAPGEF3O95398 923 aa18.88■□□□□ 0.61
CSMD1-210ENST00000521646 ADAMTSL3P82987 1691 aa18.86■□□□□ 0.61
CSMD1-210ENST00000521646 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
CSMD1-210ENST00000521646 ZNF692Q9BU19 519 aaPredicted RBP18.85■□□□□ 0.61
CSMD1-210ENST00000521646 REM2Q8IYK8 340 aaPredicted RBP18.83■□□□□ 0.6
CSMD1-210ENST00000521646 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.6
CSMD1-210ENST00000521646 NEO1Q92859 1461 aa18.8■□□□□ 0.6
CSMD1-210ENST00000521646 PTPRMP28827 1452 aa18.79■□□□□ 0.6
CSMD1-210ENST00000521646 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
CSMD1-210ENST00000521646 TTC37Q6PGP7 1564 aa18.78■□□□□ 0.6
CSMD1-210ENST00000521646 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.6
CSMD1-210ENST00000521646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.77■□□□□ 0.6
CSMD1-210ENST00000521646 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
CSMD1-210ENST00000521646 RICTORQ6R327 1708 aa18.77■□□□□ 0.59
CSMD1-210ENST00000521646 CHRDL2Q6WN34 429 aa18.75■□□□□ 0.59
CSMD1-210ENST00000521646 CDK13Q14004 1512 aaKnown RBP18.74■□□□□ 0.59
CSMD1-210ENST00000521646 PHLDB1Q86UU1 1377 aa18.74■□□□□ 0.59
CSMD1-210ENST00000521646 ARHGEF40Q8TER5 1519 aa18.74■□□□□ 0.59
CSMD1-210ENST00000521646 EEA1Q15075 1411 aa18.73■□□□□ 0.59
CSMD1-210ENST00000521646 POTEHQ6S545 545 aa18.71■□□□□ 0.59
CSMD1-210ENST00000521646 AKNAQ7Z591 1439 aa18.7■□□□□ 0.58
CSMD1-210ENST00000521646 YEATS2Q9ULM3 1422 aa18.69■□□□□ 0.58
CSMD1-210ENST00000521646 FANCAO15360 1455 aa18.69■□□□□ 0.58
CSMD1-210ENST00000521646 SSUH2Q9Y2M2 353 aa18.68■□□□□ 0.58
CSMD1-210ENST00000521646 LMTK3Q96Q04 1460 aa18.68■□□□□ 0.58
CSMD1-210ENST00000521646 EFCAB5A4FU69 1503 aa18.68■□□□□ 0.58
CSMD1-210ENST00000521646 RIMS1Q86UR5 1692 aaKnown RBP18.67■□□□□ 0.58
CSMD1-210ENST00000521646 DENND4BO75064 1496 aaPredicted RBP18.67■□□□□ 0.58
CSMD1-210ENST00000521646 ZMYM4Q5VZL5 1548 aa18.65■□□□□ 0.58
CSMD1-210ENST00000521646 PCF11O94913 1555 aaKnown RBP18.64■□□□□ 0.58
CSMD1-210ENST00000521646 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
CSMD1-210ENST00000521646 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
CSMD1-210ENST00000521646 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
CSMD1-210ENST00000521646 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
CSMD1-210ENST00000521646 KIF14Q15058 1648 aa18.61■□□□□ 0.57
CSMD1-210ENST00000521646 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
CSMD1-210ENST00000521646 PITPNM1O00562 1244 aa18.6■□□□□ 0.57
CSMD1-210ENST00000521646 CFAP74Q9C0B2 1584 aa18.59■□□□□ 0.57
CSMD1-210ENST00000521646 ZFYVE16Q7Z3T8 1539 aa18.59■□□□□ 0.57
CSMD1-210ENST00000521646 PLCH2O75038 1416 aa18.57■□□□□ 0.56
CSMD1-210ENST00000521646 POGZQ7Z3K3 1410 aa18.57■□□□□ 0.56
CSMD1-210ENST00000521646 HSPA2P54652 639 aa18.56■□□□□ 0.56
CSMD1-210ENST00000521646 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
CSMD1-210ENST00000521646 CLEC11AQ9Y240 323 aa18.54■□□□□ 0.56
CSMD1-210ENST00000521646 SPDYE1Q8NFV5 336 aaPredicted RBP18.52■□□□□ 0.56
CSMD1-210ENST00000521646 MYO5CQ9NQX4 1742 aa18.52■□□□□ 0.55
CSMD1-210ENST00000521646 SPDYE4A6NLX3 237 aa18.51■□□□□ 0.55
CSMD1-210ENST00000521646 FBXO41Q8TF61 875 aa18.51■□□□□ 0.55
CSMD1-210ENST00000521646 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
CSMD1-210ENST00000521646 ARHGEF12Q9NZN5 1544 aa18.5■□□□□ 0.55
CSMD1-210ENST00000521646 MLECQ14165 292 aa18.5■□□□□ 0.55
CSMD1-210ENST00000521646 MAGI2Q86UL8 1455 aa18.5■□□□□ 0.55
CSMD1-210ENST00000521646 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
CSMD1-210ENST00000521646 FMN1Q68DA7 1419 aa18.48■□□□□ 0.55
CSMD1-210ENST00000521646 KDM5CP41229 1560 aa18.47■□□□□ 0.55
CSMD1-210ENST00000521646 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
CSMD1-210ENST00000521646 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
CSMD1-210ENST00000521646 CDC42BPBQ9Y5S2 1711 aa18.46■□□□□ 0.55
CSMD1-210ENST00000521646 ATP10AO60312 1499 aa18.46■□□□□ 0.54
CSMD1-210ENST00000521646 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
CSMD1-210ENST00000521646 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
CSMD1-210ENST00000521646 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
CSMD1-210ENST00000521646 DIP2CQ9Y2E4 1556 aa18.43■□□□□ 0.54
CSMD1-210ENST00000521646 ABCA6Q8N139 1617 aa18.42■□□□□ 0.54
CSMD1-210ENST00000521646 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
CSMD1-210ENST00000521646 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
CSMD1-210ENST00000521646 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
CSMD1-210ENST00000521646 ZNF518AQ6AHZ1 1483 aa18.39■□□□□ 0.53
CSMD1-210ENST00000521646 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
CSMD1-210ENST00000521646 PIP4P2Q8N4L2 257 aa18.38■□□□□ 0.53
CSMD1-210ENST00000521646 ABCC1P33527 1531 aa18.38■□□□□ 0.53
CSMD1-210ENST00000521646 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
CSMD1-210ENST00000521646 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
CSMD1-210ENST00000521646 ITSN2Q9NZM3 1697 aa18.35■□□□□ 0.53
CSMD1-210ENST00000521646 CDC42BPAQ5VT25 1732 aa18.35■□□□□ 0.53
CSMD1-210ENST00000521646 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
CSMD1-210ENST00000521646 FXR2P51116 673 aaKnown RBP eCLIP18.34■□□□□ 0.53
CSMD1-210ENST00000521646 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
CSMD1-210ENST00000521646 REREQ9P2R6 1566 aa18.34■□□□□ 0.53
CSMD1-210ENST00000521646 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.52
CSMD1-210ENST00000521646 C3P01024 1663 aa18.32■□□□□ 0.52
CSMD1-210ENST00000521646 CLIP1P30622 1438 aa18.31■□□□□ 0.52
CSMD1-210ENST00000521646 CDK11AQ9UQ88 783 aaPredicted RBP18.3■□□□□ 0.52
CSMD1-210ENST00000521646 SAMD9LQ8IVG5 1584 aa18.3■□□□□ 0.52
CSMD1-210ENST00000521646 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
CSMD1-210ENST00000521646 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
CSMD1-210ENST00000521646 AGLP35573 1532 aa18.28■□□□□ 0.52
CSMD1-210ENST00000521646 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms