RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 EFCAB2Q5VUJ9 269 aa24.57■■□□□ 1.52
PRKDC-204ENST00000521331 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
PRKDC-204ENST00000521331 LMTK3Q96Q04 1460 aa24.56■■□□□ 1.52
PRKDC-204ENST00000521331 RIMS1Q86UR5 1692 aaKnown RBP24.54■■□□□ 1.52
PRKDC-204ENST00000521331 FBXO41Q8TF61 875 aa24.52■■□□□ 1.52
PRKDC-204ENST00000521331 TROQ12816 1431 aaPredicted RBP24.51■■□□□ 1.51
PRKDC-204ENST00000521331 CLIP1P30622 1438 aa24.5■■□□□ 1.51
PRKDC-204ENST00000521331 ATP10AO60312 1499 aa24.48■■□□□ 1.51
PRKDC-204ENST00000521331 MLECQ14165 292 aa24.48■■□□□ 1.51
PRKDC-204ENST00000521331 KIF14Q15058 1648 aa24.48■■□□□ 1.51
PRKDC-204ENST00000521331 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
PRKDC-204ENST00000521331 C9orf84Q5VXU9 1444 aa24.46■■□□□ 1.51
PRKDC-204ENST00000521331 SIGLEC1Q9BZZ2 1709 aa24.46■■□□□ 1.51
PRKDC-204ENST00000521331 ZNF518AQ6AHZ1 1483 aa24.45■■□□□ 1.51
PRKDC-204ENST00000521331 PLPPR3Q6T4P5 718 aa24.45■■□□□ 1.5
PRKDC-204ENST00000521331 ARHGAP5Q13017 1502 aa24.43■■□□□ 1.5
PRKDC-204ENST00000521331 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
PRKDC-204ENST00000521331 HSPA2P54652 639 aa24.4■■□□□ 1.5
PRKDC-204ENST00000521331 AFAP1Q8N556 730 aa24.39■■□□□ 1.49
PRKDC-204ENST00000521331 FER1L4A9Z1Z3 1794 aa24.38■■□□□ 1.49
PRKDC-204ENST00000521331 CCDC18Q5T9S5 1454 aa24.38■■□□□ 1.49
PRKDC-204ENST00000521331 KDM5CP41229 1560 aa24.37■■□□□ 1.49
PRKDC-204ENST00000521331 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
PRKDC-204ENST00000521331 MYT1LQ9UL68 1186 aa24.35■■□□□ 1.49
PRKDC-204ENST00000521331 LRRIQ1Q96JM4 1722 aa24.32■■□□□ 1.48
PRKDC-204ENST00000521331 MLH3Q9UHC1 1453 aa24.31■■□□□ 1.48
PRKDC-204ENST00000521331 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
PRKDC-204ENST00000521331 DIP2CQ9Y2E4 1556 aa24.28■■□□□ 1.48
PRKDC-204ENST00000521331 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
PRKDC-204ENST00000521331 CEBPAP49715 358 aaPredicted RBP24.27■■□□□ 1.48
PRKDC-204ENST00000521331 CDC42BPBQ9Y5S2 1711 aa24.27■■□□□ 1.48
PRKDC-204ENST00000521331 FYCO1Q9BQS8 1478 aa24.26■■□□□ 1.47
PRKDC-204ENST00000521331 ABCC1P33527 1531 aa24.26■■□□□ 1.47
PRKDC-204ENST00000521331 TRAPPC8Q9Y2L5 1435 aa24.26■■□□□ 1.47
PRKDC-204ENST00000521331 PREX1Q8TCU6 1659 aa24.23■■□□□ 1.47
PRKDC-204ENST00000521331 ABCA6Q8N139 1617 aa24.22■■□□□ 1.47
PRKDC-204ENST00000521331 AGLP35573 1532 aa24.22■■□□□ 1.47
PRKDC-204ENST00000521331 UHRF1BP1Q6BDS2 1440 aa24.21■■□□□ 1.47
PRKDC-204ENST00000521331 CERKQ8TCT0 537 aa24.2■■□□□ 1.46
PRKDC-204ENST00000521331 ESF1Q9H501 851 aaKnown RBP24.2■■□□□ 1.46
PRKDC-204ENST00000521331 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
PRKDC-204ENST00000521331 DMRT2Q9Y5R5 561 aa24.18■■□□□ 1.46
PRKDC-204ENST00000521331 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
PRKDC-204ENST00000521331 CDC42BPAQ5VT25 1732 aa24.14■■□□□ 1.45
PRKDC-204ENST00000521331 CNTLNQ9NXG0 1405 aa24.14■■□□□ 1.45
PRKDC-204ENST00000521331 GPATCH8Q9UKJ3 1502 aaKnown RBP24.14■■□□□ 1.45
PRKDC-204ENST00000521331 SETD1BQ9UPS6 1966 aaKnown RBP24.12■■□□□ 1.45
PRKDC-204ENST00000521331 KIDINS220Q9ULH0 1771 aa24.12■■□□□ 1.45
PRKDC-204ENST00000521331 SAMD9LQ8IVG5 1584 aa24.12■■□□□ 1.45
PRKDC-204ENST00000521331 SPAG9O60271 1321 aaKnown RBP24.1■■□□□ 1.45
PRKDC-204ENST00000521331 SYCP2Q9BX26 1530 aa24.1■■□□□ 1.45
PRKDC-204ENST00000521331 KIAA1107Q9UPP5 1409 aa24.1■■□□□ 1.45
PRKDC-204ENST00000521331 PLEKHH2Q8IVE3 1493 aa24.09■■□□□ 1.45
PRKDC-204ENST00000521331 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
PRKDC-204ENST00000521331 HNRNPMP52272 730 aaKnown RBP eCLIP24.08■■□□□ 1.45
PRKDC-204ENST00000521331 C3P01024 1663 aa24.08■■□□□ 1.44
PRKDC-204ENST00000521331 CCNB3Q8WWL7 1395 aa24.07■■□□□ 1.44
PRKDC-204ENST00000521331 MTUS2Q5JR59 1369 aa24.05■■□□□ 1.44
PRKDC-204ENST00000521331 STRCQ7RTU9 1775 aa24.05■■□□□ 1.44
PRKDC-204ENST00000521331 PTPRTO14522 1441 aa24.04■■□□□ 1.44
PRKDC-204ENST00000521331 NPATQ14207 1427 aa24.02■■□□□ 1.44
PRKDC-204ENST00000521331 ATP7AQ04656 1500 aa24.01■■□□□ 1.43
PRKDC-204ENST00000521331 ZMYM3Q14202 1370 aa23.99■■□□□ 1.43
PRKDC-204ENST00000521331 A2MP01023 1474 aa23.98■■□□□ 1.43
PRKDC-204ENST00000521331 MROH2AA6NES4 1674 aa23.97■■□□□ 1.43
PRKDC-204ENST00000521331 NCOA1Q15788 1441 aa23.97■■□□□ 1.43
PRKDC-204ENST00000521331 INO80Q9ULG1 1556 aaPredicted RBP23.97■■□□□ 1.43
PRKDC-204ENST00000521331 PLXNC1O60486 1568 aa23.96■■□□□ 1.43
PRKDC-204ENST00000521331 EHBP1L1Q8N3D4 1523 aa23.94■■□□□ 1.42
PRKDC-204ENST00000521331 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
PRKDC-204ENST00000521331 SUPT6HQ7KZ85 1726 aaKnown RBP23.93■■□□□ 1.42
PRKDC-204ENST00000521331 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
PRKDC-204ENST00000521331 GGT6Q6P531 493 aa23.91■■□□□ 1.42
PRKDC-204ENST00000521331 TIAM1Q13009 1591 aa23.91■■□□□ 1.42
PRKDC-204ENST00000521331 ZNF644Q9H582 1327 aaPredicted RBP23.9■■□□□ 1.42
PRKDC-204ENST00000521331 MBD5Q9P267 1494 aa23.89■■□□□ 1.42
PRKDC-204ENST00000521331 RTEL1-TNFRSF6BF6WH68 1400 aa23.88■■□□□ 1.41
PRKDC-204ENST00000521331 CAMSAP1Q5T5Y3 1602 aa23.88■■□□□ 1.41
PRKDC-204ENST00000521331 PTPRKQ15262 1439 aa23.86■■□□□ 1.41
PRKDC-204ENST00000521331 CLTCQ00610 1675 aaKnown RBP23.86■■□□□ 1.41
PRKDC-204ENST00000521331 LTBP4Q8N2S1 1624 aa23.85■■□□□ 1.41
PRKDC-204ENST00000521331 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
PRKDC-204ENST00000521331 ADGBQ8N7X0 1667 aa23.85■■□□□ 1.41
PRKDC-204ENST00000521331 DHX29Q7Z478 1369 aaKnown RBP23.83■■□□□ 1.41
PRKDC-204ENST00000521331 PLA2R1Q13018 1463 aa23.82■■□□□ 1.4
PRKDC-204ENST00000521331 PKD2Q13563 968 aa23.82■■□□□ 1.4
PRKDC-204ENST00000521331 NCKAP5LQ9HCH0 1330 aa23.82■■□□□ 1.4
PRKDC-204ENST00000521331 RSPH4AQ5TD94 716 aa23.81■■□□□ 1.4
PRKDC-204ENST00000521331 MYO3AQ8NEV4 1616 aa23.81■■□□□ 1.4
PRKDC-204ENST00000521331 ZNF142P52746 1687 aaPredicted RBP23.79■■□□□ 1.4
PRKDC-204ENST00000521331 CEP170BQ9Y4F5 1589 aaPredicted RBP23.79■■□□□ 1.4
PRKDC-204ENST00000521331 NCOA2Q15596 1464 aa23.79■■□□□ 1.4
PRKDC-204ENST00000521331 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
PRKDC-204ENST00000521331 TCOF1Q13428 1488 aaKnown RBP23.76■■□□□ 1.39
PRKDC-204ENST00000521331 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
PRKDC-204ENST00000521331 KIF3BO15066 747 aa23.75■■□□□ 1.39
PRKDC-204ENST00000521331 DISP3Q9P2K9 1392 aa23.74■■□□□ 1.39
PRKDC-204ENST00000521331 A2ML1A8K2U0 1454 aa23.74■■□□□ 1.39
PRKDC-204ENST00000521331 ZNF335Q9H4Z2 1342 aaPredicted RBP23.73■■□□□ 1.39
PRKDC-204ENST00000521331 FAM135AQ9P2D6 1515 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms