RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-208ENST00000521037 GPR153Q6NV75 609 aa9.18□□□□□ -0.94
VPS13B-208ENST00000521037 ZFP91Q96JP5 570 aaPredicted RBP9.18□□□□□ -0.94
VPS13B-208ENST00000521037 NACADO15069 1562 aa9.17□□□□□ -0.94
VPS13B-208ENST00000521037 ERBB3P21860 1342 aa9.17□□□□□ -0.94
VPS13B-208ENST00000521037 ZSWIM6Q9HCJ5 1215 aa9.16□□□□□ -0.94
VPS13B-208ENST00000521037 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
VPS13B-208ENST00000521037 CECR2Q9BXF3 1484 aa9.15□□□□□ -0.95
VPS13B-208ENST00000521037 VGFO15240 615 aaPredicted RBP9.14□□□□□ -0.95
VPS13B-208ENST00000521037 VARS2Q5ST30 1063 aaKnown RBP9.13□□□□□ -0.95
VPS13B-208ENST00000521037 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
VPS13B-208ENST00000521037 FBXO22Q8NEZ5 403 aa9.12□□□□□ -0.95
VPS13B-208ENST00000521037 CC2D2AQ9P2K1 1620 aa9.12□□□□□ -0.95
VPS13B-208ENST00000521037 RIMBP2O15034 1052 aa9.11□□□□□ -0.95
VPS13B-208ENST00000521037 KIF3CO14782 793 aa9.06□□□□□ -0.96
VPS13B-208ENST00000521037 ARSIQ5FYB1 569 aa9.06□□□□□ -0.96
VPS13B-208ENST00000521037 NLRP6P59044 892 aa9.05□□□□□ -0.96
VPS13B-208ENST00000521037 MFRPQ9BY79 579 aa9.05□□□□□ -0.96
VPS13B-208ENST00000521037 KHSRPQ92945 711 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS13B-208ENST00000521037 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-208ENST00000521037 BCL11BQ9C0K0 894 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-208ENST00000521037 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
VPS13B-208ENST00000521037 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
VPS13B-208ENST00000521037 EIF4G1Q04637 1599 aaKnown RBP8.99□□□□□ -0.97
VPS13B-208ENST00000521037 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
VPS13B-208ENST00000521037 POTEEQ6S8J3 1075 aa8.97□□□□□ -0.97
VPS13B-208ENST00000521037 STK24Q9Y6E0 443 aa8.97□□□□□ -0.97
VPS13B-208ENST00000521037 SLC34A2O95436 690 aa8.95□□□□□ -0.98
VPS13B-208ENST00000521037 PTGER2P43116 358 aa8.95□□□□□ -0.98
VPS13B-208ENST00000521037 SHROOM4Q9ULL8 1493 aa8.95□□□□□ -0.98
VPS13B-208ENST00000521037 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
VPS13B-208ENST00000521037 TAOK2Q9UL54 1235 aa8.94□□□□□ -0.98
VPS13B-208ENST00000521037 LSM11P83369 360 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS13B-208ENST00000521037 KDM4FA0A1W2PPD8 638 aa8.92□□□□□ -0.98
VPS13B-208ENST00000521037 STK25O00506 426 aa8.92□□□□□ -0.98
VPS13B-208ENST00000521037 PKD2Q13563 968 aa8.92□□□□□ -0.98
VPS13B-208ENST00000521037 ANKRD13DQ6ZTN6 518 aa8.92□□□□□ -0.98
VPS13B-208ENST00000521037 CUX2O14529 1486 aa8.91□□□□□ -0.98
VPS13B-208ENST00000521037 NUDT7P0C024 238 aa8.91□□□□□ -0.98
VPS13B-208ENST00000521037 LHX6Q9UPM6 363 aa8.9□□□□□ -0.98
VPS13B-208ENST00000521037 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
VPS13B-208ENST00000521037 RGL2O15211 777 aa8.89□□□□□ -0.99
VPS13B-208ENST00000521037 PPP1R37O75864 691 aa8.89□□□□□ -0.99
VPS13B-208ENST00000521037 ECM2O94769 699 aaPredicted RBP8.88□□□□□ -0.99
VPS13B-208ENST00000521037 PBX2P40425 430 aa8.87□□□□□ -0.99
VPS13B-208ENST00000521037 AXIN2Q9Y2T1 843 aa8.86□□□□□ -0.99
VPS13B-208ENST00000521037 DCAF8L2P0C7V8 631 aa8.83□□□□□ -1
VPS13B-208ENST00000521037 PTCD2Q8WV60 388 aaKnown RBP8.82□□□□□ -1
VPS13B-208ENST00000521037 TMC2Q8TDI7 906 aa8.81□□□□□ -1
VPS13B-208ENST00000521037 ARHGAP33O14559 1287 aa8.78□□□□□ -1
VPS13B-208ENST00000521037 FOXK1P85037 733 aa8.78□□□□□ -1
VPS13B-208ENST00000521037 HRO43593 1189 aa8.77□□□□□ -1.01
VPS13B-208ENST00000521037 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1.01
VPS13B-208ENST00000521037 GPHNQ9NQX3 736 aaPredicted RBP8.75□□□□□ -1.01
VPS13B-208ENST00000521037 PSDA5PKW4 1024 aaPredicted RBP8.74□□□□□ -1.01
VPS13B-208ENST00000521037 TK2O00142 265 aa8.74□□□□□ -1.01
VPS13B-208ENST00000521037 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
VPS13B-208ENST00000521037 PLPP6Q8IY26 295 aa8.73□□□□□ -1.01
VPS13B-208ENST00000521037 HCSTQ9UBK5 93 aa8.73□□□□□ -1.01
VPS13B-208ENST00000521037 PSEN2P49810 448 aa8.72□□□□□ -1.01
VPS13B-208ENST00000521037 DSG2Q14126 1118 aa8.72□□□□□ -1.01
VPS13B-208ENST00000521037 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
VPS13B-208ENST00000521037 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
VPS13B-208ENST00000521037 SCRIBQ14160 1630 aa8.68□□□□□ -1.02
VPS13B-208ENST00000521037 OXER1Q8TDS5 423 aa8.66□□□□□ -1.02
VPS13B-208ENST00000521037 NKX1-1Q15270 411 aaPredicted RBP8.65□□□□□ -1.02
VPS13B-208ENST00000521037 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
VPS13B-208ENST00000521037 DCAF1Q9Y4B6 1507 aa8.64□□□□□ -1.03
VPS13B-208ENST00000521037 ERCC6Q03468 1493 aa8.63□□□□□ -1.03
VPS13B-208ENST00000521037 TBC1D12O60347 775 aa8.62□□□□□ -1.03
VPS13B-208ENST00000521037 CRISPLD2Q9H0B8 497 aa8.62□□□□□ -1.03
VPS13B-208ENST00000521037 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
VPS13B-208ENST00000521037 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
VPS13B-208ENST00000521037 BHMG1C9JSJ3 638 aaPredicted RBP8.6□□□□□ -1.03
VPS13B-208ENST00000521037 SLC4A5Q9BY07 1137 aa8.6□□□□□ -1.03
VPS13B-208ENST00000521037 NESP48681 1621 aa8.6□□□□□ -1.03
VPS13B-208ENST00000521037 ZCCHC6Q5VYS8 1495 aaKnown RBP8.59□□□□□ -1.03
VPS13B-208ENST00000521037 KCTD12Q96CX2 325 aaKnown RBP8.59□□□□□ -1.03
VPS13B-208ENST00000521037 KCNK17Q96T54 332 aa8.59□□□□□ -1.03
VPS13B-208ENST00000521037 ANO8Q9HCE9 1232 aaPredicted RBP8.59□□□□□ -1.03
VPS13B-208ENST00000521037 BCL2L12Q9HB09 334 aa8.58□□□□□ -1.04
VPS13B-208ENST00000521037 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
VPS13B-208ENST00000521037 CHGAP10645 457 aaKnown RBP8.56□□□□□ -1.04
VPS13B-208ENST00000521037 FOSBP53539 338 aa8.56□□□□□ -1.04
VPS13B-208ENST00000521037 NCAPD3P42695 1498 aa8.56□□□□□ -1.04
VPS13B-208ENST00000521037 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
VPS13B-208ENST00000521037 UPF1Q92900 1129 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS13B-208ENST00000521037 PPP1R15BQ5SWA1 713 aa8.53□□□□□ -1.04
VPS13B-208ENST00000521037 ZNF454Q8N9F8 522 aa8.53□□□□□ -1.04
VPS13B-208ENST00000521037 ZBED2Q9BTP6 218 aa8.53□□□□□ -1.04
VPS13B-208ENST00000521037 PTPN5P54829 565 aa8.49□□□□□ -1.05
VPS13B-208ENST00000521037 THSD4Q6ZMP0 1018 aa8.49□□□□□ -1.05
VPS13B-208ENST00000521037 STAC3Q96MF2 364 aa8.49□□□□□ -1.05
VPS13B-208ENST00000521037 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
VPS13B-208ENST00000521037 GTPBP6O43824 516 aaPredicted RBP8.48□□□□□ -1.05
VPS13B-208ENST00000521037 PDE4AP27815 886 aa8.48□□□□□ -1.05
VPS13B-208ENST00000521037 JPH4Q96JJ6 628 aa8.48□□□□□ -1.05
VPS13B-208ENST00000521037 KCNH8Q96L42 1107 aa8.48□□□□□ -1.05
VPS13B-208ENST00000521037 RYDENQ9NUL5 291 aaKnown RBP8.48□□□□□ -1.05
VPS13B-208ENST00000521037 EVI5O60447 810 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms