RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 NLRP6P59044 892 aa10.73□□□□□ -0.69
FAM49B-218ENST00000520887 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
FAM49B-218ENST00000520887 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
FAM49B-218ENST00000520887 SMARCA2P51531 1590 aa10.73□□□□□ -0.69
FAM49B-218ENST00000520887 CECR2Q9BXF3 1484 aa10.72□□□□□ -0.69
FAM49B-218ENST00000520887 MICALL2Q8IY33 904 aa10.69□□□□□ -0.7
FAM49B-218ENST00000520887 FBXO22Q8NEZ5 403 aa10.68□□□□□ -0.7
FAM49B-218ENST00000520887 PCDH10Q9P2E7 1040 aa10.68□□□□□ -0.7
FAM49B-218ENST00000520887 AMER1Q5JTC6 1135 aaPredicted RBP10.67□□□□□ -0.7
FAM49B-218ENST00000520887 MFRPQ9BY79 579 aa10.67□□□□□ -0.7
FAM49B-218ENST00000520887 HMGXB3Q12766 1538 aa10.64□□□□□ -0.71
FAM49B-218ENST00000520887 BAZ1BQ9UIG0 1483 aaKnown RBP10.64□□□□□ -0.71
FAM49B-218ENST00000520887 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
FAM49B-218ENST00000520887 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
FAM49B-218ENST00000520887 MROH2BQ7Z745 1585 aa10.63□□□□□ -0.71
FAM49B-218ENST00000520887 PEG3Q9GZU2 1588 aa10.62□□□□□ -0.71
FAM49B-218ENST00000520887 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
FAM49B-218ENST00000520887 TMEM92Q6UXU6 159 aa10.6□□□□□ -0.71
FAM49B-218ENST00000520887 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
FAM49B-218ENST00000520887 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
FAM49B-218ENST00000520887 MARVELD3Q96A59 401 aa10.58□□□□□ -0.72
FAM49B-218ENST00000520887 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
FAM49B-218ENST00000520887 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
FAM49B-218ENST00000520887 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
FAM49B-218ENST00000520887 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
FAM49B-218ENST00000520887 WIZO95785 1651 aa10.55□□□□□ -0.72
FAM49B-218ENST00000520887 RSF1Q96T23 1441 aaPredicted RBP10.55□□□□□ -0.72
FAM49B-218ENST00000520887 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
FAM49B-218ENST00000520887 EMP3P54852 163 aa10.53□□□□□ -0.72
FAM49B-218ENST00000520887 RIMBP2O15034 1052 aa10.51□□□□□ -0.73
FAM49B-218ENST00000520887 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
FAM49B-218ENST00000520887 PPP1R37O75864 691 aa10.5□□□□□ -0.73
FAM49B-218ENST00000520887 HOXB1P14653 301 aaPredicted RBP10.49□□□□□ -0.73
FAM49B-218ENST00000520887 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
FAM49B-218ENST00000520887 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
FAM49B-218ENST00000520887 C2orf72A6NCS6 295 aa10.46□□□□□ -0.73
FAM49B-218ENST00000520887 KIF3CO14782 793 aa10.45□□□□□ -0.74
FAM49B-218ENST00000520887 ZSWIM6Q9HCJ5 1215 aa10.45□□□□□ -0.74
FAM49B-218ENST00000520887 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
FAM49B-218ENST00000520887 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
FAM49B-218ENST00000520887 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
FAM49B-218ENST00000520887 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
FAM49B-218ENST00000520887 POTEB3A0JP26 581 aa10.42□□□□□ -0.74
FAM49B-218ENST00000520887 POTEBQ6S5H4 581 aa10.42□□□□□ -0.74
FAM49B-218ENST00000520887 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
FAM49B-218ENST00000520887 GPR153Q6NV75 609 aa10.41□□□□□ -0.74
FAM49B-218ENST00000520887 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.74
FAM49B-218ENST00000520887 ERBB3P21860 1342 aa10.4□□□□□ -0.74
FAM49B-218ENST00000520887 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
FAM49B-218ENST00000520887 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
FAM49B-218ENST00000520887 PDS5BQ9NTI5 1447 aa10.34□□□□□ -0.75
FAM49B-218ENST00000520887 SLC34A2O95436 690 aa10.33□□□□□ -0.76
FAM49B-218ENST00000520887 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
FAM49B-218ENST00000520887 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.762e-8■□□□□ 10.5
FAM49B-218ENST00000520887 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
FAM49B-218ENST00000520887 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
FAM49B-218ENST00000520887 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
FAM49B-218ENST00000520887 GPHNQ9NQX3 736 aaPredicted RBP10.32□□□□□ -0.76
FAM49B-218ENST00000520887 CCDC88BA6NC98 1476 aa10.31□□□□□ -0.76
FAM49B-218ENST00000520887 PRDM2Q13029 1718 aa10.31□□□□□ -0.76
FAM49B-218ENST00000520887 GTPBP6O43824 516 aaPredicted RBP10.31□□□□□ -0.76
FAM49B-218ENST00000520887 FOXK1P85037 733 aa10.31□□□□□ -0.76
FAM49B-218ENST00000520887 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
FAM49B-218ENST00000520887 PCDHGA4Q9Y5G9 962 aa10.29□□□□□ -0.76
FAM49B-218ENST00000520887 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
FAM49B-218ENST00000520887 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
FAM49B-218ENST00000520887 NESP48681 1621 aa10.28□□□□□ -0.76
FAM49B-218ENST00000520887 CFTRP13569 1480 aa10.28□□□□□ -0.76
FAM49B-218ENST00000520887 NUDT7P0C024 238 aa10.27□□□□□ -0.77
FAM49B-218ENST00000520887 DSG2Q14126 1118 aa10.27□□□□□ -0.77
FAM49B-218ENST00000520887 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
FAM49B-218ENST00000520887 CEP164Q9UPV0 1460 aa10.27□□□□□ -0.77
FAM49B-218ENST00000520887 FANCD2Q9BXW9 1451 aa10.24□□□□□ -0.77
FAM49B-218ENST00000520887 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
FAM49B-218ENST00000520887 KIF21AQ7Z4S6 1674 aa10.23□□□□□ -0.77
FAM49B-218ENST00000520887 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
FAM49B-218ENST00000520887 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
FAM49B-218ENST00000520887 PDE4AP27815 886 aa10.21□□□□□ -0.77
FAM49B-218ENST00000520887 LHX6Q9UPM6 363 aa10.21□□□□□ -0.77
FAM49B-218ENST00000520887 TBC1D12O60347 775 aa10.2□□□□□ -0.78
FAM49B-218ENST00000520887 MRC2Q9UBG0 1479 aa10.2□□□□□ -0.78
FAM49B-218ENST00000520887 CUX2O14529 1486 aa10.19□□□□□ -0.78
FAM49B-218ENST00000520887 NCKAP5LQ9HCH0 1330 aa10.18□□□□□ -0.78
FAM49B-218ENST00000520887 ABCC8Q09428 1581 aa10.18□□□□□ -0.78
FAM49B-218ENST00000520887 PPP1R15BQ5SWA1 713 aa10.17□□□□□ -0.78
FAM49B-218ENST00000520887 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
FAM49B-218ENST00000520887 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
FAM49B-218ENST00000520887 THOC2Q8NI27 1593 aaKnown RBP10.16□□□□□ -0.78
FAM49B-218ENST00000520887 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
FAM49B-218ENST00000520887 PSDA5PKW4 1024 aaPredicted RBP10.14□□□□□ -0.79
FAM49B-218ENST00000520887 WDR62O43379 1518 aa10.13□□□□□ -0.79
FAM49B-218ENST00000520887 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
FAM49B-218ENST00000520887 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.79
FAM49B-218ENST00000520887 PBX2P40425 430 aa10.12□□□□□ -0.79
FAM49B-218ENST00000520887 DDX27Q96GQ7 796 aaKnown RBP10.12□□□□□ -0.79
FAM49B-218ENST00000520887 ANKRD13DQ6ZTN6 518 aa10.11□□□□□ -0.79
FAM49B-218ENST00000520887 DNMBPQ6XZF7 1577 aa10.1□□□□□ -0.79
FAM49B-218ENST00000520887 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
FAM49B-218ENST00000520887 MFSD10Q14728 455 aa10.09□□□□□ -0.79
FAM49B-218ENST00000520887 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms