RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 EPRSP07814 1512 aaKnown RBP8.8□□□□□ -1
CTNNA1-220ENST00000520260 DIP2BQ9P265 1576 aa8.79□□□□□ -1
CTNNA1-220ENST00000520260 SLC4A2P04920 1241 aa8.79□□□□□ -1
CTNNA1-220ENST00000520260 AKT1S1Q96B36 256 aa8.79□□□□□ -1
CTNNA1-220ENST00000520260 VPS8Q8N3P4 1428 aa8.79□□□□□ -1
CTNNA1-220ENST00000520260 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
CTNNA1-220ENST00000520260 ATP10BO94823 1461 aa8.78□□□□□ -1
CTNNA1-220ENST00000520260 KIF14Q15058 1648 aa8.78□□□□□ -1
CTNNA1-220ENST00000520260 CFAP43Q8NDM7 1665 aa8.78□□□□□ -1
CTNNA1-220ENST00000520260 MTUS2Q5JR59 1369 aa8.77□□□□□ -1.01
CTNNA1-220ENST00000520260 KCNH8Q96L42 1107 aa8.77□□□□□ -1.01
CTNNA1-220ENST00000520260 PCF11O94913 1555 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-220ENST00000520260 TROQ12816 1431 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-220ENST00000520260 CD109Q6YHK3 1445 aa8.76□□□□□ -1.01
CTNNA1-220ENST00000520260 ARID3CA6NKF2 412 aa8.75□□□□□ -1.01
CTNNA1-220ENST00000520260 FXR2P51116 673 aaKnown RBP eCLIP8.75□□□□□ -1.011e-6■■□□□ 12.9
CTNNA1-220ENST00000520260 LOC105371045A0A1W2PR82 267 aa8.74□□□□□ -1.01
CTNNA1-220ENST00000520260 HRCP23327 699 aa8.74□□□□□ -1.01
CTNNA1-220ENST00000520260 REM2Q8IYK8 340 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-220ENST00000520260 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
CTNNA1-220ENST00000520260 MAGI3Q5TCQ9 1506 aa8.74□□□□□ -1.01
CTNNA1-220ENST00000520260 EHBP1L1Q8N3D4 1523 aa8.74□□□□□ -1.01
CTNNA1-220ENST00000520260 ABCA9Q8IUA7 1624 aa8.73□□□□□ -1.01
CTNNA1-220ENST00000520260 MAP3K4Q9Y6R4 1608 aa8.72□□□□□ -1.01
CTNNA1-220ENST00000520260 NEO1Q92859 1461 aa8.72□□□□□ -1.01
CTNNA1-220ENST00000520260 CDK13Q14004 1512 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-220ENST00000520260 ARAP3Q8WWN8 1544 aa8.72□□□□□ -1.01
CTNNA1-220ENST00000520260 KIF13AQ9H1H9 1805 aa8.72□□□□□ -1.01
CTNNA1-220ENST00000520260 EFCAB2Q5VUJ9 269 aa8.71□□□□□ -1.02
CTNNA1-220ENST00000520260 CCNB3Q8WWL7 1395 aa8.71□□□□□ -1.02
CTNNA1-220ENST00000520260 PLEKHH2Q8IVE3 1493 aa8.7□□□□□ -1.02
CTNNA1-220ENST00000520260 KDM6BO15054 1643 aa8.7□□□□□ -1.02
CTNNA1-220ENST00000520260 POLA2Q14181 598 aa8.7□□□□□ -1.02
CTNNA1-220ENST00000520260 FANCAO15360 1455 aa8.69□□□□□ -1.02
CTNNA1-220ENST00000520260 ARHGAP5Q13017 1502 aa8.69□□□□□ -1.02
CTNNA1-220ENST00000520260 TIAM1Q13009 1591 aa8.69□□□□□ -1.02
CTNNA1-220ENST00000520260 ITSN2Q9NZM3 1697 aa8.69□□□□□ -1.02
CTNNA1-220ENST00000520260 SUPT6HQ7KZ85 1726 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-220ENST00000520260 MYO5CQ9NQX4 1742 aa8.68□□□□□ -1.02
CTNNA1-220ENST00000520260 PLCH2O75038 1416 aa8.68□□□□□ -1.02
CTNNA1-220ENST00000520260 TSPOAP1O95153 1857 aa8.67□□□□□ -1.02
CTNNA1-220ENST00000520260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTNNA1-220ENST00000520260 PITPNM1O00562 1244 aa8.66□□□□□ -1.02
CTNNA1-220ENST00000520260 SAMD1Q6SPF0 538 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-220ENST00000520260 CFDP1Q9UEE9 299 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-220ENST00000520260 LRRC9Q6ZRR7 1453 aa8.65□□□□□ -1.02
CTNNA1-220ENST00000520260 RSPH4AQ5TD94 716 aa8.65□□□□□ -1.02
CTNNA1-220ENST00000520260 DENND4BO75064 1496 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-220ENST00000520260 ADGRL1O94910 1474 aa8.64□□□□□ -1.03
CTNNA1-220ENST00000520260 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
CTNNA1-220ENST00000520260 PREX2Q70Z35 1606 aa8.64□□□□□ -1.03
CTNNA1-220ENST00000520260 TTC37Q6PGP7 1564 aa8.64□□□□□ -1.03
CTNNA1-220ENST00000520260 ZNF518AQ6AHZ1 1483 aa8.64□□□□□ -1.03
CTNNA1-220ENST00000520260 MAGI2Q86UL8 1455 aa8.64□□□□□ -1.03
CTNNA1-220ENST00000520260 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
CTNNA1-220ENST00000520260 MIA2Q96PC5 1412 aa8.62□□□□□ -1.03
CTNNA1-220ENST00000520260 NCOA2Q15596 1464 aa8.61□□□□□ -1.03
CTNNA1-220ENST00000520260 POGZQ7Z3K3 1410 aa8.61□□□□□ -1.03
CTNNA1-220ENST00000520260 KIAA1107Q9UPP5 1409 aa8.61□□□□□ -1.03
CTNNA1-220ENST00000520260 LRRIQ1Q96JM4 1722 aa8.6□□□□□ -1.03
CTNNA1-220ENST00000520260 ZNF777Q9ULD5 760 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-220ENST00000520260 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
CTNNA1-220ENST00000520260 PPRC1Q5VV67 1664 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-220ENST00000520260 TSPY4P0CV99 314 aa8.59□□□□□ -1.03
CTNNA1-220ENST00000520260 TSPY10P0CW01 314 aa8.59□□□□□ -1.03
CTNNA1-220ENST00000520260 KCNA4P22459 653 aa8.59□□□□□ -1.03
CTNNA1-220ENST00000520260 MYOM3Q5VTT5 1437 aa8.59□□□□□ -1.03
CTNNA1-220ENST00000520260 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-220ENST00000520260 GABBR2O75899 941 aa8.57□□□□□ -1.04
CTNNA1-220ENST00000520260 ESF1Q9H501 851 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-220ENST00000520260 ABCC1P33527 1531 aa8.57□□□□□ -1.04
CTNNA1-220ENST00000520260 ZMYM4Q5VZL5 1548 aa8.57□□□□□ -1.04
CTNNA1-220ENST00000520260 ZFYVE16Q7Z3T8 1539 aa8.57□□□□□ -1.04
CTNNA1-220ENST00000520260 CDC42BPAQ5VT25 1732 aa8.57□□□□□ -1.04
CTNNA1-220ENST00000520260 SPAG9O60271 1321 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-220ENST00000520260 CCDC141Q6ZP82 1450 aa8.56□□□□□ -1.04
CTNNA1-220ENST00000520260 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-220ENST00000520260 HECW2Q9P2P5 1572 aa8.55□□□□□ -1.04
CTNNA1-220ENST00000520260 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 CDC42BPBQ9Y5S2 1711 aa8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 CAMSAP2Q08AD1 1489 aa8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 MLH3Q9UHC1 1453 aa8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 SYCP2Q9BX26 1530 aa8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 RTEL1-TNFRSF6BF6WH68 1400 aa8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 C9orf84Q5VXU9 1444 aa8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-220ENST00000520260 KDM5CP41229 1560 aa8.53□□□□□ -1.04
CTNNA1-220ENST00000520260 RAPGEF3O95398 923 aa8.53□□□□□ -1.04
CTNNA1-220ENST00000520260 RICTORQ6R327 1708 aa8.53□□□□□ -1.04
CTNNA1-220ENST00000520260 FGD6Q6ZV73 1430 aa8.53□□□□□ -1.04
CTNNA1-220ENST00000520260 ARHGEF5Q12774 1597 aa8.52□□□□□ -1.04
CTNNA1-220ENST00000520260 SAMD9LQ8IVG5 1584 aa8.52□□□□□ -1.05
CTNNA1-220ENST00000520260 ATP10AO60312 1499 aa8.51□□□□□ -1.05
CTNNA1-220ENST00000520260 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
CTNNA1-220ENST00000520260 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-220ENST00000520260 KANK4Q5T7N3 995 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-220ENST00000520260 PELP1Q8IZL8 1130 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-220ENST00000520260 ANKRD30AQ9BXX3 1397 aa8.5□□□□□ -1.05
CTNNA1-220ENST00000520260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNNA1-220ENST00000520260 ATP7AQ04656 1500 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms