RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
FBXO28-204ENST00000519894 DENND4BO75064 1496 aaPredicted RBP24.12■■□□□ 1.45
FBXO28-204ENST00000519894 RICTORQ6R327 1708 aa24.08■■□□□ 1.45
FBXO28-204ENST00000519894 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.45
FBXO28-204ENST00000519894 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
FBXO28-204ENST00000519894 CEP162Q5TB80 1403 aa24.07■■□□□ 1.44
FBXO28-204ENST00000519894 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
FBXO28-204ENST00000519894 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
FBXO28-204ENST00000519894 ARHGAP5Q13017 1502 aa23.99■■□□□ 1.43
FBXO28-204ENST00000519894 ZMYM4Q5VZL5 1548 aa23.99■■□□□ 1.43
FBXO28-204ENST00000519894 MAPK8IP2Q13387 824 aaPredicted RBP23.98■■□□□ 1.43
FBXO28-204ENST00000519894 POGZQ7Z3K3 1410 aa23.98■■□□□ 1.43
FBXO28-204ENST00000519894 CDC42BPBQ9Y5S2 1711 aa23.98■■□□□ 1.43
FBXO28-204ENST00000519894 ARHGEF40Q8TER5 1519 aa23.96■■□□□ 1.43
FBXO28-204ENST00000519894 YEATS2Q9ULM3 1422 aa23.94■■□□□ 1.42
FBXO28-204ENST00000519894 DMRT2Q9Y5R5 561 aa23.94■■□□□ 1.42
FBXO28-204ENST00000519894 PREX2Q70Z35 1606 aa23.94■■□□□ 1.42
FBXO28-204ENST00000519894 MAGI2Q86UL8 1455 aa23.94■■□□□ 1.42
FBXO28-204ENST00000519894 ZFYVE16Q7Z3T8 1539 aa23.92■■□□□ 1.42
FBXO28-204ENST00000519894 CDC42BPAQ5VT25 1732 aa23.91■■□□□ 1.42
FBXO28-204ENST00000519894 ARID4BQ4LE39 1312 aaPredicted RBP23.9■■□□□ 1.42
FBXO28-204ENST00000519894 ADAMTSL3P82987 1691 aa23.89■■□□□ 1.42
FBXO28-204ENST00000519894 AFAP1Q8N556 730 aa23.89■■□□□ 1.41
FBXO28-204ENST00000519894 BCORL1Q5H9F3 1711 aa23.88■■□□□ 1.41
FBXO28-204ENST00000519894 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
FBXO28-204ENST00000519894 GPATCH8Q9UKJ3 1502 aaKnown RBP23.87■■□□□ 1.41
FBXO28-204ENST00000519894 ZNF518AQ6AHZ1 1483 aa23.87■■□□□ 1.41
FBXO28-204ENST00000519894 ARHGEF12Q9NZN5 1544 aa23.86■■□□□ 1.41
FBXO28-204ENST00000519894 ABCC1P33527 1531 aa23.84■■□□□ 1.41
FBXO28-204ENST00000519894 SIGLEC1Q9BZZ2 1709 aa23.84■■□□□ 1.41
FBXO28-204ENST00000519894 KDM5CP41229 1560 aa23.84■■□□□ 1.41
FBXO28-204ENST00000519894 TRAPPC8Q9Y2L5 1435 aa23.83■■□□□ 1.4
FBXO28-204ENST00000519894 ATP10AO60312 1499 aa23.81■■□□□ 1.4
FBXO28-204ENST00000519894 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
FBXO28-204ENST00000519894 ITSN2Q9NZM3 1697 aa23.81■■□□□ 1.4
FBXO28-204ENST00000519894 ZNF777Q9ULD5 760 aaPredicted RBP23.81■■□□□ 1.4
FBXO28-204ENST00000519894 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
FBXO28-204ENST00000519894 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
FBXO28-204ENST00000519894 MADDQ8WXG6 1647 aa23.8■■□□□ 1.4
FBXO28-204ENST00000519894 PTPRMP28827 1452 aa23.8■■□□□ 1.4
FBXO28-204ENST00000519894 SAMD9LQ8IVG5 1584 aa23.79■■□□□ 1.4
FBXO28-204ENST00000519894 C9orf84Q5VXU9 1444 aa23.78■■□□□ 1.4
FBXO28-204ENST00000519894 CFDP1Q9UEE9 299 aaPredicted RBP23.78■■□□□ 1.4
FBXO28-204ENST00000519894 MYT1LQ9UL68 1186 aa23.78■■□□□ 1.4
FBXO28-204ENST00000519894 HECW2Q9P2P5 1572 aa23.78■■□□□ 1.4
FBXO28-204ENST00000519894 MLH3Q9UHC1 1453 aa23.77■■□□□ 1.4
FBXO28-204ENST00000519894 TIAM1Q13009 1591 aa23.74■■□□□ 1.39
FBXO28-204ENST00000519894 HNRNPMP52272 730 aaKnown RBP eCLIP23.74■■□□□ 1.39
FBXO28-204ENST00000519894 MLECQ14165 292 aa23.74■■□□□ 1.39
FBXO28-204ENST00000519894 DIP2CQ9Y2E4 1556 aa23.74■■□□□ 1.39
FBXO28-204ENST00000519894 SYCP2Q9BX26 1530 aa23.73■■□□□ 1.39
FBXO28-204ENST00000519894 KIAA1107Q9UPP5 1409 aa23.72■■□□□ 1.39
FBXO28-204ENST00000519894 RIMS1Q86UR5 1692 aaKnown RBP23.72■■□□□ 1.39
FBXO28-204ENST00000519894 ABCA6Q8N139 1617 aa23.7■■□□□ 1.39
FBXO28-204ENST00000519894 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
FBXO28-204ENST00000519894 PLEKHH2Q8IVE3 1493 aa23.69■■□□□ 1.38
FBXO28-204ENST00000519894 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
FBXO28-204ENST00000519894 ZNF644Q9H582 1327 aaPredicted RBP23.68■■□□□ 1.38
FBXO28-204ENST00000519894 REREQ9P2R6 1566 aa23.68■■□□□ 1.38
FBXO28-204ENST00000519894 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
FBXO28-204ENST00000519894 LRRC9Q6ZRR7 1453 aa23.66■■□□□ 1.38
FBXO28-204ENST00000519894 SPAG9O60271 1321 aaKnown RBP23.64■■□□□ 1.38
FBXO28-204ENST00000519894 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.37
FBXO28-204ENST00000519894 MAP3K1Q13233 1512 aa23.64■■□□□ 1.37
FBXO28-204ENST00000519894 FER1L4A9Z1Z3 1794 aa23.63■■□□□ 1.37
FBXO28-204ENST00000519894 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
FBXO28-204ENST00000519894 AGLP35573 1532 aa23.61■■□□□ 1.37
FBXO28-204ENST00000519894 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
FBXO28-204ENST00000519894 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
FBXO28-204ENST00000519894 INO80Q9ULG1 1556 aaPredicted RBP23.57■■□□□ 1.36
FBXO28-204ENST00000519894 CAMSAP2Q08AD1 1489 aa23.55■■□□□ 1.36
FBXO28-204ENST00000519894 CACNB1Q02641 598 aaPredicted RBP23.54■■□□□ 1.36
FBXO28-204ENST00000519894 CEBPAP49715 358 aaPredicted RBP23.53■■□□□ 1.36
FBXO28-204ENST00000519894 LMTK3Q96Q04 1460 aa23.52■■□□□ 1.36
FBXO28-204ENST00000519894 RTEL1-TNFRSF6BF6WH68 1400 aa23.5■■□□□ 1.35
FBXO28-204ENST00000519894 A2MP01023 1474 aa23.5■■□□□ 1.35
FBXO28-204ENST00000519894 APLP2Q06481 763 aa23.5■■□□□ 1.35
FBXO28-204ENST00000519894 RSPH4AQ5TD94 716 aa23.5■■□□□ 1.35
FBXO28-204ENST00000519894 CCDC141Q6ZP82 1450 aa23.49■■□□□ 1.35
FBXO28-204ENST00000519894 PLXNC1O60486 1568 aa23.48■■□□□ 1.35
FBXO28-204ENST00000519894 ADGBQ8N7X0 1667 aa23.45■■□□□ 1.34
FBXO28-204ENST00000519894 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.34
FBXO28-204ENST00000519894 MYOM3Q5VTT5 1437 aa23.45■■□□□ 1.34
FBXO28-204ENST00000519894 ESF1Q9H501 851 aaKnown RBP23.45■■□□□ 1.34
FBXO28-204ENST00000519894 MIA2Q96PC5 1412 aa23.44■■□□□ 1.34
FBXO28-204ENST00000519894 C3P01024 1663 aa23.42■■□□□ 1.34
FBXO28-204ENST00000519894 HSPA2P54652 639 aa23.42■■□□□ 1.34
FBXO28-204ENST00000519894 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
FBXO28-204ENST00000519894 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
FBXO28-204ENST00000519894 TSPY4P0CV99 314 aa23.4■■□□□ 1.34
FBXO28-204ENST00000519894 TSPY10P0CW01 314 aa23.4■■□□□ 1.34
FBXO28-204ENST00000519894 GGT6Q6P531 493 aa23.4■■□□□ 1.34
FBXO28-204ENST00000519894 SETD1BQ9UPS6 1966 aaKnown RBP23.37■■□□□ 1.33
FBXO28-204ENST00000519894 PREX1Q8TCU6 1659 aa23.37■■□□□ 1.33
FBXO28-204ENST00000519894 ZMYM3Q14202 1370 aa23.36■■□□□ 1.33
FBXO28-204ENST00000519894 MROH2AA6NES4 1674 aa23.35■■□□□ 1.33
FBXO28-204ENST00000519894 CLTCQ00610 1675 aaKnown RBP23.33■■□□□ 1.33
FBXO28-204ENST00000519894 MAST1Q9Y2H9 1570 aa23.33■■□□□ 1.33
FBXO28-204ENST00000519894 KIF3BO15066 747 aa23.32■■□□□ 1.32
FBXO28-204ENST00000519894 UHRF1BP1Q6BDS2 1440 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms