RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 GLI2P10070 1586 aa26.66■■□□□ 1.86
IGHV3-52-201ENST00000519770 PREX2Q70Z35 1606 aa26.65■■□□□ 1.86
IGHV3-52-201ENST00000519770 DIP2BQ9P265 1576 aa26.63■■□□□ 1.85
IGHV3-52-201ENST00000519770 PTPN23Q9H3S7 1636 aa26.62■■□□□ 1.85
IGHV3-52-201ENST00000519770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.61■■□□□ 1.85
IGHV3-52-201ENST00000519770 ARAP3Q8WWN8 1544 aa26.61■■□□□ 1.85
IGHV3-52-201ENST00000519770 CDC42BPBQ9Y5S2 1711 aa26.57■■□□□ 1.84
IGHV3-52-201ENST00000519770 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
IGHV3-52-201ENST00000519770 TCOF1Q13428 1488 aaKnown RBP26.56■■□□□ 1.84
IGHV3-52-201ENST00000519770 PCGF6Q9BYE7 350 aa26.56■■□□□ 1.84
IGHV3-52-201ENST00000519770 PLEKHH2Q8IVE3 1493 aa26.55■■□□□ 1.84
IGHV3-52-201ENST00000519770 FANCAO15360 1455 aa26.55■■□□□ 1.84
IGHV3-52-201ENST00000519770 CAMSAP2Q08AD1 1489 aa26.55■■□□□ 1.84
IGHV3-52-201ENST00000519770 MAP3K4Q9Y6R4 1608 aa26.54■■□□□ 1.84
IGHV3-52-201ENST00000519770 ITGAEP38570 1179 aa26.54■■□□□ 1.84
IGHV3-52-201ENST00000519770 CFAP74Q9C0B2 1584 aa26.53■■□□□ 1.84
IGHV3-52-201ENST00000519770 ZNF644Q9H582 1327 aaPredicted RBP26.52■■□□□ 1.84
IGHV3-52-201ENST00000519770 RSPH4AQ5TD94 716 aa26.51■■□□□ 1.83
IGHV3-52-201ENST00000519770 TEX14Q8IWB6 1497 aa26.49■■□□□ 1.83
IGHV3-52-201ENST00000519770 KIF13AQ9H1H9 1805 aa26.48■■□□□ 1.83
IGHV3-52-201ENST00000519770 KIAA1107Q9UPP5 1409 aa26.47■■□□□ 1.83
IGHV3-52-201ENST00000519770 SAMD9LQ8IVG5 1584 aa26.46■■□□□ 1.83
IGHV3-52-201ENST00000519770 NEO1Q92859 1461 aa26.46■■□□□ 1.83
IGHV3-52-201ENST00000519770 AKNAQ7Z591 1439 aa26.46■■□□□ 1.83
IGHV3-52-201ENST00000519770 HNRNPMP52272 730 aaKnown RBP eCLIP26.45■■□□□ 1.82
IGHV3-52-201ENST00000519770 TSPY4P0CV99 314 aa26.44■■□□□ 1.82
IGHV3-52-201ENST00000519770 TSPY10P0CW01 314 aa26.44■■□□□ 1.82
IGHV3-52-201ENST00000519770 ADGRL1O94910 1474 aa26.43■■□□□ 1.82
IGHV3-52-201ENST00000519770 TSPOAP1O95153 1857 aa26.43■■□□□ 1.82
IGHV3-52-201ENST00000519770 ABCC1P33527 1531 aa26.4■■□□□ 1.82
IGHV3-52-201ENST00000519770 SYCP2Q9BX26 1530 aa26.4■■□□□ 1.82
IGHV3-52-201ENST00000519770 DAPK1P53355 1430 aa26.39■■□□□ 1.82
IGHV3-52-201ENST00000519770 SCAPERQ9BY12 1400 aa26.39■■□□□ 1.82
IGHV3-52-201ENST00000519770 DNMT1P26358 1616 aaKnown RBP26.39■■□□□ 1.81
IGHV3-52-201ENST00000519770 ARHGEF5Q12774 1597 aa26.38■■□□□ 1.81
IGHV3-52-201ENST00000519770 CCDC141Q6ZP82 1450 aa26.38■■□□□ 1.81
IGHV3-52-201ENST00000519770 ABCC5O15440 1437 aa26.36■■□□□ 1.81
IGHV3-52-201ENST00000519770 MBD5Q9P267 1494 aa26.35■■□□□ 1.81
IGHV3-52-201ENST00000519770 CHIC2Q9UKJ5 165 aa26.34■■□□□ 1.81
IGHV3-52-201ENST00000519770 MYT1LQ9UL68 1186 aa26.33■■□□□ 1.81
IGHV3-52-201ENST00000519770 DENND4BO75064 1496 aaPredicted RBP26.31■■□□□ 1.8
IGHV3-52-201ENST00000519770 PPRC1Q5VV67 1664 aaKnown RBP26.31■■□□□ 1.8
IGHV3-52-201ENST00000519770 SHANK2Q9UPX8 1470 aa26.3■■□□□ 1.8
IGHV3-52-201ENST00000519770 ARHGEF12Q9NZN5 1544 aa26.3■■□□□ 1.8
IGHV3-52-201ENST00000519770 SPAG9O60271 1321 aaKnown RBP26.29■■□□□ 1.8
IGHV3-52-201ENST00000519770 C9orf84Q5VXU9 1444 aa26.29■■□□□ 1.8
IGHV3-52-201ENST00000519770 TRAPPC8Q9Y2L5 1435 aa26.29■■□□□ 1.8
IGHV3-52-201ENST00000519770 ZNF518AQ6AHZ1 1483 aa26.29■■□□□ 1.8
IGHV3-52-201ENST00000519770 AFAP1Q8N556 730 aa26.28■■□□□ 1.8
IGHV3-52-201ENST00000519770 ANKRD30AQ9BXX3 1397 aa26.28■■□□□ 1.8
IGHV3-52-201ENST00000519770 CROCC2H7BZ55 1655 aa26.27■■□□□ 1.8
IGHV3-52-201ENST00000519770 PTPRKQ15262 1439 aa26.26■■□□□ 1.79
IGHV3-52-201ENST00000519770 ROCK1Q13464 1354 aa26.26■■□□□ 1.79
IGHV3-52-201ENST00000519770 POGZQ7Z3K3 1410 aa26.25■■□□□ 1.79
IGHV3-52-201ENST00000519770 RRP7BPQ9NSQ0 103 aa26.23■■□□□ 1.79
IGHV3-52-201ENST00000519770 ADGBQ8N7X0 1667 aa26.22■■□□□ 1.79
IGHV3-52-201ENST00000519770 MAST1Q9Y2H9 1570 aa26.21■■□□□ 1.79
IGHV3-52-201ENST00000519770 RAPGEF3O95398 923 aa26.21■■□□□ 1.79
IGHV3-52-201ENST00000519770 RTEL1-TNFRSF6BF6WH68 1400 aa26.21■■□□□ 1.79
IGHV3-52-201ENST00000519770 ADGRL2O95490 1459 aa26.19■■□□□ 1.78
IGHV3-52-201ENST00000519770 HFM1A2PYH4 1435 aa26.17■■□□□ 1.78
IGHV3-52-201ENST00000519770 NCOA1Q15788 1441 aa26.17■■□□□ 1.78
IGHV3-52-201ENST00000519770 SETD5Q9C0A6 1442 aa26.17■■□□□ 1.78
IGHV3-52-201ENST00000519770 KIF15Q9NS87 1388 aa26.14■■□□□ 1.78
IGHV3-52-201ENST00000519770 KDM5CP41229 1560 aa26.14■■□□□ 1.78
IGHV3-52-201ENST00000519770 ATP7AQ04656 1500 aa26.14■■□□□ 1.77
IGHV3-52-201ENST00000519770 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.77
IGHV3-52-201ENST00000519770 RICTORQ6R327 1708 aa26.13■■□□□ 1.77
IGHV3-52-201ENST00000519770 MLH3Q9UHC1 1453 aa26.12■■□□□ 1.77
IGHV3-52-201ENST00000519770 NAIPQ13075 1403 aa26.12■■□□□ 1.77
IGHV3-52-201ENST00000519770 HECW2Q9P2P5 1572 aa26.12■■□□□ 1.77
IGHV3-52-201ENST00000519770 ZFYVE16Q7Z3T8 1539 aa26.11■■□□□ 1.77
IGHV3-52-201ENST00000519770 PLXNC1O60486 1568 aa26.11■■□□□ 1.77
IGHV3-52-201ENST00000519770 INO80Q9ULG1 1556 aaPredicted RBP26.1■■□□□ 1.77
IGHV3-52-201ENST00000519770 MAGI2Q86UL8 1455 aa26.09■■□□□ 1.77
IGHV3-52-201ENST00000519770 GCC2Q8IWJ2 1684 aa26.08■■□□□ 1.77
IGHV3-52-201ENST00000519770 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
IGHV3-52-201ENST00000519770 KDM6BO15054 1643 aa26.07■■□□□ 1.76
IGHV3-52-201ENST00000519770 HRCP23327 699 aa26.07■■□□□ 1.76
IGHV3-52-201ENST00000519770 ZMYM4Q5VZL5 1548 aa26.07■■□□□ 1.76
IGHV3-52-201ENST00000519770 ANKRD50Q9ULJ7 1429 aa26.06■■□□□ 1.76
IGHV3-52-201ENST00000519770 DUOX2Q9NRD8 1548 aa26.06■■□□□ 1.76
IGHV3-52-201ENST00000519770 FRMPD1Q5SYB0 1578 aa26.04■■□□□ 1.76
IGHV3-52-201ENST00000519770 KIDINS220Q9ULH0 1771 aa26.04■■□□□ 1.76
IGHV3-52-201ENST00000519770 COL17A1Q9UMD9 1497 aaPredicted RBP26.04■■□□□ 1.76
IGHV3-52-201ENST00000519770 ERBINQ96RT1 1412 aa26■■□□□ 1.75
IGHV3-52-201ENST00000519770 TRIM52Q96A61 297 aa26■■□□□ 1.75
IGHV3-52-201ENST00000519770 DHX29Q7Z478 1369 aaKnown RBP25.99■■□□□ 1.75
IGHV3-52-201ENST00000519770 A2MP01023 1474 aa25.98■■□□□ 1.75
IGHV3-52-201ENST00000519770 ATP10AO60312 1499 aa25.95■■□□□ 1.74
IGHV3-52-201ENST00000519770 YEATS2Q9ULM3 1422 aa25.95■■□□□ 1.74
IGHV3-52-201ENST00000519770 ABCA6Q8N139 1617 aa25.94■■□□□ 1.74
IGHV3-52-201ENST00000519770 DIP2CQ9Y2E4 1556 aa25.93■■□□□ 1.74
IGHV3-52-201ENST00000519770 KIF3BO15066 747 aa25.91■■□□□ 1.74
IGHV3-52-201ENST00000519770 ARHGEF40Q8TER5 1519 aa25.89■■□□□ 1.74
IGHV3-52-201ENST00000519770 EIF2AK4Q9P2K8 1649 aaKnown RBP25.88■■□□□ 1.73
IGHV3-52-201ENST00000519770 CCER1Q8TC90 406 aaPredicted RBP25.87■■□□□ 1.73
IGHV3-52-201ENST00000519770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.87■■□□□ 1.73
IGHV3-52-201ENST00000519770 KANK1Q14678 1352 aa25.86■■□□□ 1.73
IGHV3-52-201ENST00000519770 NUP155O75694 1391 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms