RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 KIAA0556O60303 1618 aa11.67□□□□□ -0.54
TRPS1-209ENST00000519674 HFM1A2PYH4 1435 aa11.67□□□□□ -0.54
TRPS1-209ENST00000519674 DISP1Q96F81 1524 aa11.67□□□□□ -0.54
TRPS1-209ENST00000519674 PAK3O75914 559 aaPredicted RBP11.66□□□□□ -0.54
TRPS1-209ENST00000519674 FBLN2P98095 1184 aa11.66□□□□□ -0.54
TRPS1-209ENST00000519674 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
TRPS1-209ENST00000519674 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
TRPS1-209ENST00000519674 MAGI1Q96QZ7 1491 aaPredicted RBP11.65□□□□□ -0.55
TRPS1-209ENST00000519674 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
TRPS1-209ENST00000519674 NAIPQ13075 1403 aa11.64□□□□□ -0.55
TRPS1-209ENST00000519674 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
TRPS1-209ENST00000519674 SYNJ2O15056 1496 aa11.62□□□□□ -0.55
TRPS1-209ENST00000519674 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
TRPS1-209ENST00000519674 WASHC2CQ9Y4E1 1318 aa11.62□□□□□ -0.55
TRPS1-209ENST00000519674 UACAQ9BZF9 1416 aa11.62□□□□□ -0.55
TRPS1-209ENST00000519674 RRP7BPQ9NSQ0 103 aa11.62□□□□□ -0.55
TRPS1-209ENST00000519674 NUP153P49790 1475 aaKnown RBP11.61□□□□□ -0.55
TRPS1-209ENST00000519674 TCOF1Q13428 1488 aaKnown RBP11.61□□□□□ -0.55
TRPS1-209ENST00000519674 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
TRPS1-209ENST00000519674 MIA2Q96PC5 1412 aa11.58□□□□□ -0.56
TRPS1-209ENST00000519674 ZMYND15Q9H091 742 aa11.58□□□□□ -0.56
TRPS1-209ENST00000519674 RSPH6AQ9H0K4 717 aa11.58□□□□□ -0.56
TRPS1-209ENST00000519674 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
TRPS1-209ENST00000519674 GLIPR1L2Q4G1C9 344 aa11.57□□□□□ -0.56
TRPS1-209ENST00000519674 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
TRPS1-209ENST00000519674 GCC2Q8IWJ2 1684 aa11.57□□□□□ -0.56
TRPS1-209ENST00000519674 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
TRPS1-209ENST00000519674 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
TRPS1-209ENST00000519674 NUP160Q12769 1436 aa11.55□□□□□ -0.56
TRPS1-209ENST00000519674 JPH4Q96JJ6 628 aa11.55□□□□□ -0.56
TRPS1-209ENST00000519674 KDM6BO15054 1643 aa11.55□□□□□ -0.56
TRPS1-209ENST00000519674 PRG4Q92954 1404 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-209ENST00000519674 ZNF644Q9H582 1327 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-209ENST00000519674 TRIM52Q96A61 297 aa11.54□□□□□ -0.56
TRPS1-209ENST00000519674 HIRIP3Q9BW71 556 aaPredicted RBP11.54□□□□□ -0.56
TRPS1-209ENST00000519674 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
TRPS1-209ENST00000519674 IPO9Q96P70 1041 aaKnown RBP11.53□□□□□ -0.56
TRPS1-209ENST00000519674 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
TRPS1-209ENST00000519674 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
TRPS1-209ENST00000519674 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
TRPS1-209ENST00000519674 DAPK1P53355 1430 aa11.52□□□□□ -0.57
TRPS1-209ENST00000519674 TROQ12816 1431 aaPredicted RBP11.51□□□□□ -0.57
TRPS1-209ENST00000519674 PPP4R2Q9NY27 417 aa11.51□□□□□ -0.57
TRPS1-209ENST00000519674 DNMT1P26358 1616 aaKnown RBP11.5□□□□□ -0.57
TRPS1-209ENST00000519674 DENND4BO75064 1496 aaPredicted RBP11.5□□□□□ -0.57
TRPS1-209ENST00000519674 KIF14Q15058 1648 aa11.5□□□□□ -0.57
TRPS1-209ENST00000519674 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
TRPS1-209ENST00000519674 ABCC5O15440 1437 aa11.5□□□□□ -0.57
TRPS1-209ENST00000519674 BRPF3Q9ULD4 1205 aa11.49□□□□□ -0.57
TRPS1-209ENST00000519674 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
TRPS1-209ENST00000519674 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
TRPS1-209ENST00000519674 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
TRPS1-209ENST00000519674 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-209ENST00000519674 ITSN2Q9NZM3 1697 aa11.47□□□□□ -0.57
TRPS1-209ENST00000519674 CAMSAP2Q08AD1 1489 aa11.47□□□□□ -0.57
TRPS1-209ENST00000519674 FOXD1Q16676 465 aa11.47□□□□□ -0.57
TRPS1-209ENST00000519674 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-209ENST00000519674 ROCK1Q13464 1354 aa11.47□□□□□ -0.57
TRPS1-209ENST00000519674 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.57
TRPS1-209ENST00000519674 GPATCH8Q9UKJ3 1502 aaKnown RBP11.46□□□□□ -0.57
TRPS1-209ENST00000519674 ANP32AP39687 249 aaKnown RBP11.46□□□□□ -0.58
TRPS1-209ENST00000519674 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
TRPS1-209ENST00000519674 ADCY10Q96PN6 1610 aa11.45□□□□□ -0.58
TRPS1-209ENST00000519674 ABCA8O94911 1581 aa11.45□□□□□ -0.58
TRPS1-209ENST00000519674 PLEKHD1A6NEE1 506 aa11.44□□□□□ -0.58
TRPS1-209ENST00000519674 ATP10BO94823 1461 aa11.43□□□□□ -0.58
TRPS1-209ENST00000519674 CHD1O14646 1710 aa11.43□□□□□ -0.58
TRPS1-209ENST00000519674 FAM43AQ8N2R8 423 aa11.42□□□□□ -0.58
TRPS1-209ENST00000519674 CDC42BPAQ5VT25 1732 aa11.41□□□□□ -0.58
TRPS1-209ENST00000519674 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
TRPS1-209ENST00000519674 PTPRGP23470 1445 aa11.4□□□□□ -0.58
TRPS1-209ENST00000519674 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.58
TRPS1-209ENST00000519674 NEFMP07197 916 aa11.4□□□□□ -0.58
TRPS1-209ENST00000519674 NCOA1Q15788 1441 aa11.4□□□□□ -0.58
TRPS1-209ENST00000519674 CROCC2H7BZ55 1655 aa11.39□□□□□ -0.59
TRPS1-209ENST00000519674 L3MBTL2Q969R5 705 aa11.39□□□□□ -0.59
TRPS1-209ENST00000519674 ABCC10Q5T3U5 1492 aa11.38□□□□□ -0.59
TRPS1-209ENST00000519674 ANKRD30BQ9BXX2 1392 aa11.38□□□□□ -0.59
TRPS1-209ENST00000519674 GSE1Q14687 1217 aa11.38□□□□□ -0.59
TRPS1-209ENST00000519674 B4GALNT3Q6L9W6 998 aa11.37□□□□□ -0.59
TRPS1-209ENST00000519674 ADGRL2O95490 1459 aa11.36□□□□□ -0.59
TRPS1-209ENST00000519674 RPRD2Q5VT52 1461 aaKnown RBP11.36□□□□□ -0.59
TRPS1-209ENST00000519674 ANKRD30AQ9BXX3 1397 aa11.36□□□□□ -0.59
TRPS1-209ENST00000519674 PZPP20742 1482 aa11.36□□□□□ -0.59
TRPS1-209ENST00000519674 ANP32CO43423 234 aa11.35□□□□□ -0.59
TRPS1-209ENST00000519674 FGD1P98174 961 aa11.35□□□□□ -0.59
TRPS1-209ENST00000519674 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
TRPS1-209ENST00000519674 AAMPQ13685 434 aa11.35□□□□□ -0.59
TRPS1-209ENST00000519674 TEX14Q8IWB6 1497 aa11.34□□□□□ -0.59
TRPS1-209ENST00000519674 C9orf84Q5VXU9 1444 aa11.34□□□□□ -0.59
TRPS1-209ENST00000519674 ANKRD50Q9ULJ7 1429 aa11.34□□□□□ -0.59
TRPS1-209ENST00000519674 PPM1GO15355 546 aaPredicted RBP11.34□□□□□ -0.59
TRPS1-209ENST00000519674 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
TRPS1-209ENST00000519674 SHROOM2Q13796 1616 aa11.33□□□□□ -0.6
TRPS1-209ENST00000519674 ERCC6L2Q5T890 1561 aa11.33□□□□□ -0.6
TRPS1-209ENST00000519674 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRPS1-209ENST00000519674 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■■■■■ 26.9
TRPS1-209ENST00000519674 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
TRPS1-209ENST00000519674 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
TRPS1-209ENST00000519674 RBM10P98175 930 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms