RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 CHGAP10645 457 aaKnown RBP4.35□□□□□ -1.71
EFR3A-202ENST00000519656 PTPRKQ15262 1439 aa4.35□□□□□ -1.71
EFR3A-202ENST00000519656 SENP3-EIF4A1A0A087X0R7 540 aa4.35□□□□□ -1.71
EFR3A-202ENST00000519656 CFDP1Q9UEE9 299 aaPredicted RBP4.35□□□□□ -1.71
EFR3A-202ENST00000519656 CCDC9Q9Y3X0 531 aaKnown RBP4.35□□□□□ -1.71
EFR3A-202ENST00000519656 WASHC2CQ9Y4E1 1318 aa4.34□□□□□ -1.71
EFR3A-202ENST00000519656 CEP170Q5SW79 1584 aa4.34□□□□□ -1.71
EFR3A-202ENST00000519656 ERICH3Q5RHP9 1530 aa4.34□□□□□ -1.71
EFR3A-202ENST00000519656 MAPKBP1O60336 1514 aa4.34□□□□□ -1.72
EFR3A-202ENST00000519656 KANK1Q14678 1352 aa4.33□□□□□ -1.72
EFR3A-202ENST00000519656 HECW2Q9P2P5 1572 aa4.33□□□□□ -1.72
EFR3A-202ENST00000519656 RXRBP28702 533 aa4.33□□□□□ -1.72
EFR3A-202ENST00000519656 CACNB1Q02641 598 aaPredicted RBP4.33□□□□□ -1.72
EFR3A-202ENST00000519656 RNF39Q9H2S5 420 aa4.33□□□□□ -1.72
EFR3A-202ENST00000519656 PCDH10Q9P2E7 1040 aa4.33□□□□□ -1.72
EFR3A-202ENST00000519656 WDR7Q9Y4E6 1490 aa4.33□□□□□ -1.72
EFR3A-202ENST00000519656 IQSEC2Q5JU85 1478 aa4.32□□□□□ -1.72
EFR3A-202ENST00000519656 CCDC125Q86Z20 511 aa4.32□□□□□ -1.72
EFR3A-202ENST00000519656 NEO1Q92859 1461 aa4.32□□□□□ -1.72
EFR3A-202ENST00000519656 CEBPAP49715 358 aaPredicted RBP4.32□□□□□ -1.72
EFR3A-202ENST00000519656 CLASP1Q7Z460 1538 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 CHD1O14646 1710 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 NBPF8Q3BBV2 869 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 NBPF14Q5TI25 921 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 CADPS2Q86UW7 1296 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 TRIM52Q96A61 297 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 PTPRMP28827 1452 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 RAPGEF2Q9Y4G8 1499 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 PTPRTO14522 1441 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 SCAPERQ9BY12 1400 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.31□□□□□ -1.72
EFR3A-202ENST00000519656 KIF3BO15066 747 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 TXNDC2Q86VQ3 553 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 IGF1RP08069 1367 aa4.31□□□□□ -1.72
EFR3A-202ENST00000519656 YY1P25490 414 aa4.3□□□□□ -1.72
EFR3A-202ENST00000519656 BAG6P46379 1132 aa4.3□□□□□ -1.72
EFR3A-202ENST00000519656 CFAP43Q8NDM7 1665 aa4.3□□□□□ -1.72
EFR3A-202ENST00000519656 MAGI2Q86UL8 1455 aa4.3□□□□□ -1.72
EFR3A-202ENST00000519656 HSPA1LP34931 641 aa4.29□□□□□ -1.72
EFR3A-202ENST00000519656 MSH6P52701 1360 aa4.29□□□□□ -1.72
EFR3A-202ENST00000519656 UHRF1BP1LA0JNW5 1464 aa4.29□□□□□ -1.72
EFR3A-202ENST00000519656 TRAPPC8Q9Y2L5 1435 aa4.29□□□□□ -1.72
EFR3A-202ENST00000519656 IFFO2Q5TF58 517 aa4.29□□□□□ -1.72
EFR3A-202ENST00000519656 MAGI3Q5TCQ9 1506 aa4.29□□□□□ -1.72
EFR3A-202ENST00000519656 MTUS2Q5JR59 1369 aa4.29□□□□□ -1.72
EFR3A-202ENST00000519656 HNRNPMP52272 730 aaKnown RBP eCLIP4.28□□□□□ -1.72
EFR3A-202ENST00000519656 EPRSP07814 1512 aaKnown RBP4.28□□□□□ -1.72
EFR3A-202ENST00000519656 ILDR2Q71H61 639 aa4.28□□□□□ -1.72
EFR3A-202ENST00000519656 SLC24A1O60721 1099 aa4.28□□□□□ -1.73
EFR3A-202ENST00000519656 C16orf71Q8IYS4 520 aaPredicted RBP4.28□□□□□ -1.73
EFR3A-202ENST00000519656 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
EFR3A-202ENST00000519656 CCNB3Q8WWL7 1395 aa4.27□□□□□ -1.73
EFR3A-202ENST00000519656 NCKAP5LQ9HCH0 1330 aa4.27□□□□□ -1.73
EFR3A-202ENST00000519656 EEA1Q15075 1411 aa4.27□□□□□ -1.73
EFR3A-202ENST00000519656 LMOD2Q6P5Q4 547 aa4.27□□□□□ -1.73
EFR3A-202ENST00000519656 LRRC59Q96AG4 307 aaKnown RBP4.27□□□□□ -1.73
EFR3A-202ENST00000519656 ATP10AO60312 1499 aa4.27□□□□□ -1.73
EFR3A-202ENST00000519656 ATAD2Q6PL18 1390 aa4.27□□□□□ -1.73
EFR3A-202ENST00000519656 FMN1Q68DA7 1419 aa4.26□□□□□ -1.73
EFR3A-202ENST00000519656 RBM6P78332 1123 aaKnown RBP4.26□□□□□ -1.73
EFR3A-202ENST00000519656 FAM135AQ9P2D6 1515 aa4.26□□□□□ -1.73
EFR3A-202ENST00000519656 C11orf95C9JLR9 678 aaPredicted RBP4.26□□□□□ -1.73
EFR3A-202ENST00000519656 EFCAB5A4FU69 1503 aa4.26□□□□□ -1.73
EFR3A-202ENST00000519656 C9orf84Q5VXU9 1444 aa4.26□□□□□ -1.73
EFR3A-202ENST00000519656 CUX1P39880 1505 aa4.26□□□□□ -1.73
EFR3A-202ENST00000519656 AFAP1Q8N556 730 aa4.26□□□□□ -1.73
EFR3A-202ENST00000519656 SETD1BQ9UPS6 1966 aaKnown RBP4.25□□□□□ -1.73
EFR3A-202ENST00000519656 TARBP1Q13395 1621 aaKnown RBP4.25□□□□□ -1.73
EFR3A-202ENST00000519656 PCF11O94913 1555 aaKnown RBP4.25□□□□□ -1.73
EFR3A-202ENST00000519656 ZNF326Q5BKZ1 582 aaKnown RBP4.25□□□□□ -1.73
EFR3A-202ENST00000519656 TRPC5Q9UL62 973 aaPredicted RBP4.25□□□□□ -1.73
EFR3A-202ENST00000519656 PLEKHH2Q8IVE3 1493 aa4.25□□□□□ -1.73
EFR3A-202ENST00000519656 TSPOAP1O95153 1857 aa4.25□□□□□ -1.73
EFR3A-202ENST00000519656 SPATA31A6Q5VVP1 1343 aa4.25□□□□□ -1.73
EFR3A-202ENST00000519656 TNRQ92752 1358 aa4.24□□□□□ -1.73
EFR3A-202ENST00000519656 GLI2P10070 1586 aa4.24□□□□□ -1.73
EFR3A-202ENST00000519656 ADAMTS12P58397 1594 aa4.24□□□□□ -1.73
EFR3A-202ENST00000519656 ZNF335Q9H4Z2 1342 aaPredicted RBP4.24□□□□□ -1.73
EFR3A-202ENST00000519656 JCADQ9P266 1359 aa4.24□□□□□ -1.73
EFR3A-202ENST00000519656 IQGAP2Q13576 1575 aa4.24□□□□□ -1.73
EFR3A-202ENST00000519656 DIP2BQ9P265 1576 aa4.24□□□□□ -1.73
EFR3A-202ENST00000519656 KDM5BQ9UGL1 1544 aa4.23□□□□□ -1.73
EFR3A-202ENST00000519656 AIDAQ96BJ3 306 aa4.23□□□□□ -1.73
EFR3A-202ENST00000519656 PSME1Q06323 249 aa4.23□□□□□ -1.73
EFR3A-202ENST00000519656 ARAP3Q8WWN8 1544 aa4.23□□□□□ -1.73
EFR3A-202ENST00000519656 GIGYF1O75420 1035 aaPredicted RBP4.23□□□□□ -1.73
EFR3A-202ENST00000519656 QTRT2Q9H974 415 aaKnown RBP4.23□□□□□ -1.73
EFR3A-202ENST00000519656 SLC52A1Q9NWF4 448 aa4.23□□□□□ -1.73
EFR3A-202ENST00000519656 FHOD3Q2V2M9 1422 aa4.22□□□□□ -1.73
EFR3A-202ENST00000519656 ZMYM3Q14202 1370 aa4.22□□□□□ -1.73
EFR3A-202ENST00000519656 C8orf37Q96NL8 207 aa4.22□□□□□ -1.73
EFR3A-202ENST00000519656 ACIN1Q9UKV3 1341 aaKnown RBP4.21□□□□□ -1.73
EFR3A-202ENST00000519656 KCNA6P17658 529 aa4.21□□□□□ -1.73
EFR3A-202ENST00000519656 C19orf44Q9H6X5 657 aa4.21□□□□□ -1.74
EFR3A-202ENST00000519656 ZNF518AQ6AHZ1 1483 aa4.21□□□□□ -1.74
EFR3A-202ENST00000519656 PDE3BQ13370 1112 aa4.21□□□□□ -1.74
EFR3A-202ENST00000519656 ZFYVE16Q7Z3T8 1539 aa4.21□□□□□ -1.74
EFR3A-202ENST00000519656 SLAIN2Q9P270 581 aa4.21□□□□□ -1.74
EFR3A-202ENST00000519656 CCDC18Q5T9S5 1454 aa4.21□□□□□ -1.74
EFR3A-202ENST00000519656 ADAMTS2O95450 1211 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms