RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 NAIPQ13075 1403 aa14.83□□□□□ -0.03
PDGFRB-205ENST00000519575 ARID3CA6NKF2 412 aa14.83□□□□□ -0.04
PDGFRB-205ENST00000519575 ZCCHC11Q5TAX3 1644 aaKnown RBP14.83□□□□□ -0.04
PDGFRB-205ENST00000519575 MYO5CQ9NQX4 1742 aa14.83□□□□□ -0.04
PDGFRB-205ENST00000519575 ERCC6L2Q5T890 1561 aa14.82□□□□□ -0.04
PDGFRB-205ENST00000519575 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
PDGFRB-205ENST00000519575 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
PDGFRB-205ENST00000519575 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
PDGFRB-205ENST00000519575 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
PDGFRB-205ENST00000519575 ADGRL2O95490 1459 aa14.79□□□□□ -0.04
PDGFRB-205ENST00000519575 RSPH4AQ5TD94 716 aa14.79□□□□□ -0.04
PDGFRB-205ENST00000519575 ARAP3Q8WWN8 1544 aa14.78□□□□□ -0.04
PDGFRB-205ENST00000519575 PTPRKQ15262 1439 aa14.78□□□□□ -0.04
PDGFRB-205ENST00000519575 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
PDGFRB-205ENST00000519575 ABCC5O15440 1437 aa14.76□□□□□ -0.05
PDGFRB-205ENST00000519575 CDC42BPBQ9Y5S2 1711 aa14.75□□□□□ -0.05
PDGFRB-205ENST00000519575 ANKRD30AQ9BXX3 1397 aa14.74□□□□□ -0.05
PDGFRB-205ENST00000519575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.74□□□□□ -0.05
PDGFRB-205ENST00000519575 TTC37Q6PGP7 1564 aa14.73□□□□□ -0.05
PDGFRB-205ENST00000519575 ARHGAP5Q13017 1502 aa14.72□□□□□ -0.05
PDGFRB-205ENST00000519575 CCDC141Q6ZP82 1450 aa14.72□□□□□ -0.05
PDGFRB-205ENST00000519575 WDR7Q9Y4E6 1490 aa14.71□□□□□ -0.05
PDGFRB-205ENST00000519575 KIAA1107Q9UPP5 1409 aa14.71□□□□□ -0.05
PDGFRB-205ENST00000519575 MAST1Q9Y2H9 1570 aa14.71□□□□□ -0.05
PDGFRB-205ENST00000519575 SAMD9LQ8IVG5 1584 aa14.7□□□□□ -0.06
PDGFRB-205ENST00000519575 C9orf84Q5VXU9 1444 aa14.69□□□□□ -0.06
PDGFRB-205ENST00000519575 NCOA1Q15788 1441 aa14.68□□□□□ -0.06
PDGFRB-205ENST00000519575 TSPY4P0CV99 314 aa14.68□□□□□ -0.06
PDGFRB-205ENST00000519575 TSPY10P0CW01 314 aa14.68□□□□□ -0.06
PDGFRB-205ENST00000519575 PLCH2O75038 1416 aa14.67□□□□□ -0.06
PDGFRB-205ENST00000519575 ABCA9Q8IUA7 1624 aa14.67□□□□□ -0.06
PDGFRB-205ENST00000519575 ZNF777Q9ULD5 760 aaPredicted RBP14.67□□□□□ -0.06
PDGFRB-205ENST00000519575 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
PDGFRB-205ENST00000519575 CFAP74Q9C0B2 1584 aa14.65□□□□□ -0.06
PDGFRB-205ENST00000519575 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDGFRB-205ENST00000519575 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
PDGFRB-205ENST00000519575 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
PDGFRB-205ENST00000519575 ZNF644Q9H582 1327 aaPredicted RBP14.65□□□□□ -0.06
PDGFRB-205ENST00000519575 MBD5Q9P267 1494 aa14.64□□□□□ -0.07
PDGFRB-205ENST00000519575 SYCP2Q9BX26 1530 aa14.63□□□□□ -0.07
PDGFRB-205ENST00000519575 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
PDGFRB-205ENST00000519575 EFCAB2Q5VUJ9 269 aa14.63□□□□□ -0.07
PDGFRB-205ENST00000519575 ABCC1P33527 1531 aa14.62□□□□□ -0.07
PDGFRB-205ENST00000519575 ANKRD50Q9ULJ7 1429 aa14.62□□□□□ -0.07
PDGFRB-205ENST00000519575 KDM5DQ9BY66 1539 aa14.61□□□□□ -0.07
PDGFRB-205ENST00000519575 TONSLQ96HA7 1378 aa14.6□□□□□ -0.07
PDGFRB-205ENST00000519575 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
PDGFRB-205ENST00000519575 KDM6BO15054 1643 aa14.59□□□□□ -0.07
PDGFRB-205ENST00000519575 ASXL2Q76L83 1435 aa14.59□□□□□ -0.07
PDGFRB-205ENST00000519575 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
PDGFRB-205ENST00000519575 RTEL1-TNFRSF6BF6WH68 1400 aa14.57□□□□□ -0.08
PDGFRB-205ENST00000519575 DUOX2Q9NRD8 1548 aa14.56□□□□□ -0.08
PDGFRB-205ENST00000519575 KCNH8Q96L42 1107 aa14.56□□□□□ -0.08
PDGFRB-205ENST00000519575 ERBINQ96RT1 1412 aa14.56□□□□□ -0.08
PDGFRB-205ENST00000519575 MPHOSPH9Q99550 1183 aa14.55□□□□□ -0.08
PDGFRB-205ENST00000519575 UNC13BO14795 1591 aa14.55□□□□□ -0.08
PDGFRB-205ENST00000519575 FANCAO15360 1455 aa14.54□□□□□ -0.08
PDGFRB-205ENST00000519575 PZPP20742 1482 aa14.52□□□□□ -0.08
PDGFRB-205ENST00000519575 HNRNPMP52272 730 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDGFRB-205ENST00000519575 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
PDGFRB-205ENST00000519575 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
PDGFRB-205ENST00000519575 DIEXFQ68CQ4 756 aaKnown RBP14.5□□□□□ -0.09
PDGFRB-205ENST00000519575 ADGRL1O94910 1474 aa14.5□□□□□ -0.09
PDGFRB-205ENST00000519575 RPRD2Q5VT52 1461 aaKnown RBP14.5□□□□□ -0.09
PDGFRB-205ENST00000519575 INO80Q9ULG1 1556 aaPredicted RBP14.49□□□□□ -0.09
PDGFRB-205ENST00000519575 ZFYVE16Q7Z3T8 1539 aa14.49□□□□□ -0.09
PDGFRB-205ENST00000519575 DENND4BO75064 1496 aaPredicted RBP14.49□□□□□ -0.09
PDGFRB-205ENST00000519575 IQGAP3Q86VI3 1631 aa14.48□□□□□ -0.09
PDGFRB-205ENST00000519575 ANKRD30BQ9BXX2 1392 aa14.48□□□□□ -0.09
PDGFRB-205ENST00000519575 EIF2AK4Q9P2K8 1649 aaKnown RBP14.48□□□□□ -0.09
PDGFRB-205ENST00000519575 MAGI2Q86UL8 1455 aa14.48□□□□□ -0.09
PDGFRB-205ENST00000519575 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
PDGFRB-205ENST00000519575 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
PDGFRB-205ENST00000519575 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
PDGFRB-205ENST00000519575 ATP7AQ04656 1500 aa14.47□□□□□ -0.09
PDGFRB-205ENST00000519575 ZNF518AQ6AHZ1 1483 aa14.47□□□□□ -0.09
PDGFRB-205ENST00000519575 NEO1Q92859 1461 aa14.47□□□□□ -0.09
PDGFRB-205ENST00000519575 PPP1R15AO75807 674 aaPredicted RBP14.47□□□□□ -0.09
PDGFRB-205ENST00000519575 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
PDGFRB-205ENST00000519575 NUP155O75694 1391 aa14.47□□□□□ -0.09
PDGFRB-205ENST00000519575 ARHGEF12Q9NZN5 1544 aa14.46□□□□□ -0.09
PDGFRB-205ENST00000519575 GLI2P10070 1586 aa14.46□□□□□ -0.09
PDGFRB-205ENST00000519575 FAM135AQ9P2D6 1515 aa14.46□□□□□ -0.1
PDGFRB-205ENST00000519575 SPAG9O60271 1321 aaKnown RBP14.45□□□□□ -0.1
PDGFRB-205ENST00000519575 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
PDGFRB-205ENST00000519575 TRAPPC8Q9Y2L5 1435 aa14.42□□□□□ -0.1
PDGFRB-205ENST00000519575 DEPDC5O75140 1603 aa14.42□□□□□ -0.1
PDGFRB-205ENST00000519575 KDM5CP41229 1560 aa14.42□□□□□ -0.1
PDGFRB-205ENST00000519575 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
PDGFRB-205ENST00000519575 MAP3K4Q9Y6R4 1608 aa14.41□□□□□ -0.1
PDGFRB-205ENST00000519575 TEX14Q8IWB6 1497 aa14.4□□□□□ -0.1
PDGFRB-205ENST00000519575 HECW2Q9P2P5 1572 aa14.39□□□□□ -0.11
PDGFRB-205ENST00000519575 KANK1Q14678 1352 aa14.39□□□□□ -0.11
PDGFRB-205ENST00000519575 PKD2Q13563 968 aa14.39□□□□□ -0.11
PDGFRB-205ENST00000519575 POGZQ7Z3K3 1410 aa14.39□□□□□ -0.11
PDGFRB-205ENST00000519575 ATP10AO60312 1499 aa14.38□□□□□ -0.11
PDGFRB-205ENST00000519575 MLH3Q9UHC1 1453 aa14.38□□□□□ -0.11
PDGFRB-205ENST00000519575 BCORL1Q5H9F3 1711 aa14.37□□□□□ -0.11
PDGFRB-205ENST00000519575 TET3O43151 1660 aa14.36□□□□□ -0.11
PDGFRB-205ENST00000519575 PRDM15P57071 1507 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms