RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
PVT1-208ENST00000519481 ZFYVE16Q7Z3T8 1539 aa17.7■□□□□ 0.42
PVT1-208ENST00000519481 KIF14Q15058 1648 aa17.69■□□□□ 0.42
PVT1-208ENST00000519481 MYO5CQ9NQX4 1742 aa17.68■□□□□ 0.42
PVT1-208ENST00000519481 YEATS2Q9ULM3 1422 aa17.66■□□□□ 0.42
PVT1-208ENST00000519481 MADDQ8WXG6 1647 aa17.66■□□□□ 0.42
PVT1-208ENST00000519481 CASKIN1Q8WXD9 1431 aa17.65■□□□□ 0.42
PVT1-208ENST00000519481 CCDC18Q5T9S5 1454 aa17.65■□□□□ 0.42
PVT1-208ENST00000519481 ILDR1Q86SU0 546 aaPredicted RBP17.65■□□□□ 0.42
PVT1-208ENST00000519481 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
PVT1-208ENST00000519481 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.41
PVT1-208ENST00000519481 MLECQ14165 292 aa17.63■□□□□ 0.41
PVT1-208ENST00000519481 ZNF518AQ6AHZ1 1483 aa17.62■□□□□ 0.41
PVT1-208ENST00000519481 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
PVT1-208ENST00000519481 ATP10AO60312 1499 aa17.61■□□□□ 0.41
PVT1-208ENST00000519481 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
PVT1-208ENST00000519481 PCF11O94913 1555 aaKnown RBP17.6■□□□□ 0.41
PVT1-208ENST00000519481 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
PVT1-208ENST00000519481 LRRIQ1Q96JM4 1722 aa17.58■□□□□ 0.41
PVT1-208ENST00000519481 FYCO1Q9BQS8 1478 aa17.58■□□□□ 0.41
PVT1-208ENST00000519481 AFAP1Q8N556 730 aa17.58■□□□□ 0.4
PVT1-208ENST00000519481 LMTK3Q96Q04 1460 aa17.53■□□□□ 0.4
PVT1-208ENST00000519481 KDM5CP41229 1560 aa17.53■□□□□ 0.4
PVT1-208ENST00000519481 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.4
PVT1-208ENST00000519481 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
PVT1-208ENST00000519481 FER1L4A9Z1Z3 1794 aa17.52■□□□□ 0.4
PVT1-208ENST00000519481 SIGLEC1Q9BZZ2 1709 aa17.52■□□□□ 0.39
PVT1-208ENST00000519481 ZNF777Q9ULD5 760 aaPredicted RBP17.5■□□□□ 0.39
PVT1-208ENST00000519481 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
PVT1-208ENST00000519481 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
PVT1-208ENST00000519481 ABCC1P33527 1531 aa17.49■□□□□ 0.39
PVT1-208ENST00000519481 ESF1Q9H501 851 aaKnown RBP17.49■□□□□ 0.39
PVT1-208ENST00000519481 TRAPPC8Q9Y2L5 1435 aa17.48■□□□□ 0.39
PVT1-208ENST00000519481 HSPA2P54652 639 aa17.48■□□□□ 0.39
PVT1-208ENST00000519481 DIP2CQ9Y2E4 1556 aa17.47■□□□□ 0.39
PVT1-208ENST00000519481 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
PVT1-208ENST00000519481 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
PVT1-208ENST00000519481 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
PVT1-208ENST00000519481 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
PVT1-208ENST00000519481 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
PVT1-208ENST00000519481 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
PVT1-208ENST00000519481 FBXO41Q8TF61 875 aa17.44■□□□□ 0.38
PVT1-208ENST00000519481 GPATCH8Q9UKJ3 1502 aaKnown RBP17.43■□□□□ 0.38
PVT1-208ENST00000519481 CEBPAP49715 358 aaPredicted RBP17.43■□□□□ 0.38
PVT1-208ENST00000519481 SPAG9O60271 1321 aaKnown RBP17.43■□□□□ 0.38
PVT1-208ENST00000519481 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
PVT1-208ENST00000519481 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
PVT1-208ENST00000519481 AGLP35573 1532 aa17.42■□□□□ 0.38
PVT1-208ENST00000519481 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.381e-6■■■■□ 21.5
PVT1-208ENST00000519481 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
PVT1-208ENST00000519481 SAMD9LQ8IVG5 1584 aa17.39■□□□□ 0.37
PVT1-208ENST00000519481 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
PVT1-208ENST00000519481 KIAA1107Q9UPP5 1409 aa17.38■□□□□ 0.37
PVT1-208ENST00000519481 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
PVT1-208ENST00000519481 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
PVT1-208ENST00000519481 UHRF1BP1Q6BDS2 1440 aa17.38■□□□□ 0.37
PVT1-208ENST00000519481 CNTLNQ9NXG0 1405 aa17.37■□□□□ 0.37
PVT1-208ENST00000519481 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
PVT1-208ENST00000519481 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
PVT1-208ENST00000519481 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
PVT1-208ENST00000519481 ATP7AQ04656 1500 aa17.32■□□□□ 0.36
PVT1-208ENST00000519481 C3P01024 1663 aa17.3■□□□□ 0.36
PVT1-208ENST00000519481 A2MP01023 1474 aa17.3■□□□□ 0.36
PVT1-208ENST00000519481 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
PVT1-208ENST00000519481 CERKQ8TCT0 537 aa17.29■□□□□ 0.36
PVT1-208ENST00000519481 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
PVT1-208ENST00000519481 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
PVT1-208ENST00000519481 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.36
PVT1-208ENST00000519481 GGT6Q6P531 493 aa17.27■□□□□ 0.36
PVT1-208ENST00000519481 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
PVT1-208ENST00000519481 NPATQ14207 1427 aa17.25■□□□□ 0.35
PVT1-208ENST00000519481 RSPH4AQ5TD94 716 aa17.25■□□□□ 0.35
PVT1-208ENST00000519481 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
PVT1-208ENST00000519481 RTEL1-TNFRSF6BF6WH68 1400 aa17.24■□□□□ 0.35
PVT1-208ENST00000519481 MROH2AA6NES4 1674 aa17.24■□□□□ 0.35
PVT1-208ENST00000519481 NCOA2Q15596 1464 aa17.24■□□□□ 0.35
PVT1-208ENST00000519481 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
PVT1-208ENST00000519481 PLXNC1O60486 1568 aa17.23■□□□□ 0.35
PVT1-208ENST00000519481 LOC105371045A0A1W2PR82 267 aa17.23■□□□□ 0.35
PVT1-208ENST00000519481 ADGBQ8N7X0 1667 aa17.22■□□□□ 0.35
PVT1-208ENST00000519481 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
PVT1-208ENST00000519481 PTPRTO14522 1441 aa17.21■□□□□ 0.34
PVT1-208ENST00000519481 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
PVT1-208ENST00000519481 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
PVT1-208ENST00000519481 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
PVT1-208ENST00000519481 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
PVT1-208ENST00000519481 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
PVT1-208ENST00000519481 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
PVT1-208ENST00000519481 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
PVT1-208ENST00000519481 KIF3BO15066 747 aa17.17■□□□□ 0.34
PVT1-208ENST00000519481 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
PVT1-208ENST00000519481 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
PVT1-208ENST00000519481 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
PVT1-208ENST00000519481 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
PVT1-208ENST00000519481 APLP2Q06481 763 aa17.12■□□□□ 0.33
PVT1-208ENST00000519481 PKD2Q13563 968 aa17.12■□□□□ 0.33
PVT1-208ENST00000519481 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
PVT1-208ENST00000519481 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
PVT1-208ENST00000519481 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
PVT1-208ENST00000519481 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms