RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 REREQ9P2R6 1566 aa14.4□□□□□ -0.1
CTNNA1-215ENST00000519309 CDK13Q14004 1512 aaKnown RBP14.39□□□□□ -0.11
CTNNA1-215ENST00000519309 ATP10AO60312 1499 aa14.38□□□□□ -0.11
CTNNA1-215ENST00000519309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
CTNNA1-215ENST00000519309 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
CTNNA1-215ENST00000519309 PLCH2O75038 1416 aa14.38□□□□□ -0.11
CTNNA1-215ENST00000519309 SETD1BQ9UPS6 1966 aaKnown RBP14.38□□□□□ -0.11
CTNNA1-215ENST00000519309 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
CTNNA1-215ENST00000519309 EEA1Q15075 1411 aa14.37□□□□□ -0.11
CTNNA1-215ENST00000519309 SCAPERQ9BY12 1400 aa14.36□□□□□ -0.11
CTNNA1-215ENST00000519309 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
CTNNA1-215ENST00000519309 ZNF518AQ6AHZ1 1483 aa14.35□□□□□ -0.11
CTNNA1-215ENST00000519309 UHRF1BP1Q6BDS2 1440 aa14.34□□□□□ -0.11
CTNNA1-215ENST00000519309 C3P01024 1663 aa14.34□□□□□ -0.11
CTNNA1-215ENST00000519309 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
CTNNA1-215ENST00000519309 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
CTNNA1-215ENST00000519309 SOCS7O14512 581 aa14.33□□□□□ -0.12
CTNNA1-215ENST00000519309 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
CTNNA1-215ENST00000519309 KIF14Q15058 1648 aa14.33□□□□□ -0.12
CTNNA1-215ENST00000519309 PTPRTO14522 1441 aa14.32□□□□□ -0.12
CTNNA1-215ENST00000519309 ABCA6Q8N139 1617 aa14.32□□□□□ -0.12
CTNNA1-215ENST00000519309 LTBP4Q8N2S1 1624 aa14.31□□□□□ -0.12
CTNNA1-215ENST00000519309 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
CTNNA1-215ENST00000519309 AGLP35573 1532 aa14.3□□□□□ -0.12
CTNNA1-215ENST00000519309 MLECQ14165 292 aa14.29□□□□□ -0.12
CTNNA1-215ENST00000519309 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
CTNNA1-215ENST00000519309 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
CTNNA1-215ENST00000519309 LRRIQ1Q96JM4 1722 aa14.27□□□□□ -0.13
CTNNA1-215ENST00000519309 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.13
CTNNA1-215ENST00000519309 MROH2AA6NES4 1674 aa14.26□□□□□ -0.13
CTNNA1-215ENST00000519309 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
CTNNA1-215ENST00000519309 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
CTNNA1-215ENST00000519309 ARHGAP5Q13017 1502 aa14.26□□□□□ -0.13
CTNNA1-215ENST00000519309 MLH3Q9UHC1 1453 aa14.26□□□□□ -0.13
CTNNA1-215ENST00000519309 ABCC1P33527 1531 aa14.25□□□□□ -0.13
CTNNA1-215ENST00000519309 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
CTNNA1-215ENST00000519309 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
CTNNA1-215ENST00000519309 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
CTNNA1-215ENST00000519309 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
CTNNA1-215ENST00000519309 CEBPAP49715 358 aaPredicted RBP14.23□□□□□ -0.13
CTNNA1-215ENST00000519309 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
CTNNA1-215ENST00000519309 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
CTNNA1-215ENST00000519309 CNTLNQ9NXG0 1405 aa14.21□□□□□ -0.13
CTNNA1-215ENST00000519309 TRAPPC8Q9Y2L5 1435 aa14.21□□□□□ -0.13
CTNNA1-215ENST00000519309 CLIP1P30622 1438 aa14.2□□□□□ -0.14
CTNNA1-215ENST00000519309 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
CTNNA1-215ENST00000519309 NPATQ14207 1427 aa14.19□□□□□ -0.14
CTNNA1-215ENST00000519309 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-215ENST00000519309 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
CTNNA1-215ENST00000519309 MYO3AQ8NEV4 1616 aa14.18□□□□□ -0.14
CTNNA1-215ENST00000519309 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
CTNNA1-215ENST00000519309 PLA2R1Q13018 1463 aa14.15□□□□□ -0.14
CTNNA1-215ENST00000519309 AFAP1Q8N556 730 aa14.15□□□□□ -0.14
CTNNA1-215ENST00000519309 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
CTNNA1-215ENST00000519309 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
CTNNA1-215ENST00000519309 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
CTNNA1-215ENST00000519309 SUPT6HQ7KZ85 1726 aaKnown RBP14.14□□□□□ -0.15
CTNNA1-215ENST00000519309 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
CTNNA1-215ENST00000519309 CCDC18Q5T9S5 1454 aa14.12□□□□□ -0.15
CTNNA1-215ENST00000519309 INO80Q9ULG1 1556 aaPredicted RBP14.12□□□□□ -0.15
CTNNA1-215ENST00000519309 CEP170BQ9Y4F5 1589 aaPredicted RBP14.12□□□□□ -0.15
CTNNA1-215ENST00000519309 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-215ENST00000519309 SYCP2Q9BX26 1530 aa14.09□□□□□ -0.15
CTNNA1-215ENST00000519309 ATP7AQ04656 1500 aa14.08□□□□□ -0.16
CTNNA1-215ENST00000519309 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
CTNNA1-215ENST00000519309 ESF1Q9H501 851 aaKnown RBP14.07□□□□□ -0.16
CTNNA1-215ENST00000519309 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
CTNNA1-215ENST00000519309 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
CTNNA1-215ENST00000519309 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
CTNNA1-215ENST00000519309 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
CTNNA1-215ENST00000519309 ZNF335Q9H4Z2 1342 aaPredicted RBP14.04□□□□□ -0.16
CTNNA1-215ENST00000519309 ZMYM3Q14202 1370 aa14.04□□□□□ -0.16
CTNNA1-215ENST00000519309 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
CTNNA1-215ENST00000519309 PKD2Q13563 968 aa14.03□□□□□ -0.16
CTNNA1-215ENST00000519309 FYCO1Q9BQS8 1478 aa14.03□□□□□ -0.16
CTNNA1-215ENST00000519309 NEURL4Q96JN8 1562 aa14.03□□□□□ -0.16
CTNNA1-215ENST00000519309 DNMT1P26358 1616 aaKnown RBP14.02□□□□□ -0.16
CTNNA1-215ENST00000519309 CPS1P31327 1500 aa14.01□□□□□ -0.17
CTNNA1-215ENST00000519309 ATP1B4Q9UN42 357 aaPredicted RBP14.01□□□□□ -0.17
CTNNA1-215ENST00000519309 FAM135AQ9P2D6 1515 aa14□□□□□ -0.17
CTNNA1-215ENST00000519309 A2ML1A8K2U0 1454 aa14□□□□□ -0.17
CTNNA1-215ENST00000519309 A2MP01023 1474 aa14□□□□□ -0.17
CTNNA1-215ENST00000519309 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
CTNNA1-215ENST00000519309 KIAA1107Q9UPP5 1409 aa14□□□□□ -0.17
CTNNA1-215ENST00000519309 UBAP1LF5GYI3 381 aa14□□□□□ -0.17
CTNNA1-215ENST00000519309 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
CTNNA1-215ENST00000519309 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
CTNNA1-215ENST00000519309 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.17
CTNNA1-215ENST00000519309 UBTFP17480 764 aaKnown RBP13.96□□□□□ -0.17
CTNNA1-215ENST00000519309 ALKQ9UM73 1620 aa13.96□□□□□ -0.17
CTNNA1-215ENST00000519309 DEPDC5O75140 1603 aa13.94□□□□□ -0.18
CTNNA1-215ENST00000519309 VWDEQ8N2E2 1590 aa13.94□□□□□ -0.18
CTNNA1-215ENST00000519309 PPP6R1Q9UPN7 881 aa13.94□□□□□ -0.18
CTNNA1-215ENST00000519309 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
CTNNA1-215ENST00000519309 KDM5DQ9BY66 1539 aa13.92□□□□□ -0.18
CTNNA1-215ENST00000519309 PZPP20742 1482 aa13.92□□□□□ -0.18
CTNNA1-215ENST00000519309 SYNMO15061 1565 aa13.92□□□□□ -0.18
CTNNA1-215ENST00000519309 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
CTNNA1-215ENST00000519309 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-215ENST00000519309 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms