RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 GPATCH8Q9UKJ3 1502 aaKnown RBP32.21■■■□□ 2.75
TNFRSF10B-204ENST00000519028 PREX2Q70Z35 1606 aa32.2■■■□□ 2.75
TNFRSF10B-204ENST00000519028 KANK4Q5T7N3 995 aaPredicted RBP32.2■■■□□ 2.75
TNFRSF10B-204ENST00000519028 LRRC9Q6ZRR7 1453 aa32.2■■■□□ 2.75
TNFRSF10B-204ENST00000519028 DENND4BO75064 1496 aaPredicted RBP32.18■■■□□ 2.74
TNFRSF10B-204ENST00000519028 ADGRL1O94910 1474 aa32.17■■■□□ 2.74
TNFRSF10B-204ENST00000519028 SCAPERQ9BY12 1400 aa32.17■■■□□ 2.74
TNFRSF10B-204ENST00000519028 CCNB3Q8WWL7 1395 aa32.16■■■□□ 2.74
TNFRSF10B-204ENST00000519028 APLP2Q06481 763 aa32.15■■■□□ 2.74
TNFRSF10B-204ENST00000519028 FRMPD1Q5SYB0 1578 aa32.14■■■□□ 2.74
TNFRSF10B-204ENST00000519028 RICTORQ6R327 1708 aa32.12■■■□□ 2.73
TNFRSF10B-204ENST00000519028 SUPT6HQ7KZ85 1726 aaKnown RBP32.12■■■□□ 2.73
TNFRSF10B-204ENST00000519028 NCOA2Q15596 1464 aa32.11■■■□□ 2.73
TNFRSF10B-204ENST00000519028 CFDP1Q9UEE9 299 aaPredicted RBP32.09■■■□□ 2.73
TNFRSF10B-204ENST00000519028 ZNF777Q9ULD5 760 aaPredicted RBP32.06■■■□□ 2.72
TNFRSF10B-204ENST00000519028 POGZQ7Z3K3 1410 aa32.06■■■□□ 2.72
TNFRSF10B-204ENST00000519028 ARHGEF12Q9NZN5 1544 aa32.03■■■□□ 2.72
TNFRSF10B-204ENST00000519028 SAMD9LQ8IVG5 1584 aa32.02■■■□□ 2.72
TNFRSF10B-204ENST00000519028 ABCC1P33527 1531 aa32.01■■■□□ 2.72
TNFRSF10B-204ENST00000519028 AFAP1Q8N556 730 aa32.01■■■□□ 2.71
TNFRSF10B-204ENST00000519028 ITSN2Q9NZM3 1697 aa31.99■■■□□ 2.71
TNFRSF10B-204ENST00000519028 ZMYM4Q5VZL5 1548 aa31.99■■■□□ 2.71
TNFRSF10B-204ENST00000519028 ZNF518AQ6AHZ1 1483 aa31.97■■■□□ 2.71
TNFRSF10B-204ENST00000519028 ZNF644Q9H582 1327 aaPredicted RBP31.97■■■□□ 2.71
TNFRSF10B-204ENST00000519028 TRAPPC8Q9Y2L5 1435 aa31.96■■■□□ 2.71
TNFRSF10B-204ENST00000519028 HNRNPMP52272 730 aaKnown RBP eCLIP31.95■■■□□ 2.716e-8■■■□□ 15.2
TNFRSF10B-204ENST00000519028 MAGI2Q86UL8 1455 aa31.95■■■□□ 2.7
TNFRSF10B-204ENST00000519028 KIAA1107Q9UPP5 1409 aa31.94■■■□□ 2.7
TNFRSF10B-204ENST00000519028 PLEKHH2Q8IVE3 1493 aa31.92■■■□□ 2.7
TNFRSF10B-204ENST00000519028 KDM5CP41229 1560 aa31.92■■■□□ 2.7
TNFRSF10B-204ENST00000519028 YEATS2Q9ULM3 1422 aa31.91■■■□□ 2.7
TNFRSF10B-204ENST00000519028 SYCP2Q9BX26 1530 aa31.9■■■□□ 2.7
TNFRSF10B-204ENST00000519028 ZFYVE16Q7Z3T8 1539 aa31.88■■■□□ 2.69
TNFRSF10B-204ENST00000519028 ARHGEF40Q8TER5 1519 aa31.87■■■□□ 2.69
TNFRSF10B-204ENST00000519028 KDM4FA0A1W2PPD8 638 aa31.87■■■□□ 2.69
TNFRSF10B-204ENST00000519028 MYOM3Q5VTT5 1437 aa31.86■■■□□ 2.69
TNFRSF10B-204ENST00000519028 MBD5Q9P267 1494 aa31.84■■■□□ 2.69
TNFRSF10B-204ENST00000519028 MLH3Q9UHC1 1453 aa31.84■■■□□ 2.69
TNFRSF10B-204ENST00000519028 CAMSAP2Q08AD1 1489 aa31.82■■■□□ 2.68
TNFRSF10B-204ENST00000519028 MIA2Q96PC5 1412 aa31.82■■■□□ 2.68
TNFRSF10B-204ENST00000519028 MYT1LQ9UL68 1186 aa31.81■■■□□ 2.68
TNFRSF10B-204ENST00000519028 HECW2Q9P2P5 1572 aa31.81■■■□□ 2.68
TNFRSF10B-204ENST00000519028 ATP10AO60312 1499 aa31.78■■■□□ 2.68
TNFRSF10B-204ENST00000519028 SPAG9O60271 1321 aaKnown RBP31.76■■■□□ 2.68
TNFRSF10B-204ENST00000519028 KIDINS220Q9ULH0 1771 aa31.76■■■□□ 2.67
TNFRSF10B-204ENST00000519028 RSPH4AQ5TD94 716 aa31.75■■■□□ 2.67
TNFRSF10B-204ENST00000519028 ARID4BQ4LE39 1312 aaPredicted RBP31.74■■■□□ 2.67
TNFRSF10B-204ENST00000519028 DIP2CQ9Y2E4 1556 aa31.72■■■□□ 2.67
TNFRSF10B-204ENST00000519028 SIGLEC1Q9BZZ2 1709 aa31.72■■■□□ 2.67
TNFRSF10B-204ENST00000519028 C9orf84Q5VXU9 1444 aa31.71■■■□□ 2.67
TNFRSF10B-204ENST00000519028 ABCA6Q8N139 1617 aa31.71■■■□□ 2.67
TNFRSF10B-204ENST00000519028 PPARGC1BQ86YN6 1023 aaKnown RBP31.7■■■□□ 2.67
TNFRSF10B-204ENST00000519028 FGD6Q6ZV73 1430 aa31.68■■■□□ 2.66
TNFRSF10B-204ENST00000519028 CCDC141Q6ZP82 1450 aa31.68■■■□□ 2.66
TNFRSF10B-204ENST00000519028 ARHGEF5Q12774 1597 aa31.68■■■□□ 2.66
TNFRSF10B-204ENST00000519028 ATP7AQ04656 1500 aa31.67■■■□□ 2.66
TNFRSF10B-204ENST00000519028 AEBP2Q6ZN18 517 aaPredicted RBP31.67■■■□□ 2.66
TNFRSF10B-204ENST00000519028 INO80Q9ULG1 1556 aaPredicted RBP31.66■■■□□ 2.66
TNFRSF10B-204ENST00000519028 PTPN23Q9H3S7 1636 aa31.65■■■□□ 2.66
TNFRSF10B-204ENST00000519028 RTEL1-TNFRSF6BF6WH68 1400 aa31.65■■■□□ 2.66
TNFRSF10B-204ENST00000519028 REREQ9P2R6 1566 aa31.64■■■□□ 2.65
TNFRSF10B-204ENST00000519028 BCORL1Q5H9F3 1711 aa31.63■■■□□ 2.65
TNFRSF10B-204ENST00000519028 TCOF1Q13428 1488 aaKnown RBP31.62■■■□□ 2.65
TNFRSF10B-204ENST00000519028 TSPY4P0CV99 314 aa31.61■■■□□ 2.65
TNFRSF10B-204ENST00000519028 TSPY10P0CW01 314 aa31.61■■■□□ 2.65
TNFRSF10B-204ENST00000519028 ADAMTSL3P82987 1691 aa31.6■■■□□ 2.65
TNFRSF10B-204ENST00000519028 MLECQ14165 292 aa31.56■■■□□ 2.64
TNFRSF10B-204ENST00000519028 AGLP35573 1532 aa31.54■■■□□ 2.64
TNFRSF10B-204ENST00000519028 A2MP01023 1474 aa31.52■■■□□ 2.64
TNFRSF10B-204ENST00000519028 ABCC5O15440 1437 aa31.52■■■□□ 2.64
TNFRSF10B-204ENST00000519028 MAST1Q9Y2H9 1570 aa31.51■■■□□ 2.63
TNFRSF10B-204ENST00000519028 ADGBQ8N7X0 1667 aa31.5■■■□□ 2.63
TNFRSF10B-204ENST00000519028 FAM50AQ14320 339 aaKnown RBP31.49■■■□□ 2.63
TNFRSF10B-204ENST00000519028 MADDQ8WXG6 1647 aa31.49■■■□□ 2.63
TNFRSF10B-204ENST00000519028 PLXNC1O60486 1568 aa31.48■■■□□ 2.63
TNFRSF10B-204ENST00000519028 DAPK1P53355 1430 aa31.48■■■□□ 2.63
TNFRSF10B-204ENST00000519028 DHX29Q7Z478 1369 aaKnown RBP31.47■■■□□ 2.63
TNFRSF10B-204ENST00000519028 DNMT1P26358 1616 aaKnown RBP31.47■■■□□ 2.63
TNFRSF10B-204ENST00000519028 CROCC2H7BZ55 1655 aa31.43■■■□□ 2.62
TNFRSF10B-204ENST00000519028 PTPRMP28827 1452 aa31.42■■■□□ 2.62
TNFRSF10B-204ENST00000519028 SHANK2Q9UPX8 1470 aa31.42■■■□□ 2.62
TNFRSF10B-204ENST00000519028 RIMS1Q86UR5 1692 aaKnown RBP31.39■■■□□ 2.62
TNFRSF10B-204ENST00000519028 FER1L4A9Z1Z3 1794 aa31.38■■■□□ 2.61
TNFRSF10B-204ENST00000519028 CHIC2Q9UKJ5 165 aa31.37■■■□□ 2.61
TNFRSF10B-204ENST00000519028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.34■■■□□ 2.61
TNFRSF10B-204ENST00000519028 KIF3BO15066 747 aa31.33■■■□□ 2.61
TNFRSF10B-204ENST00000519028 GGT6Q6P531 493 aa31.33■■■□□ 2.61
TNFRSF10B-204ENST00000519028 RRP7BPQ9NSQ0 103 aa31.33■■■□□ 2.61
TNFRSF10B-204ENST00000519028 RRBP1Q9P2E9 1410 aaKnown RBP31.31■■■□□ 2.6
TNFRSF10B-204ENST00000519028 PTPRKQ15262 1439 aa31.3■■■□□ 2.6
TNFRSF10B-204ENST00000519028 KIF15Q9NS87 1388 aa31.3■■■□□ 2.6
TNFRSF10B-204ENST00000519028 NCOA1Q15788 1441 aa31.29■■■□□ 2.6
TNFRSF10B-204ENST00000519028 ANKRD30AQ9BXX3 1397 aa31.29■■■□□ 2.6
TNFRSF10B-204ENST00000519028 ESF1Q9H501 851 aaKnown RBP31.28■■■□□ 2.6
TNFRSF10B-204ENST00000519028 PPP6R1Q9UPN7 881 aa31.28■■■□□ 2.6
TNFRSF10B-204ENST00000519028 DUOX2Q9NRD8 1548 aa31.28■■■□□ 2.6
TNFRSF10B-204ENST00000519028 ADGRL2O95490 1459 aa31.26■■■□□ 2.59
TNFRSF10B-204ENST00000519028 CEBPAP49715 358 aaPredicted RBP31.24■■■□□ 2.59
TNFRSF10B-204ENST00000519028 PLPPR3Q6T4P5 718 aa31.24■■■□□ 2.59
TNFRSF10B-204ENST00000519028 CNTLNQ9NXG0 1405 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms