RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.44
PABPC1-208ENST00000519004 POGKQ9P215 609 aa17.83■□□□□ 0.44
PABPC1-208ENST00000519004 POLR1AO95602 1720 aaPredicted RBP17.83■□□□□ 0.44
PABPC1-208ENST00000519004 CLCN1P35523 988 aa17.82■□□□□ 0.44
PABPC1-208ENST00000519004 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
PABPC1-208ENST00000519004 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
PABPC1-208ENST00000519004 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
PABPC1-208ENST00000519004 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
PABPC1-208ENST00000519004 PNISRQ8TF01 805 aaKnown RBP17.78■□□□□ 0.44
PABPC1-208ENST00000519004 NAIPQ13075 1403 aa17.77■□□□□ 0.43
PABPC1-208ENST00000519004 KIF27Q86VH2 1401 aa17.77■□□□□ 0.43
PABPC1-208ENST00000519004 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
PABPC1-208ENST00000519004 RBM10P98175 930 aaKnown RBP17.75■□□□□ 0.43
PABPC1-208ENST00000519004 SPATA31E1Q6ZUB1 1445 aa17.75■□□□□ 0.43
PABPC1-208ENST00000519004 DENND4BO75064 1496 aaPredicted RBP17.74■□□□□ 0.43
PABPC1-208ENST00000519004 FGD6Q6ZV73 1430 aa17.74■□□□□ 0.43
PABPC1-208ENST00000519004 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
PABPC1-208ENST00000519004 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
PABPC1-208ENST00000519004 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
PABPC1-208ENST00000519004 AAMPQ13685 434 aa17.71■□□□□ 0.43
PABPC1-208ENST00000519004 CENPJQ9HC77 1338 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-208ENST00000519004 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-208ENST00000519004 FAM161AQ3B820 660 aa17.7■□□□□ 0.42
PABPC1-208ENST00000519004 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
PABPC1-208ENST00000519004 PRDM4Q9UKN5 801 aa17.7■□□□□ 0.42
PABPC1-208ENST00000519004 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
PABPC1-208ENST00000519004 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
PABPC1-208ENST00000519004 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
PABPC1-208ENST00000519004 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
PABPC1-208ENST00000519004 HECW1Q76N89 1606 aa17.67■□□□□ 0.42
PABPC1-208ENST00000519004 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
PABPC1-208ENST00000519004 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
PABPC1-208ENST00000519004 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
PABPC1-208ENST00000519004 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
PABPC1-208ENST00000519004 FSD2A1L4K1 749 aa17.65■□□□□ 0.42
PABPC1-208ENST00000519004 TMC1Q8TDI8 760 aa17.64■□□□□ 0.42
PABPC1-208ENST00000519004 PDCL3Q9H2J4 239 aa17.64■□□□□ 0.42
PABPC1-208ENST00000519004 PANK2Q9BZ23 570 aa17.64■□□□□ 0.41
PABPC1-208ENST00000519004 PLIN1O60240 522 aa17.63■□□□□ 0.41
PABPC1-208ENST00000519004 FGD1P98174 961 aa17.63■□□□□ 0.41
PABPC1-208ENST00000519004 CUX1P39880 1505 aa17.62■□□□□ 0.41
PABPC1-208ENST00000519004 GOLGA6L3A6NEY3 463 aa17.61■□□□□ 0.41
PABPC1-208ENST00000519004 TPM2P07951 284 aa17.6■□□□□ 0.41
PABPC1-208ENST00000519004 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
PABPC1-208ENST00000519004 ARXQ96QS3 562 aa17.6■□□□□ 0.41
PABPC1-208ENST00000519004 FYCO1Q9BQS8 1478 aa17.6■□□□□ 0.41
PABPC1-208ENST00000519004 TEX14Q8IWB6 1497 aa17.59■□□□□ 0.41
PABPC1-208ENST00000519004 MIA2Q96PC5 1412 aa17.58■□□□□ 0.41
PABPC1-208ENST00000519004 CENPQQ7L2Z9 268 aaPredicted RBP17.58■□□□□ 0.41
PABPC1-208ENST00000519004 BCORL1Q5H9F3 1711 aa17.58■□□□□ 0.4
PABPC1-208ENST00000519004 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.4
PABPC1-208ENST00000519004 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
PABPC1-208ENST00000519004 ERBB4Q15303 1308 aa17.57■□□□□ 0.4
PABPC1-208ENST00000519004 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
PABPC1-208ENST00000519004 RGS3P49796 1198 aa17.56■□□□□ 0.4
PABPC1-208ENST00000519004 USP19O94966 1318 aa17.56■□□□□ 0.4
PABPC1-208ENST00000519004 ESPNB1AK53 854 aa17.55■□□□□ 0.4
PABPC1-208ENST00000519004 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
PABPC1-208ENST00000519004 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
PABPC1-208ENST00000519004 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
PABPC1-208ENST00000519004 ANTXR1Q9H6X2 564 aa17.54■□□□□ 0.4
PABPC1-208ENST00000519004 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
PABPC1-208ENST00000519004 C20orf194Q5TEA3 1177 aa17.53■□□□□ 0.4
PABPC1-208ENST00000519004 RPRD2Q5VT52 1461 aaKnown RBP17.52■□□□□ 0.4
PABPC1-208ENST00000519004 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.4
PABPC1-208ENST00000519004 KDM6BO15054 1643 aa17.52■□□□□ 0.4
PABPC1-208ENST00000519004 IGF1RP08069 1367 aa17.52■□□□□ 0.39
PABPC1-208ENST00000519004 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.39
PABPC1-208ENST00000519004 VIRMAQ69YN4 1812 aaKnown RBP17.51■□□□□ 0.39
PABPC1-208ENST00000519004 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
PABPC1-208ENST00000519004 MPHOSPH9Q99550 1183 aa17.51■□□□□ 0.39
PABPC1-208ENST00000519004 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
PABPC1-208ENST00000519004 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
PABPC1-208ENST00000519004 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
PABPC1-208ENST00000519004 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
PABPC1-208ENST00000519004 KIF15Q9NS87 1388 aa17.49■□□□□ 0.39
PABPC1-208ENST00000519004 MRE11P49959 708 aa17.49■□□□□ 0.39
PABPC1-208ENST00000519004 FOXD1Q16676 465 aa17.49■□□□□ 0.39
PABPC1-208ENST00000519004 BECN1Q14457 450 aa17.48■□□□□ 0.39
PABPC1-208ENST00000519004 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
PABPC1-208ENST00000519004 ANKRD30BQ9BXX2 1392 aa17.47■□□□□ 0.39
PABPC1-208ENST00000519004 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
PABPC1-208ENST00000519004 PDE4CQ08493 712 aa17.46■□□□□ 0.39
PABPC1-208ENST00000519004 MYH16Q9H6N6 1097 aa17.45■□□□□ 0.38
PABPC1-208ENST00000519004 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
PABPC1-208ENST00000519004 USP47Q96K76 1375 aa17.45■□□□□ 0.38
PABPC1-208ENST00000519004 CARMIL1Q5VZK9 1371 aa17.44■□□□□ 0.38
PABPC1-208ENST00000519004 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
PABPC1-208ENST00000519004 MCM4P33991 863 aa17.43■□□□□ 0.38
PABPC1-208ENST00000519004 RALBP1Q15311 655 aa17.43■□□□□ 0.38
PABPC1-208ENST00000519004 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
PABPC1-208ENST00000519004 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
PABPC1-208ENST00000519004 GRPEL1Q9HAV7 217 aa17.43■□□□□ 0.38
PABPC1-208ENST00000519004 KDM5CP41229 1560 aa17.41■□□□□ 0.38
PABPC1-208ENST00000519004 SEC24BO95487 1268 aa17.41■□□□□ 0.38
PABPC1-208ENST00000519004 RIPK4P57078 832 aa17.41■□□□□ 0.38
PABPC1-208ENST00000519004 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
PABPC1-208ENST00000519004 CHIC2Q9UKJ5 165 aa17.4■□□□□ 0.38
PABPC1-208ENST00000519004 MBD5Q9P267 1494 aa17.39■□□□□ 0.37
PABPC1-208ENST00000519004 EFCAB5A4FU69 1503 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms