RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
LAMA4-211ENST00000518842 ATP10BO94823 1461 aa14.95□□□□□ -0.02
LAMA4-211ENST00000518842 COL17A1Q9UMD9 1497 aaPredicted RBP14.94□□□□□ -0.02
LAMA4-211ENST00000518842 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
LAMA4-211ENST00000518842 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
LAMA4-211ENST00000518842 TSPOAP1O95153 1857 aa14.93□□□□□ -0.02
LAMA4-211ENST00000518842 TEX14Q8IWB6 1497 aa14.92□□□□□ -0.02
LAMA4-211ENST00000518842 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
LAMA4-211ENST00000518842 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
LAMA4-211ENST00000518842 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
LAMA4-211ENST00000518842 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
LAMA4-211ENST00000518842 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
LAMA4-211ENST00000518842 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
LAMA4-211ENST00000518842 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
LAMA4-211ENST00000518842 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
LAMA4-211ENST00000518842 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
LAMA4-211ENST00000518842 CFAP43Q8NDM7 1665 aa14.86□□□□□ -0.03
LAMA4-211ENST00000518842 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
LAMA4-211ENST00000518842 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
LAMA4-211ENST00000518842 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
LAMA4-211ENST00000518842 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
LAMA4-211ENST00000518842 KDM4FA0A1W2PPD8 638 aa14.82□□□□□ -0.04
LAMA4-211ENST00000518842 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
LAMA4-211ENST00000518842 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
LAMA4-211ENST00000518842 PRKAR2AP13861 404 aaKnown RBP14.81□□□□□ -0.04
LAMA4-211ENST00000518842 ARAP3Q8WWN8 1544 aa14.78□□□□□ -0.04
LAMA4-211ENST00000518842 FMN1Q68DA7 1419 aa14.77□□□□□ -0.04
LAMA4-211ENST00000518842 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.04
LAMA4-211ENST00000518842 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
LAMA4-211ENST00000518842 EVX2Q03828 476 aa14.76□□□□□ -0.05
LAMA4-211ENST00000518842 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
LAMA4-211ENST00000518842 NEO1Q92859 1461 aa14.75□□□□□ -0.05
LAMA4-211ENST00000518842 CDK13Q14004 1512 aaKnown RBP14.74□□□□□ -0.05
LAMA4-211ENST00000518842 ADGRL1O94910 1474 aa14.71□□□□□ -0.05
LAMA4-211ENST00000518842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.71□□□□□ -0.06
LAMA4-211ENST00000518842 HECW1Q76N89 1606 aa14.7□□□□□ -0.06
LAMA4-211ENST00000518842 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
LAMA4-211ENST00000518842 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
LAMA4-211ENST00000518842 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
LAMA4-211ENST00000518842 RAPGEF3O95398 923 aa14.66□□□□□ -0.06
LAMA4-211ENST00000518842 CASKIN1Q8WXD9 1431 aa14.66□□□□□ -0.06
LAMA4-211ENST00000518842 FANCAO15360 1455 aa14.65□□□□□ -0.06
LAMA4-211ENST00000518842 TROQ12816 1431 aaPredicted RBP14.65□□□□□ -0.06
LAMA4-211ENST00000518842 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
LAMA4-211ENST00000518842 PLCH2O75038 1416 aa14.64□□□□□ -0.07
LAMA4-211ENST00000518842 DENND4BO75064 1496 aaPredicted RBP14.63□□□□□ -0.07
LAMA4-211ENST00000518842 CLIP1P30622 1438 aa14.62□□□□□ -0.07
LAMA4-211ENST00000518842 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
LAMA4-211ENST00000518842 PCF11O94913 1555 aaKnown RBP14.61□□□□□ -0.07
LAMA4-211ENST00000518842 ATP1B4Q9UN42 357 aaPredicted RBP14.61□□□□□ -0.07
LAMA4-211ENST00000518842 CFAP74Q9C0B2 1584 aa14.6□□□□□ -0.07
LAMA4-211ENST00000518842 CCDC18Q5T9S5 1454 aa14.6□□□□□ -0.07
LAMA4-211ENST00000518842 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
LAMA4-211ENST00000518842 PRR29P0C7W0 189 aa14.59□□□□□ -0.07
LAMA4-211ENST00000518842 ZMYM4Q5VZL5 1548 aa14.59□□□□□ -0.07
LAMA4-211ENST00000518842 KIF14Q15058 1648 aa14.59□□□□□ -0.07
LAMA4-211ENST00000518842 LRRIQ1Q96JM4 1722 aa14.58□□□□□ -0.08
LAMA4-211ENST00000518842 ARHGEF40Q8TER5 1519 aa14.57□□□□□ -0.08
LAMA4-211ENST00000518842 RICTORQ6R327 1708 aa14.57□□□□□ -0.08
LAMA4-211ENST00000518842 POGZQ7Z3K3 1410 aa14.57□□□□□ -0.08
LAMA4-211ENST00000518842 EFCAB2Q5VUJ9 269 aa14.55□□□□□ -0.08
LAMA4-211ENST00000518842 SCAPERQ9BY12 1400 aa14.55□□□□□ -0.08
LAMA4-211ENST00000518842 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
LAMA4-211ENST00000518842 YEATS2Q9ULM3 1422 aa14.53□□□□□ -0.08
LAMA4-211ENST00000518842 CHADLQ6NUI6 762 aa14.53□□□□□ -0.08
LAMA4-211ENST00000518842 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.09
LAMA4-211ENST00000518842 ZFYVE16Q7Z3T8 1539 aa14.51□□□□□ -0.09
LAMA4-211ENST00000518842 CEP162Q5TB80 1403 aa14.5□□□□□ -0.09
LAMA4-211ENST00000518842 MYO5CQ9NQX4 1742 aa14.5□□□□□ -0.09
LAMA4-211ENST00000518842 GABBR2O75899 941 aa14.5□□□□□ -0.09
LAMA4-211ENST00000518842 ARHGAP5Q13017 1502 aa14.49□□□□□ -0.09
LAMA4-211ENST00000518842 KDM5CP41229 1560 aa14.47□□□□□ -0.09
LAMA4-211ENST00000518842 BCORL1Q5H9F3 1711 aa14.47□□□□□ -0.09
LAMA4-211ENST00000518842 PTPRMP28827 1452 aa14.47□□□□□ -0.09
LAMA4-211ENST00000518842 ZNF518AQ6AHZ1 1483 aa14.47□□□□□ -0.09
LAMA4-211ENST00000518842 PREX2Q70Z35 1606 aa14.47□□□□□ -0.09
LAMA4-211ENST00000518842 ARHGEF12Q9NZN5 1544 aa14.46□□□□□ -0.09
LAMA4-211ENST00000518842 SIGLEC1Q9BZZ2 1709 aa14.45□□□□□ -0.1
LAMA4-211ENST00000518842 ABCC1P33527 1531 aa14.45□□□□□ -0.1
LAMA4-211ENST00000518842 GPATCH8Q9UKJ3 1502 aaKnown RBP14.45□□□□□ -0.1
LAMA4-211ENST00000518842 ATP10AO60312 1499 aa14.44□□□□□ -0.1
LAMA4-211ENST00000518842 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
LAMA4-211ENST00000518842 HECW2Q9P2P5 1572 aa14.44□□□□□ -0.1
LAMA4-211ENST00000518842 TRAPPC8Q9Y2L5 1435 aa14.44□□□□□ -0.1
LAMA4-211ENST00000518842 AFAP1Q8N556 730 aa14.44□□□□□ -0.1
LAMA4-211ENST00000518842 CDC42BPBQ9Y5S2 1711 aa14.44□□□□□ -0.1
LAMA4-211ENST00000518842 C9orf84Q5VXU9 1444 aa14.43□□□□□ -0.1
LAMA4-211ENST00000518842 MADDQ8WXG6 1647 aa14.43□□□□□ -0.1
LAMA4-211ENST00000518842 MLH3Q9UHC1 1453 aa14.43□□□□□ -0.1
LAMA4-211ENST00000518842 MTUS2Q5JR59 1369 aa14.4□□□□□ -0.1
LAMA4-211ENST00000518842 CDC42BPAQ5VT25 1732 aa14.4□□□□□ -0.1
LAMA4-211ENST00000518842 REREQ9P2R6 1566 aa14.39□□□□□ -0.11
LAMA4-211ENST00000518842 LOC105371045A0A1W2PR82 267 aa14.39□□□□□ -0.11
LAMA4-211ENST00000518842 KIAA1107Q9UPP5 1409 aa14.39□□□□□ -0.11
LAMA4-211ENST00000518842 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
LAMA4-211ENST00000518842 EHBP1L1Q8N3D4 1523 aa14.38□□□□□ -0.11
LAMA4-211ENST00000518842 SAMD9LQ8IVG5 1584 aa14.38□□□□□ -0.11
LAMA4-211ENST00000518842 ITSN2Q9NZM3 1697 aa14.37□□□□□ -0.11
LAMA4-211ENST00000518842 CLCN6P51797 869 aa14.37□□□□□ -0.11
LAMA4-211ENST00000518842 FARP1Q9Y4F1 1045 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms