RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 ABCA8O94911 1581 aa9.78□□□□□ -0.84
SPIDR-208ENST00000518711 FRMPD1Q5SYB0 1578 aa9.76□□□□□ -0.85
SPIDR-208ENST00000518711 AKNAQ7Z591 1439 aa9.76□□□□□ -0.85
SPIDR-208ENST00000518711 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
SPIDR-208ENST00000518711 NEO1Q92859 1461 aa9.74□□□□□ -0.85
SPIDR-208ENST00000518711 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
SPIDR-208ENST00000518711 PTPRKQ15262 1439 aa9.73□□□□□ -0.85
SPIDR-208ENST00000518711 ATP10BO94823 1461 aa9.72□□□□□ -0.85
SPIDR-208ENST00000518711 ARHGEF12Q9NZN5 1544 aa9.72□□□□□ -0.85
SPIDR-208ENST00000518711 SIGLEC1Q9BZZ2 1709 aa9.71□□□□□ -0.85
SPIDR-208ENST00000518711 PRXQ9BXM0 1461 aa9.71□□□□□ -0.86
SPIDR-208ENST00000518711 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
SPIDR-208ENST00000518711 PKD2Q13563 968 aa9.69□□□□□ -0.86
SPIDR-208ENST00000518711 CAMSAP1Q5T5Y3 1602 aa9.69□□□□□ -0.86
SPIDR-208ENST00000518711 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
SPIDR-208ENST00000518711 CTTNBP2Q8WZ74 1663 aa9.67□□□□□ -0.86
SPIDR-208ENST00000518711 TRAPPC8Q9Y2L5 1435 aa9.67□□□□□ -0.86
SPIDR-208ENST00000518711 FOXD1Q16676 465 aa9.67□□□□□ -0.86
SPIDR-208ENST00000518711 TRIM52Q96A61 297 aa9.67□□□□□ -0.86
SPIDR-208ENST00000518711 PPP6R1Q9UPN7 881 aa9.67□□□□□ -0.86
SPIDR-208ENST00000518711 DENND4BO75064 1496 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-208ENST00000518711 FHOD3Q2V2M9 1422 aa9.66□□□□□ -0.86
SPIDR-208ENST00000518711 ALKQ9UM73 1620 aa9.66□□□□□ -0.86
SPIDR-208ENST00000518711 CPS1P31327 1500 aa9.65□□□□□ -0.86
SPIDR-208ENST00000518711 ZFYVE16Q7Z3T8 1539 aa9.65□□□□□ -0.86
SPIDR-208ENST00000518711 MAGI2Q86UL8 1455 aa9.65□□□□□ -0.87
SPIDR-208ENST00000518711 PLEKHD1A6NEE1 506 aa9.64□□□□□ -0.87
SPIDR-208ENST00000518711 EFCAB5A4FU69 1503 aa9.63□□□□□ -0.87
SPIDR-208ENST00000518711 SETBP1Q9Y6X0 1596 aa9.61□□□□□ -0.87
SPIDR-208ENST00000518711 RICTORQ6R327 1708 aa9.6□□□□□ -0.87
SPIDR-208ENST00000518711 ZMYM4Q5VZL5 1548 aa9.6□□□□□ -0.87
SPIDR-208ENST00000518711 SHANK2Q9UPX8 1470 aa9.59□□□□□ -0.87
SPIDR-208ENST00000518711 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
SPIDR-208ENST00000518711 NUP153P49790 1475 aaKnown RBP9.59□□□□□ -0.87
SPIDR-208ENST00000518711 PLA2R1Q13018 1463 aa9.59□□□□□ -0.87
SPIDR-208ENST00000518711 RAPGEF6Q8TEU7 1601 aa9.58□□□□□ -0.88
SPIDR-208ENST00000518711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.58□□□□□ -0.88
SPIDR-208ENST00000518711 HNRNPUL2Q1KMD3 747 aaKnown RBP9.58□□□□□ -0.88
SPIDR-208ENST00000518711 CSRNP3Q8WYN3 585 aa9.58□□□□□ -0.88
SPIDR-208ENST00000518711 ESF1Q9H501 851 aaKnown RBP9.58□□□□□ -0.88
SPIDR-208ENST00000518711 ATP10AO60312 1499 aa9.58□□□□□ -0.88
SPIDR-208ENST00000518711 TCOF1Q13428 1488 aaKnown RBP9.58□□□□□ -0.88
SPIDR-208ENST00000518711 CFAP74Q9C0B2 1584 aa9.58□□□□□ -0.88
SPIDR-208ENST00000518711 YY1P25490 414 aa9.57□□□□□ -0.88
SPIDR-208ENST00000518711 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
SPIDR-208ENST00000518711 C3P01024 1663 aa9.57□□□□□ -0.88
SPIDR-208ENST00000518711 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
SPIDR-208ENST00000518711 C9orf84Q5VXU9 1444 aa9.56□□□□□ -0.88
SPIDR-208ENST00000518711 RXRBP28702 533 aa9.55□□□□□ -0.88
SPIDR-208ENST00000518711 ZNF772Q68DY9 489 aaPredicted RBP9.55□□□□□ -0.88
SPIDR-208ENST00000518711 PLCH2O75038 1416 aa9.55□□□□□ -0.88
SPIDR-208ENST00000518711 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
SPIDR-208ENST00000518711 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
SPIDR-208ENST00000518711 EFCAB2Q5VUJ9 269 aa9.53□□□□□ -0.88
SPIDR-208ENST00000518711 EEA1Q15075 1411 aa9.53□□□□□ -0.88
SPIDR-208ENST00000518711 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
SPIDR-208ENST00000518711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.52□□□□□ -0.88
SPIDR-208ENST00000518711 NPATQ14207 1427 aa9.51□□□□□ -0.89
SPIDR-208ENST00000518711 SCAPERQ9BY12 1400 aa9.51□□□□□ -0.89
SPIDR-208ENST00000518711 CDK11AQ9UQ88 783 aaPredicted RBP9.51□□□□□ -0.89
SPIDR-208ENST00000518711 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
SPIDR-208ENST00000518711 ZNF518AQ6AHZ1 1483 aa9.47□□□□□ -0.89
SPIDR-208ENST00000518711 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-208ENST00000518711 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-208ENST00000518711 NUTM2DQ5VT03 806 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-208ENST00000518711 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-208ENST00000518711 FAM135BQ49AJ0 1406 aa9.47□□□□□ -0.89
SPIDR-208ENST00000518711 REREQ9P2R6 1566 aa9.46□□□□□ -0.9
SPIDR-208ENST00000518711 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
SPIDR-208ENST00000518711 MEX3CQ5U5Q3 659 aaKnown RBP9.45□□□□□ -0.9
SPIDR-208ENST00000518711 CNTLNQ9NXG0 1405 aa9.45□□□□□ -0.9
SPIDR-208ENST00000518711 MLH3Q9UHC1 1453 aa9.45□□□□□ -0.9
SPIDR-208ENST00000518711 VWDEQ8N2E2 1590 aa9.45□□□□□ -0.9
SPIDR-208ENST00000518711 SLC34A2O95436 690 aa9.44□□□□□ -0.9
SPIDR-208ENST00000518711 FMN1Q68DA7 1419 aa9.44□□□□□ -0.9
SPIDR-208ENST00000518711 AGLP35573 1532 aa9.44□□□□□ -0.9
SPIDR-208ENST00000518711 KDM5CP41229 1560 aa9.44□□□□□ -0.9
SPIDR-208ENST00000518711 SUPT6HQ7KZ85 1726 aaKnown RBP9.43□□□□□ -0.9
SPIDR-208ENST00000518711 LRP5O75197 1615 aa9.43□□□□□ -0.9
SPIDR-208ENST00000518711 AFAP1Q8N556 730 aa9.43□□□□□ -0.9
SPIDR-208ENST00000518711 CEP170BQ9Y4F5 1589 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-208ENST00000518711 ZNF142P52746 1687 aaPredicted RBP9.42□□□□□ -0.9
SPIDR-208ENST00000518711 ZMYM3Q14202 1370 aa9.41□□□□□ -0.9
SPIDR-208ENST00000518711 JCADQ9P266 1359 aa9.41□□□□□ -0.9
SPIDR-208ENST00000518711 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.9
SPIDR-208ENST00000518711 ATAD2Q6PL18 1390 aa9.4□□□□□ -0.9
SPIDR-208ENST00000518711 CLIP1P30622 1438 aa9.39□□□□□ -0.91
SPIDR-208ENST00000518711 MYO5CQ9NQX4 1742 aa9.39□□□□□ -0.91
SPIDR-208ENST00000518711 RGS12O14924 1447 aa9.39□□□□□ -0.91
SPIDR-208ENST00000518711 MYO3AQ8NEV4 1616 aa9.38□□□□□ -0.91
SPIDR-208ENST00000518711 NEURL4Q96JN8 1562 aa9.38□□□□□ -0.91
SPIDR-208ENST00000518711 CDK13Q14004 1512 aaKnown RBP9.38□□□□□ -0.91
SPIDR-208ENST00000518711 ANKLE2Q86XL3 938 aa9.38□□□□□ -0.91
SPIDR-208ENST00000518711 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
SPIDR-208ENST00000518711 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
SPIDR-208ENST00000518711 CCDC125Q86Z20 511 aa9.37□□□□□ -0.91
SPIDR-208ENST00000518711 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
SPIDR-208ENST00000518711 SPATA31A6Q5VVP1 1343 aa9.36□□□□□ -0.91
SPIDR-208ENST00000518711 LRP6O75581 1613 aa9.36□□□□□ -0.91
SPIDR-208ENST00000518711 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms