RNA–Protein interactions for RNA: ENST00000518426.1

CLVS1-202, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 312 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-202ENST00000518426 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
CLVS1-202ENST00000518426 LMOD2Q6P5Q4 547 aa7.09□□□□□ -1.27
CLVS1-202ENST00000518426 TIMELESSQ9UNS1 1208 aa7.09□□□□□ -1.27
CLVS1-202ENST00000518426 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
CLVS1-202ENST00000518426 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLVS1-202ENST00000518426 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.06□□□□□ -1.28
CLVS1-202ENST00000518426 PPP1R37O75864 691 aa7.05□□□□□ -1.28
CLVS1-202ENST00000518426 EMP3P54852 163 aa7.05□□□□□ -1.28
CLVS1-202ENST00000518426 IRX5P78411 483 aaPredicted RBP7.04□□□□□ -1.28
CLVS1-202ENST00000518426 TMEM132AQ24JP5 1023 aa7.04□□□□□ -1.28
CLVS1-202ENST00000518426 IFNL1Q8IU54 200 aa7.04□□□□□ -1.28
CLVS1-202ENST00000518426 EFCAB3Q8N7B9 438 aa7.04□□□□□ -1.28
CLVS1-202ENST00000518426 TMEM106CQ9BVX2 250 aa7.04□□□□□ -1.28
CLVS1-202ENST00000518426 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
CLVS1-202ENST00000518426 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
CLVS1-202ENST00000518426 CABP2Q9NPB3 220 aa7.04□□□□□ -1.28
CLVS1-202ENST00000518426 NLRP6P59044 892 aa7.03□□□□□ -1.28
CLVS1-202ENST00000518426 FBXO22Q8NEZ5 403 aa7.02□□□□□ -1.29
CLVS1-202ENST00000518426 HS3ST6Q96QI5 342 aa7.02□□□□□ -1.29
CLVS1-202ENST00000518426 PHF8Q9UPP1 1060 aa7.02□□□□□ -1.29
CLVS1-202ENST00000518426 E2F4Q16254 413 aa7.01□□□□□ -1.29
CLVS1-202ENST00000518426 ARHGEF1Q92888 912 aaKnown RBP7.01□□□□□ -1.29
CLVS1-202ENST00000518426 SOX12O15370 315 aa7□□□□□ -1.29
CLVS1-202ENST00000518426 FAM205CA6NFA0 338 aa6.99□□□□□ -1.29
CLVS1-202ENST00000518426 OCEL1Q9H607 264 aa6.99□□□□□ -1.29
CLVS1-202ENST00000518426 POTEB3A0JP26 581 aa6.98□□□□□ -1.29
CLVS1-202ENST00000518426 POTEBQ6S5H4 581 aa6.98□□□□□ -1.29
CLVS1-202ENST00000518426 SEMA3EO15041 775 aa6.97□□□□□ -1.29
CLVS1-202ENST00000518426 ZC3H15Q8WU90 426 aaKnown RBP6.97□□□□□ -1.29
CLVS1-202ENST00000518426 TESPA1A2RU30 521 aaPredicted RBP6.95□□□□□ -1.3
CLVS1-202ENST00000518426 BRPF1P55201 1214 aaPredicted RBP6.95□□□□□ -1.3
CLVS1-202ENST00000518426 ERICH6Q7L0X2 663 aa6.95□□□□□ -1.3
CLVS1-202ENST00000518426 LARP6Q9BRS8 491 aaKnown RBP6.95□□□□□ -1.3
CLVS1-202ENST00000518426 NCKAP5LQ9HCH0 1330 aa6.95□□□□□ -1.3
CLVS1-202ENST00000518426 GOLGA2Q08379 1002 aa6.93□□□□□ -1.3
CLVS1-202ENST00000518426 NEUROD2Q15784 382 aa6.93□□□□□ -1.3
CLVS1-202ENST00000518426 RNF166Q96A37 237 aaPredicted RBP6.93□□□□□ -1.3
CLVS1-202ENST00000518426 SLC24A3Q9HC58 644 aa6.93□□□□□ -1.3
CLVS1-202ENST00000518426 PDE4AP27815 886 aa6.92□□□□□ -1.3
CLVS1-202ENST00000518426 C3orf67Q6ZVT6 689 aa6.92□□□□□ -1.3
CLVS1-202ENST00000518426 C14orf37Q86TY3 774 aa6.92□□□□□ -1.3
CLVS1-202ENST00000518426 MS4A4AQ96JQ5 239 aa6.92□□□□□ -1.3
CLVS1-202ENST00000518426 MFSD10Q14728 455 aa6.9□□□□□ -1.3
CLVS1-202ENST00000518426 SMYD5Q6GMV2 418 aa6.9□□□□□ -1.3
CLVS1-202ENST00000518426 DDX27Q96GQ7 796 aaKnown RBP6.9□□□□□ -1.3
CLVS1-202ENST00000518426 CRISPLD2Q9H0B8 497 aa6.89□□□□□ -1.31
CLVS1-202ENST00000518426 ZMYND10O75800 440 aa6.86□□□□□ -1.31
CLVS1-202ENST00000518426 MKRN3Q13064 507 aaKnown RBP6.86□□□□□ -1.31
CLVS1-202ENST00000518426 L3MBTL3Q96JM7 780 aaPredicted RBP6.86□□□□□ -1.31
CLVS1-202ENST00000518426 CAMK2BQ13554 666 aa6.84□□□□□ -1.31
CLVS1-202ENST00000518426 PDCD7Q8N8D1 485 aaKnown RBP6.84□□□□□ -1.31
CLVS1-202ENST00000518426 ARIH1Q9Y4X5 557 aaPredicted RBP6.84□□□□□ -1.31
CLVS1-202ENST00000518426 MYT1LQ9UL68 1186 aa6.83□□□□□ -1.32
CLVS1-202ENST00000518426 PPP1R15BQ5SWA1 713 aa6.82□□□□□ -1.32
CLVS1-202ENST00000518426 MLLT3P42568 568 aaPredicted RBP6.81□□□□□ -1.32
CLVS1-202ENST00000518426 RBM26Q5T8P6 1007 aaKnown RBP6.81□□□□□ -1.32
CLVS1-202ENST00000518426 BARGINQ6ZT62 677 aa6.81□□□□□ -1.32
CLVS1-202ENST00000518426 GPIHBP1Q8IV16 184 aa6.81□□□□□ -1.32
CLVS1-202ENST00000518426 ARXQ96QS3 562 aa6.8□□□□□ -1.32
CLVS1-202ENST00000518426 ERBB3P21860 1342 aa6.79□□□□□ -1.32
CLVS1-202ENST00000518426 HOXB1P14653 301 aaPredicted RBP6.79□□□□□ -1.32
CLVS1-202ENST00000518426 KRI1Q8N9T8 703 aaKnown RBP6.79□□□□□ -1.32
CLVS1-202ENST00000518426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLVS1-202ENST00000518426 DPYSL4O14531 572 aa6.78□□□□□ -1.32
CLVS1-202ENST00000518426 ZNF710Q8N1W2 664 aa6.78□□□□□ -1.32
CLVS1-202ENST00000518426 AK7Q96M32 723 aa6.78□□□□□ -1.32
CLVS1-202ENST00000518426 GPBP1L1Q9HC44 474 aaPredicted RBP6.77□□□□□ -1.33
CLVS1-202ENST00000518426 GPHNQ9NQX3 736 aaPredicted RBP6.77□□□□□ -1.33
CLVS1-202ENST00000518426 HOXB3P14651 431 aaPredicted RBP6.76□□□□□ -1.33
CLVS1-202ENST00000518426 DSG2Q14126 1118 aa6.75□□□□□ -1.33
CLVS1-202ENST00000518426 EMILIN3Q9NT22 766 aa6.75□□□□□ -1.33
CLVS1-202ENST00000518426 DPY19L2Q6NUT2 758 aa6.74□□□□□ -1.33
CLVS1-202ENST00000518426 ILDR1Q86SU0 546 aaPredicted RBP6.74□□□□□ -1.33
CLVS1-202ENST00000518426 SPDYE16A6NNV3 312 aaPredicted RBP6.73□□□□□ -1.33
CLVS1-202ENST00000518426 SUPT5HO00267 1087 aaKnown RBP6.73□□□□□ -1.33
CLVS1-202ENST00000518426 PTGER2P43116 358 aa6.73□□□□□ -1.33
CLVS1-202ENST00000518426 VARS2Q5ST30 1063 aaKnown RBP6.73□□□□□ -1.33
CLVS1-202ENST00000518426 MICALL2Q8IY33 904 aa6.73□□□□□ -1.33
CLVS1-202ENST00000518426 TMC2Q8TDI7 906 aa6.73□□□□□ -1.33
CLVS1-202ENST00000518426 PDIA6Q15084 440 aa6.72□□□□□ -1.33
CLVS1-202ENST00000518426 DOK7Q18PE1 504 aa6.72□□□□□ -1.33
CLVS1-202ENST00000518426 HOMEZQ8IX15 550 aa6.72□□□□□ -1.33
CLVS1-202ENST00000518426 IL27Q8NEV9 243 aa6.72□□□□□ -1.33
CLVS1-202ENST00000518426 G3V3G9 751 aa6.71□□□□□ -1.34
CLVS1-202ENST00000518426 KDM4CQ9H3R0 1056 aa6.71□□□□□ -1.34
CLVS1-202ENST00000518426 TRIM66O15016 1216 aa6.7□□□□□ -1.34
CLVS1-202ENST00000518426 FOXK1P85037 733 aa6.7□□□□□ -1.34
CLVS1-202ENST00000518426 PDE4DQ08499 809 aa6.7□□□□□ -1.34
CLVS1-202ENST00000518426 RIMBP2O15034 1052 aa6.69□□□□□ -1.34
CLVS1-202ENST00000518426 PLPP6Q8IY26 295 aa6.69□□□□□ -1.34
CLVS1-202ENST00000518426 ZNF687Q8N1G0 1237 aa6.69□□□□□ -1.34
CLVS1-202ENST00000518426 DAXXQ9UER7 740 aaPredicted RBP6.69□□□□□ -1.34
CLVS1-202ENST00000518426 GRXCR2A6NFK2 248 aa6.68□□□□□ -1.34
CLVS1-202ENST00000518426 BOLA1Q9Y3E2 137 aa6.68□□□□□ -1.34
CLVS1-202ENST00000518426 NUTM2FA1L443 756 aa6.67□□□□□ -1.34
CLVS1-202ENST00000518426 C2orf72A6NCS6 295 aa6.67□□□□□ -1.34
CLVS1-202ENST00000518426 GPR37O15354 613 aa6.67□□□□□ -1.34
CLVS1-202ENST00000518426 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
CLVS1-202ENST00000518426 PLA2G2EQ9NZK7 142 aa6.66□□□□□ -1.34
CLVS1-202ENST00000518426 UPF1Q92900 1129 aaKnown RBP eCLIP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms