RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 KCNH8Q96L42 1107 aa17.69■□□□□ 0.42
ARFGEF1-202ENST00000517955 DIP2BQ9P265 1576 aa17.68■□□□□ 0.42
ARFGEF1-202ENST00000517955 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
ARFGEF1-202ENST00000517955 GPATCH8Q9UKJ3 1502 aaKnown RBP17.65■□□□□ 0.42
ARFGEF1-202ENST00000517955 TTC37Q6PGP7 1564 aa17.65■□□□□ 0.42
ARFGEF1-202ENST00000517955 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
ARFGEF1-202ENST00000517955 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
ARFGEF1-202ENST00000517955 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
ARFGEF1-202ENST00000517955 PLCH2O75038 1416 aa17.64■□□□□ 0.41
ARFGEF1-202ENST00000517955 MYOM3Q5VTT5 1437 aa17.63■□□□□ 0.41
ARFGEF1-202ENST00000517955 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
ARFGEF1-202ENST00000517955 MAP3K4Q9Y6R4 1608 aa17.62■□□□□ 0.41
ARFGEF1-202ENST00000517955 CDC42BPAQ5VT25 1732 aa17.62■□□□□ 0.41
ARFGEF1-202ENST00000517955 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
ARFGEF1-202ENST00000517955 KIF13AQ9H1H9 1805 aa17.62■□□□□ 0.41
ARFGEF1-202ENST00000517955 ITSN2Q9NZM3 1697 aa17.61■□□□□ 0.41
ARFGEF1-202ENST00000517955 CD109Q6YHK3 1445 aa17.61■□□□□ 0.41
ARFGEF1-202ENST00000517955 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
ARFGEF1-202ENST00000517955 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
ARFGEF1-202ENST00000517955 PREX2Q70Z35 1606 aa17.6■□□□□ 0.41
ARFGEF1-202ENST00000517955 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.41
ARFGEF1-202ENST00000517955 RRBP1Q9P2E9 1410 aaKnown RBP17.58■□□□□ 0.41
ARFGEF1-202ENST00000517955 FGD6Q6ZV73 1430 aa17.57■□□□□ 0.4
ARFGEF1-202ENST00000517955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
ARFGEF1-202ENST00000517955 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
ARFGEF1-202ENST00000517955 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
ARFGEF1-202ENST00000517955 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
ARFGEF1-202ENST00000517955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
ARFGEF1-202ENST00000517955 ARHGAP5Q13017 1502 aa17.52■□□□□ 0.4
ARFGEF1-202ENST00000517955 NEO1Q92859 1461 aa17.52■□□□□ 0.4
ARFGEF1-202ENST00000517955 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.39
ARFGEF1-202ENST00000517955 PPRC1Q5VV67 1664 aaKnown RBP17.52■□□□□ 0.39
ARFGEF1-202ENST00000517955 FANCAO15360 1455 aa17.51■□□□□ 0.39
ARFGEF1-202ENST00000517955 TEX14Q8IWB6 1497 aa17.51■□□□□ 0.39
ARFGEF1-202ENST00000517955 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
ARFGEF1-202ENST00000517955 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
ARFGEF1-202ENST00000517955 PLEKHH2Q8IVE3 1493 aa17.5■□□□□ 0.39
ARFGEF1-202ENST00000517955 SAMD9LQ8IVG5 1584 aa17.48■□□□□ 0.39
ARFGEF1-202ENST00000517955 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
ARFGEF1-202ENST00000517955 RSPH4AQ5TD94 716 aa17.47■□□□□ 0.39
ARFGEF1-202ENST00000517955 CAMSAP2Q08AD1 1489 aa17.47■□□□□ 0.39
ARFGEF1-202ENST00000517955 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
ARFGEF1-202ENST00000517955 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.38
ARFGEF1-202ENST00000517955 MBD5Q9P267 1494 aa17.45■□□□□ 0.38
ARFGEF1-202ENST00000517955 ABCC1P33527 1531 aa17.45■□□□□ 0.38
ARFGEF1-202ENST00000517955 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
ARFGEF1-202ENST00000517955 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
ARFGEF1-202ENST00000517955 ARHGEF5Q12774 1597 aa17.44■□□□□ 0.38
ARFGEF1-202ENST00000517955 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
ARFGEF1-202ENST00000517955 ADGRL1O94910 1474 aa17.42■□□□□ 0.38
ARFGEF1-202ENST00000517955 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
ARFGEF1-202ENST00000517955 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
ARFGEF1-202ENST00000517955 FAM50AQ14320 339 aaKnown RBP17.4■□□□□ 0.38
ARFGEF1-202ENST00000517955 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.38
ARFGEF1-202ENST00000517955 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
ARFGEF1-202ENST00000517955 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
ARFGEF1-202ENST00000517955 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
ARFGEF1-202ENST00000517955 HNRNPMP52272 730 aaKnown RBP eCLIP17.38■□□□□ 0.37
ARFGEF1-202ENST00000517955 ABCC5O15440 1437 aa17.38■□□□□ 0.37
ARFGEF1-202ENST00000517955 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
ARFGEF1-202ENST00000517955 DAPK1P53355 1430 aa17.37■□□□□ 0.37
ARFGEF1-202ENST00000517955 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
ARFGEF1-202ENST00000517955 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
ARFGEF1-202ENST00000517955 POGZQ7Z3K3 1410 aa17.36■□□□□ 0.37
ARFGEF1-202ENST00000517955 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
ARFGEF1-202ENST00000517955 ZNF518AQ6AHZ1 1483 aa17.36■□□□□ 0.37
ARFGEF1-202ENST00000517955 RTEL1-TNFRSF6BF6WH68 1400 aa17.34■□□□□ 0.37
ARFGEF1-202ENST00000517955 KDM5CP41229 1560 aa17.34■□□□□ 0.37
ARFGEF1-202ENST00000517955 MAST1Q9Y2H9 1570 aa17.34■□□□□ 0.37
ARFGEF1-202ENST00000517955 RICTORQ6R327 1708 aa17.33■□□□□ 0.37
ARFGEF1-202ENST00000517955 CROCC2H7BZ55 1655 aa17.33■□□□□ 0.37
ARFGEF1-202ENST00000517955 TSPY4P0CV99 314 aa17.33■□□□□ 0.36
ARFGEF1-202ENST00000517955 TSPY10P0CW01 314 aa17.33■□□□□ 0.36
ARFGEF1-202ENST00000517955 COL17A1Q9UMD9 1497 aaPredicted RBP17.32■□□□□ 0.36
ARFGEF1-202ENST00000517955 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
ARFGEF1-202ENST00000517955 AFAP1Q8N556 730 aa17.32■□□□□ 0.36
ARFGEF1-202ENST00000517955 ROCK1Q13464 1354 aa17.31■□□□□ 0.36
ARFGEF1-202ENST00000517955 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
ARFGEF1-202ENST00000517955 MLH3Q9UHC1 1453 aa17.31■□□□□ 0.36
ARFGEF1-202ENST00000517955 FRMPD1Q5SYB0 1578 aa17.3■□□□□ 0.36
ARFGEF1-202ENST00000517955 ZMYM4Q5VZL5 1548 aa17.3■□□□□ 0.36
ARFGEF1-202ENST00000517955 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
ARFGEF1-202ENST00000517955 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
ARFGEF1-202ENST00000517955 MAGI2Q86UL8 1455 aa17.29■□□□□ 0.36
ARFGEF1-202ENST00000517955 RAPGEF3O95398 923 aa17.28■□□□□ 0.36
ARFGEF1-202ENST00000517955 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
ARFGEF1-202ENST00000517955 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
ARFGEF1-202ENST00000517955 NCOA1Q15788 1441 aa17.27■□□□□ 0.35
ARFGEF1-202ENST00000517955 INO80Q9ULG1 1556 aaPredicted RBP17.27■□□□□ 0.35
ARFGEF1-202ENST00000517955 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
ARFGEF1-202ENST00000517955 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
ARFGEF1-202ENST00000517955 PLXNC1O60486 1568 aa17.25■□□□□ 0.35
ARFGEF1-202ENST00000517955 HECW2Q9P2P5 1572 aa17.25■□□□□ 0.35
ARFGEF1-202ENST00000517955 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
ARFGEF1-202ENST00000517955 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
ARFGEF1-202ENST00000517955 KDM6BO15054 1643 aa17.25■□□□□ 0.35
ARFGEF1-202ENST00000517955 ATP7AQ04656 1500 aa17.24■□□□□ 0.35
ARFGEF1-202ENST00000517955 ITGAEP38570 1179 aa17.23■□□□□ 0.35
ARFGEF1-202ENST00000517955 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
ARFGEF1-202ENST00000517955 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms