RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
CD47-205ENST00000517766 ATAD2BQ9ULI0 1458 aa9.71□□□□□ -0.86
CD47-205ENST00000517766 CCDC88BA6NC98 1476 aa9.69□□□□□ -0.86
CD47-205ENST00000517766 NUBP1P53384 320 aa9.69□□□□□ -0.86
CD47-205ENST00000517766 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
CD47-205ENST00000517766 ZNF687Q8N1G0 1237 aa9.69□□□□□ -0.86
CD47-205ENST00000517766 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
CD47-205ENST00000517766 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
CD47-205ENST00000517766 L3MBTL3Q96JM7 780 aaPredicted RBP9.66□□□□□ -0.86
CD47-205ENST00000517766 CHGAP10645 457 aaKnown RBP9.64□□□□□ -0.87
CD47-205ENST00000517766 PAXIP1Q6ZW49 1069 aaPredicted RBP9.64□□□□□ -0.87
CD47-205ENST00000517766 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
CD47-205ENST00000517766 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
CD47-205ENST00000517766 HMGXB3Q12766 1538 aa9.64□□□□□ -0.87
CD47-205ENST00000517766 GSE1Q14687 1217 aa9.62□□□□□ -0.87
CD47-205ENST00000517766 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
CD47-205ENST00000517766 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
CD47-205ENST00000517766 NCAPD3P42695 1498 aa9.61□□□□□ -0.87
CD47-205ENST00000517766 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
CD47-205ENST00000517766 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
CD47-205ENST00000517766 IRX2Q9BZI1 471 aaPredicted RBP9.61□□□□□ -0.87
CD47-205ENST00000517766 RNF25Q96BH1 459 aaPredicted RBP9.6□□□□□ -0.87
CD47-205ENST00000517766 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
CD47-205ENST00000517766 HCSTQ9UBK5 93 aa9.56□□□□□ -0.88
CD47-205ENST00000517766 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
CD47-205ENST00000517766 PYGBP11216 843 aa9.52□□□□□ -0.89
CD47-205ENST00000517766 PRDM2Q13029 1718 aa9.52□□□□□ -0.89
CD47-205ENST00000517766 SPRYD3Q8NCJ5 442 aa9.52□□□□□ -0.89
CD47-205ENST00000517766 CC2D2AQ9P2K1 1620 aa9.52□□□□□ -0.89
CD47-205ENST00000517766 ABCC8Q09428 1581 aa9.51□□□□□ -0.89
CD47-205ENST00000517766 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
CD47-205ENST00000517766 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
CD47-205ENST00000517766 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
CD47-205ENST00000517766 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
CD47-205ENST00000517766 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
CD47-205ENST00000517766 RGS20O76081 388 aa9.47□□□□□ -0.89
CD47-205ENST00000517766 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
CD47-205ENST00000517766 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.9
CD47-205ENST00000517766 STK25O00506 426 aa9.45□□□□□ -0.9
CD47-205ENST00000517766 EEA1Q15075 1411 aa9.44□□□□□ -0.9
CD47-205ENST00000517766 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
CD47-205ENST00000517766 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
CD47-205ENST00000517766 CFTRP13569 1480 aa9.42□□□□□ -0.9
CD47-205ENST00000517766 LOC105371045A0A1W2PR82 267 aa9.42□□□□□ -0.9
CD47-205ENST00000517766 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
CD47-205ENST00000517766 DPY19L2Q6NUT2 758 aa9.42□□□□□ -0.9
CD47-205ENST00000517766 ILDR1Q86SU0 546 aaPredicted RBP9.42□□□□□ -0.9
CD47-205ENST00000517766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.9
CD47-205ENST00000517766 BIVM-ERCC5R4GMW8 1640 aa9.42□□□□□ -0.9
CD47-205ENST00000517766 SYNJ1O43426 1573 aa9.41□□□□□ -0.9
CD47-205ENST00000517766 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
CD47-205ENST00000517766 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
CD47-205ENST00000517766 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
CD47-205ENST00000517766 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
CD47-205ENST00000517766 RIMBP2O15034 1052 aa9.4□□□□□ -0.9
CD47-205ENST00000517766 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.9
CD47-205ENST00000517766 STK24Q9Y6E0 443 aa9.4□□□□□ -0.9
CD47-205ENST00000517766 TOP2BQ02880 1626 aa9.4□□□□□ -0.9
CD47-205ENST00000517766 FAM9AQ8IZU1 332 aaPredicted RBP9.39□□□□□ -0.91
CD47-205ENST00000517766 BCL11BQ9C0K0 894 aaPredicted RBP9.39□□□□□ -0.91
CD47-205ENST00000517766 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
CD47-205ENST00000517766 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
CD47-205ENST00000517766 CADPSQ9ULU8 1353 aa9.37□□□□□ -0.91
CD47-205ENST00000517766 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
CD47-205ENST00000517766 SOGA1O94964 1423 aa9.33□□□□□ -0.92
CD47-205ENST00000517766 POTEEQ6S8J3 1075 aa9.33□□□□□ -0.92
CD47-205ENST00000517766 BOLA1Q9Y3E2 137 aa9.33□□□□□ -0.92
CD47-205ENST00000517766 Q6ZNB5 142 aa9.32□□□□□ -0.92
CD47-205ENST00000517766 BCANQ96GW7 911 aa9.32□□□□□ -0.92
CD47-205ENST00000517766 DNAJC5Q9H3Z4 198 aa9.32□□□□□ -0.92
CD47-205ENST00000517766 LAMC3Q9Y6N6 1575 aa9.32□□□□□ -0.92
CD47-205ENST00000517766 KIF21BO75037 1637 aa9.31□□□□□ -0.92
CD47-205ENST00000517766 CUX1P39880 1505 aa9.31□□□□□ -0.92
CD47-205ENST00000517766 LCE2BO14633 110 aa9.29□□□□□ -0.92
CD47-205ENST00000517766 GOLGA2Q08379 1002 aa9.29□□□□□ -0.92
CD47-205ENST00000517766 RUSC2Q8N2Y8 1516 aa9.29□□□□□ -0.92
CD47-205ENST00000517766 GOLGA3Q08378 1498 aa9.28□□□□□ -0.92
CD47-205ENST00000517766 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
CD47-205ENST00000517766 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
CD47-205ENST00000517766 FANCD2Q9BXW9 1451 aa9.27□□□□□ -0.93
CD47-205ENST00000517766 TNIKQ9UKE5 1360 aa9.26□□□□□ -0.93
CD47-205ENST00000517766 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
CD47-205ENST00000517766 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
CD47-205ENST00000517766 PDAP1Q13442 181 aaKnown RBP9.25□□□□□ -0.93
CD47-205ENST00000517766 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
CD47-205ENST00000517766 PSEN1P49768 467 aa9.24□□□□□ -0.93
CD47-205ENST00000517766 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
CD47-205ENST00000517766 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
CD47-205ENST00000517766 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
CD47-205ENST00000517766 A0A0G2JS52 829 aa9.22□□□□□ -0.93
CD47-205ENST00000517766 ARSIQ5FYB1 569 aa9.22□□□□□ -0.93
CD47-205ENST00000517766 G3V3G9 751 aa9.21□□□□□ -0.94
CD47-205ENST00000517766 PDS5BQ9NTI5 1447 aa9.21□□□□□ -0.94
CD47-205ENST00000517766 NESP48681 1621 aa9.2□□□□□ -0.94
CD47-205ENST00000517766 PBX2P40425 430 aa9.2□□□□□ -0.94
CD47-205ENST00000517766 AXIN2Q9Y2T1 843 aa9.2□□□□□ -0.94
CD47-205ENST00000517766 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
CD47-205ENST00000517766 FGD5Q6ZNL6 1462 aa9.2□□□□□ -0.94
CD47-205ENST00000517766 LOC100996750A0A140TA64 210 aa9.19□□□□□ -0.94
CD47-205ENST00000517766 UBTFP17480 764 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms