RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 TROQ12816 1431 aaPredicted RBP13.96□□□□□ -0.17
EFCAB13-203ENST00000517484 MLECQ14165 292 aa13.96□□□□□ -0.17
EFCAB13-203ENST00000517484 GGT6Q6P531 493 aa13.95□□□□□ -0.18
EFCAB13-203ENST00000517484 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
EFCAB13-203ENST00000517484 SAMD9Q5K651 1589 aa13.93□□□□□ -0.18
EFCAB13-203ENST00000517484 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
EFCAB13-203ENST00000517484 RAPGEF3O95398 923 aa13.93□□□□□ -0.18
EFCAB13-203ENST00000517484 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
EFCAB13-203ENST00000517484 NUP155O75694 1391 aa13.92□□□□□ -0.18
EFCAB13-203ENST00000517484 CHD1O14646 1710 aa13.91□□□□□ -0.18
EFCAB13-203ENST00000517484 KIF3BO15066 747 aa13.9□□□□□ -0.18
EFCAB13-203ENST00000517484 SPAG9O60271 1321 aaKnown RBP13.88□□□□□ -0.19
EFCAB13-203ENST00000517484 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
EFCAB13-203ENST00000517484 EHBP1L1Q8N3D4 1523 aa13.88□□□□□ -0.19
EFCAB13-203ENST00000517484 MIER1Q8N108 512 aa13.86□□□□□ -0.19
EFCAB13-203ENST00000517484 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
EFCAB13-203ENST00000517484 ANKRD30AQ9BXX3 1397 aa13.85□□□□□ -0.19
EFCAB13-203ENST00000517484 GPATCH8Q9UKJ3 1502 aaKnown RBP13.85□□□□□ -0.19
EFCAB13-203ENST00000517484 NAIPQ13075 1403 aa13.85□□□□□ -0.19
EFCAB13-203ENST00000517484 ABCC5O15440 1437 aa13.84□□□□□ -0.19
EFCAB13-203ENST00000517484 ARHGAP5Q13017 1502 aa13.84□□□□□ -0.19
EFCAB13-203ENST00000517484 MAP3K1Q13233 1512 aa13.84□□□□□ -0.19
EFCAB13-203ENST00000517484 NUTM2DQ5VT03 806 aaPredicted RBP13.83□□□□□ -0.2
EFCAB13-203ENST00000517484 SUPT6HQ7KZ85 1726 aaKnown RBP13.83□□□□□ -0.2
EFCAB13-203ENST00000517484 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
EFCAB13-203ENST00000517484 KIF15Q9NS87 1388 aa13.82□□□□□ -0.2
EFCAB13-203ENST00000517484 DAPK1P53355 1430 aa13.82□□□□□ -0.2
EFCAB13-203ENST00000517484 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
EFCAB13-203ENST00000517484 SENP3-EIF4A1A0A087X0R7 540 aa13.81□□□□□ -0.2
EFCAB13-203ENST00000517484 KIF14Q15058 1648 aa13.8□□□□□ -0.2
EFCAB13-203ENST00000517484 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
EFCAB13-203ENST00000517484 PPP1R15AO75807 674 aaPredicted RBP13.8□□□□□ -0.2
EFCAB13-203ENST00000517484 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
EFCAB13-203ENST00000517484 CAMSAP2Q08AD1 1489 aa13.79□□□□□ -0.2
EFCAB13-203ENST00000517484 MIA2Q96PC5 1412 aa13.77□□□□□ -0.2
EFCAB13-203ENST00000517484 ANKRD50Q9ULJ7 1429 aa13.77□□□□□ -0.2
EFCAB13-203ENST00000517484 HFM1A2PYH4 1435 aa13.77□□□□□ -0.21
EFCAB13-203ENST00000517484 ASXL2Q76L83 1435 aa13.77□□□□□ -0.21
EFCAB13-203ENST00000517484 C9orf84Q5VXU9 1444 aa13.76□□□□□ -0.21
EFCAB13-203ENST00000517484 CFAP43Q8NDM7 1665 aa13.76□□□□□ -0.21
EFCAB13-203ENST00000517484 LRRIQ1Q96JM4 1722 aa13.75□□□□□ -0.21
EFCAB13-203ENST00000517484 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
EFCAB13-203ENST00000517484 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
EFCAB13-203ENST00000517484 BCANQ96GW7 911 aa13.72□□□□□ -0.21
EFCAB13-203ENST00000517484 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
EFCAB13-203ENST00000517484 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
EFCAB13-203ENST00000517484 TRAPPC8Q9Y2L5 1435 aa13.71□□□□□ -0.21
EFCAB13-203ENST00000517484 RSPH4AQ5TD94 716 aa13.71□□□□□ -0.21
EFCAB13-203ENST00000517484 ABCA8O94911 1581 aa13.71□□□□□ -0.21
EFCAB13-203ENST00000517484 CD109Q6YHK3 1445 aa13.71□□□□□ -0.21
EFCAB13-203ENST00000517484 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
EFCAB13-203ENST00000517484 ABCC2Q92887 1545 aa13.7□□□□□ -0.22
EFCAB13-203ENST00000517484 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
EFCAB13-203ENST00000517484 WASHC2CQ9Y4E1 1318 aa13.69□□□□□ -0.22
EFCAB13-203ENST00000517484 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
EFCAB13-203ENST00000517484 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.22
EFCAB13-203ENST00000517484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.68□□□□□ -0.22
EFCAB13-203ENST00000517484 AKNAQ7Z591 1439 aa13.66□□□□□ -0.22
EFCAB13-203ENST00000517484 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
EFCAB13-203ENST00000517484 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
EFCAB13-203ENST00000517484 FANCAO15360 1455 aa13.65□□□□□ -0.22
EFCAB13-203ENST00000517484 SAFB2Q14151 953 aaKnown RBP eCLIP13.65□□□□□ -0.22
EFCAB13-203ENST00000517484 KDM6BO15054 1643 aa13.65□□□□□ -0.22
EFCAB13-203ENST00000517484 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
EFCAB13-203ENST00000517484 PLCH2O75038 1416 aa13.64□□□□□ -0.23
EFCAB13-203ENST00000517484 WDR7Q9Y4E6 1490 aa13.64□□□□□ -0.23
EFCAB13-203ENST00000517484 ABCC10Q5T3U5 1492 aa13.63□□□□□ -0.23
EFCAB13-203ENST00000517484 CLASP1Q7Z460 1538 aa13.62□□□□□ -0.23
EFCAB13-203ENST00000517484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.62□□□□□ -0.23
EFCAB13-203ENST00000517484 ADGRL1O94910 1474 aa13.62□□□□□ -0.23
EFCAB13-203ENST00000517484 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
EFCAB13-203ENST00000517484 CCDC141Q6ZP82 1450 aa13.61□□□□□ -0.23
EFCAB13-203ENST00000517484 ANP32CO43423 234 aa13.61□□□□□ -0.23
EFCAB13-203ENST00000517484 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
EFCAB13-203ENST00000517484 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
EFCAB13-203ENST00000517484 STK26Q9P289 416 aa13.59□□□□□ -0.23
EFCAB13-203ENST00000517484 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
EFCAB13-203ENST00000517484 ARHGEF12Q9NZN5 1544 aa13.58□□□□□ -0.24
EFCAB13-203ENST00000517484 KDM5BQ9UGL1 1544 aa13.58□□□□□ -0.24
EFCAB13-203ENST00000517484 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
EFCAB13-203ENST00000517484 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
EFCAB13-203ENST00000517484 KANK1Q14678 1352 aa13.57□□□□□ -0.24
EFCAB13-203ENST00000517484 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
EFCAB13-203ENST00000517484 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
EFCAB13-203ENST00000517484 CENPBP07199 599 aaPredicted RBP13.56□□□□□ -0.24
EFCAB13-203ENST00000517484 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
EFCAB13-203ENST00000517484 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
EFCAB13-203ENST00000517484 ZCCHC11Q5TAX3 1644 aaKnown RBP13.55□□□□□ -0.24
EFCAB13-203ENST00000517484 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
EFCAB13-203ENST00000517484 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
EFCAB13-203ENST00000517484 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
EFCAB13-203ENST00000517484 SALL2Q9Y467 1007 aaPredicted RBP13.54□□□□□ -0.24
EFCAB13-203ENST00000517484 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
EFCAB13-203ENST00000517484 TMEM132EQ6IEE7 984 aa13.54□□□□□ -0.24
EFCAB13-203ENST00000517484 KIAA1107Q9UPP5 1409 aa13.52□□□□□ -0.24
EFCAB13-203ENST00000517484 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
EFCAB13-203ENST00000517484 ROCK2O75116 1388 aaKnown RBP13.51□□□□□ -0.25
EFCAB13-203ENST00000517484 TRAK1Q9UPV9 953 aa13.51□□□□□ -0.25
EFCAB13-203ENST00000517484 SAMD9LQ8IVG5 1584 aa13.5□□□□□ -0.25
EFCAB13-203ENST00000517484 CFAP70Q5T0N1 1121 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms