RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 RAPGEF3O95398 923 aa22.89■■□□□ 1.25
SCARNA21-201ENST00000517026 LRRC9Q6ZRR7 1453 aa22.89■■□□□ 1.25
SCARNA21-201ENST00000517026 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
SCARNA21-201ENST00000517026 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
SCARNA21-201ENST00000517026 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
SCARNA21-201ENST00000517026 ARHGAP5Q13017 1502 aa22.86■■□□□ 1.25
SCARNA21-201ENST00000517026 ZNF777Q9ULD5 760 aaPredicted RBP22.84■■□□□ 1.25
SCARNA21-201ENST00000517026 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.25
SCARNA21-201ENST00000517026 NCOA2Q15596 1464 aa22.83■■□□□ 1.25
SCARNA21-201ENST00000517026 SCAPERQ9BY12 1400 aa22.82■■□□□ 1.24
SCARNA21-201ENST00000517026 MYO5CQ9NQX4 1742 aa22.82■■□□□ 1.24
SCARNA21-201ENST00000517026 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
SCARNA21-201ENST00000517026 CFAP74Q9C0B2 1584 aa22.78■■□□□ 1.24
SCARNA21-201ENST00000517026 PREX2Q70Z35 1606 aa22.78■■□□□ 1.24
SCARNA21-201ENST00000517026 CDC42BPBQ9Y5S2 1711 aa22.77■■□□□ 1.24
SCARNA21-201ENST00000517026 CDC42BPAQ5VT25 1732 aa22.76■■□□□ 1.23
SCARNA21-201ENST00000517026 ZNF644Q9H582 1327 aaPredicted RBP22.76■■□□□ 1.23
SCARNA21-201ENST00000517026 SUPT6HQ7KZ85 1726 aaKnown RBP22.75■■□□□ 1.23
SCARNA21-201ENST00000517026 AFAP1Q8N556 730 aa22.75■■□□□ 1.23
SCARNA21-201ENST00000517026 ARHGEF12Q9NZN5 1544 aa22.73■■□□□ 1.23
SCARNA21-201ENST00000517026 FRMPD1Q5SYB0 1578 aa22.73■■□□□ 1.23
SCARNA21-201ENST00000517026 PPARGC1BQ86YN6 1023 aaKnown RBP22.73■■□□□ 1.23
SCARNA21-201ENST00000517026 POGZQ7Z3K3 1410 aa22.73■■□□□ 1.23
SCARNA21-201ENST00000517026 HNRNPMP52272 730 aaKnown RBP eCLIP22.72■■□□□ 1.23
SCARNA21-201ENST00000517026 TRAPPC8Q9Y2L5 1435 aa22.7■■□□□ 1.22
SCARNA21-201ENST00000517026 ADAMTSL3P82987 1691 aa22.68■■□□□ 1.22
SCARNA21-201ENST00000517026 SAMD9LQ8IVG5 1584 aa22.68■■□□□ 1.22
SCARNA21-201ENST00000517026 ABCC1P33527 1531 aa22.68■■□□□ 1.22
SCARNA21-201ENST00000517026 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
SCARNA21-201ENST00000517026 KIAA1107Q9UPP5 1409 aa22.65■■□□□ 1.22
SCARNA21-201ENST00000517026 RICTORQ6R327 1708 aa22.65■■□□□ 1.22
SCARNA21-201ENST00000517026 ZNF518AQ6AHZ1 1483 aa22.64■■□□□ 1.21
SCARNA21-201ENST00000517026 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.21
SCARNA21-201ENST00000517026 YEATS2Q9ULM3 1422 aa22.64■■□□□ 1.21
SCARNA21-201ENST00000517026 SYCP2Q9BX26 1530 aa22.63■■□□□ 1.21
SCARNA21-201ENST00000517026 PTPRMP28827 1452 aa22.63■■□□□ 1.21
SCARNA21-201ENST00000517026 MYT1LQ9UL68 1186 aa22.63■■□□□ 1.21
SCARNA21-201ENST00000517026 ITSN2Q9NZM3 1697 aa22.62■■□□□ 1.21
SCARNA21-201ENST00000517026 FBXO41Q8TF61 875 aa22.61■■□□□ 1.21
SCARNA21-201ENST00000517026 ZMYM4Q5VZL5 1548 aa22.61■■□□□ 1.21
SCARNA21-201ENST00000517026 CAMSAP2Q08AD1 1489 aa22.6■■□□□ 1.21
SCARNA21-201ENST00000517026 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
SCARNA21-201ENST00000517026 MIA2Q96PC5 1412 aa22.59■■□□□ 1.21
SCARNA21-201ENST00000517026 MAGI2Q86UL8 1455 aa22.59■■□□□ 1.21
SCARNA21-201ENST00000517026 KDM5CP41229 1560 aa22.58■■□□□ 1.2
SCARNA21-201ENST00000517026 SPAG9O60271 1321 aaKnown RBP22.57■■□□□ 1.2
SCARNA21-201ENST00000517026 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
SCARNA21-201ENST00000517026 BCORL1Q5H9F3 1711 aa22.55■■□□□ 1.2
SCARNA21-201ENST00000517026 FGD6Q6ZV73 1430 aa22.55■■□□□ 1.2
SCARNA21-201ENST00000517026 MLH3Q9UHC1 1453 aa22.54■■□□□ 1.2
SCARNA21-201ENST00000517026 ARHGEF40Q8TER5 1519 aa22.54■■□□□ 1.2
SCARNA21-201ENST00000517026 ARID4BQ4LE39 1312 aaPredicted RBP22.54■■□□□ 1.2
SCARNA21-201ENST00000517026 RSPH4AQ5TD94 716 aa22.52■■□□□ 1.2
SCARNA21-201ENST00000517026 ATP10AO60312 1499 aa22.51■■□□□ 1.19
SCARNA21-201ENST00000517026 MADDQ8WXG6 1647 aa22.49■■□□□ 1.19
SCARNA21-201ENST00000517026 CCDC141Q6ZP82 1450 aa22.49■■□□□ 1.19
SCARNA21-201ENST00000517026 LMTK3Q96Q04 1460 aa22.49■■□□□ 1.19
SCARNA21-201ENST00000517026 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
SCARNA21-201ENST00000517026 TSPY4P0CV99 314 aa22.47■■□□□ 1.19
SCARNA21-201ENST00000517026 TSPY10P0CW01 314 aa22.47■■□□□ 1.19
SCARNA21-201ENST00000517026 PTPN23Q9H3S7 1636 aa22.46■■□□□ 1.19
SCARNA21-201ENST00000517026 C9orf84Q5VXU9 1444 aa22.46■■□□□ 1.19
SCARNA21-201ENST00000517026 TCOF1Q13428 1488 aaKnown RBP22.46■■□□□ 1.19
SCARNA21-201ENST00000517026 DIP2CQ9Y2E4 1556 aa22.45■■□□□ 1.18
SCARNA21-201ENST00000517026 ARHGEF5Q12774 1597 aa22.44■■□□□ 1.18
SCARNA21-201ENST00000517026 MLECQ14165 292 aa22.44■■□□□ 1.18
SCARNA21-201ENST00000517026 KIDINS220Q9ULH0 1771 aa22.44■■□□□ 1.18
SCARNA21-201ENST00000517026 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
SCARNA21-201ENST00000517026 ATP7AQ04656 1500 aa22.43■■□□□ 1.18
SCARNA21-201ENST00000517026 RTEL1-TNFRSF6BF6WH68 1400 aa22.42■■□□□ 1.18
SCARNA21-201ENST00000517026 ABCC5O15440 1437 aa22.42■■□□□ 1.18
SCARNA21-201ENST00000517026 INO80Q9ULG1 1556 aaPredicted RBP22.41■■□□□ 1.18
SCARNA21-201ENST00000517026 SIGLEC1Q9BZZ2 1709 aa22.4■■□□□ 1.18
SCARNA21-201ENST00000517026 DAPK1P53355 1430 aa22.38■■□□□ 1.17
SCARNA21-201ENST00000517026 RIMS1Q86UR5 1692 aaKnown RBP22.37■■□□□ 1.17
SCARNA21-201ENST00000517026 CHIC2Q9UKJ5 165 aa22.37■■□□□ 1.17
SCARNA21-201ENST00000517026 A2MP01023 1474 aa22.36■■□□□ 1.17
SCARNA21-201ENST00000517026 REREQ9P2R6 1566 aa22.33■■□□□ 1.17
SCARNA21-201ENST00000517026 DHX29Q7Z478 1369 aaKnown RBP22.33■■□□□ 1.17
SCARNA21-201ENST00000517026 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
SCARNA21-201ENST00000517026 ITGAEP38570 1179 aa22.31■■□□□ 1.16
SCARNA21-201ENST00000517026 DNMT1P26358 1616 aaKnown RBP22.31■■□□□ 1.16
SCARNA21-201ENST00000517026 AGLP35573 1532 aa22.31■■□□□ 1.16
SCARNA21-201ENST00000517026 MAST1Q9Y2H9 1570 aa22.3■■□□□ 1.16
SCARNA21-201ENST00000517026 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
SCARNA21-201ENST00000517026 PTPRKQ15262 1439 aa22.3■■□□□ 1.16
SCARNA21-201ENST00000517026 HSPA2P54652 639 aa22.29■■□□□ 1.16
SCARNA21-201ENST00000517026 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
SCARNA21-201ENST00000517026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.27■■□□□ 1.16
SCARNA21-201ENST00000517026 KIF3BO15066 747 aa22.27■■□□□ 1.16
SCARNA21-201ENST00000517026 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
SCARNA21-201ENST00000517026 GGT6Q6P531 493 aa22.27■■□□□ 1.16
SCARNA21-201ENST00000517026 KIF15Q9NS87 1388 aa22.26■■□□□ 1.15
SCARNA21-201ENST00000517026 ANKRD30AQ9BXX3 1397 aa22.25■■□□□ 1.15
SCARNA21-201ENST00000517026 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
SCARNA21-201ENST00000517026 ADGBQ8N7X0 1667 aa22.23■■□□□ 1.15
SCARNA21-201ENST00000517026 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
SCARNA21-201ENST00000517026 CROCC2H7BZ55 1655 aa22.22■■□□□ 1.15
SCARNA21-201ENST00000517026 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
SCARNA21-201ENST00000517026 CERKQ8TCT0 537 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms