RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 CFAP74Q9C0B2 1584 aa17.53■□□□□ 0.4
SCARNA20-201ENST00000516768 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
SCARNA20-201ENST00000516768 MAP3K1Q13233 1512 aa17.53■□□□□ 0.4
SCARNA20-201ENST00000516768 MYO5CQ9NQX4 1742 aa17.53■□□□□ 0.4
SCARNA20-201ENST00000516768 AFAP1Q8N556 730 aa17.52■□□□□ 0.4
SCARNA20-201ENST00000516768 ZNF777Q9ULD5 760 aaPredicted RBP17.52■□□□□ 0.4
SCARNA20-201ENST00000516768 TIAM1Q13009 1591 aa17.52■□□□□ 0.39
SCARNA20-201ENST00000516768 LRRC9Q6ZRR7 1453 aa17.5■□□□□ 0.39
SCARNA20-201ENST00000516768 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
SCARNA20-201ENST00000516768 KDM4FA0A1W2PPD8 638 aa17.5■□□□□ 0.39
SCARNA20-201ENST00000516768 EHBP1L1Q8N3D4 1523 aa17.5■□□□□ 0.39
SCARNA20-201ENST00000516768 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCARNA20-201ENST00000516768 FRMPD1Q5SYB0 1578 aa17.47■□□□□ 0.39
SCARNA20-201ENST00000516768 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
SCARNA20-201ENST00000516768 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
SCARNA20-201ENST00000516768 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
SCARNA20-201ENST00000516768 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.38
SCARNA20-201ENST00000516768 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
SCARNA20-201ENST00000516768 MAGI2Q86UL8 1455 aa17.45■□□□□ 0.38
SCARNA20-201ENST00000516768 RICTORQ6R327 1708 aa17.45■□□□□ 0.38
SCARNA20-201ENST00000516768 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
SCARNA20-201ENST00000516768 ARHGEF12Q9NZN5 1544 aa17.45■□□□□ 0.38
SCARNA20-201ENST00000516768 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
SCARNA20-201ENST00000516768 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
SCARNA20-201ENST00000516768 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
SCARNA20-201ENST00000516768 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
SCARNA20-201ENST00000516768 YEATS2Q9ULM3 1422 aa17.41■□□□□ 0.38
SCARNA20-201ENST00000516768 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
SCARNA20-201ENST00000516768 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
SCARNA20-201ENST00000516768 PLEKHH2Q8IVE3 1493 aa17.4■□□□□ 0.38
SCARNA20-201ENST00000516768 ABCC1P33527 1531 aa17.39■□□□□ 0.37
SCARNA20-201ENST00000516768 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.37
SCARNA20-201ENST00000516768 SAMD9LQ8IVG5 1584 aa17.39■□□□□ 0.37
SCARNA20-201ENST00000516768 ARID4BQ4LE39 1312 aaPredicted RBP17.39■□□□□ 0.37
SCARNA20-201ENST00000516768 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
SCARNA20-201ENST00000516768 ATP10AO60312 1499 aa17.37■□□□□ 0.37
SCARNA20-201ENST00000516768 KDM5CP41229 1560 aa17.36■□□□□ 0.37
SCARNA20-201ENST00000516768 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
SCARNA20-201ENST00000516768 ZFYVE16Q7Z3T8 1539 aa17.36■□□□□ 0.37
SCARNA20-201ENST00000516768 MBD5Q9P267 1494 aa17.35■□□□□ 0.37
SCARNA20-201ENST00000516768 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.37
SCARNA20-201ENST00000516768 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
SCARNA20-201ENST00000516768 MYOM3Q5VTT5 1437 aa17.33■□□□□ 0.36
SCARNA20-201ENST00000516768 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
SCARNA20-201ENST00000516768 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
SCARNA20-201ENST00000516768 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
SCARNA20-201ENST00000516768 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
SCARNA20-201ENST00000516768 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
SCARNA20-201ENST00000516768 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
SCARNA20-201ENST00000516768 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
SCARNA20-201ENST00000516768 MLECQ14165 292 aa17.28■□□□□ 0.36
SCARNA20-201ENST00000516768 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
SCARNA20-201ENST00000516768 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
SCARNA20-201ENST00000516768 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
SCARNA20-201ENST00000516768 DIP2CQ9Y2E4 1556 aa17.24■□□□□ 0.35
SCARNA20-201ENST00000516768 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
SCARNA20-201ENST00000516768 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
SCARNA20-201ENST00000516768 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
SCARNA20-201ENST00000516768 ATP7AQ04656 1500 aa17.22■□□□□ 0.35
SCARNA20-201ENST00000516768 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
SCARNA20-201ENST00000516768 SIGLEC1Q9BZZ2 1709 aa17.22■□□□□ 0.35
SCARNA20-201ENST00000516768 REREQ9P2R6 1566 aa17.22■□□□□ 0.35
SCARNA20-201ENST00000516768 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
SCARNA20-201ENST00000516768 ARHGEF5Q12774 1597 aa17.21■□□□□ 0.35
SCARNA20-201ENST00000516768 AGLP35573 1532 aa17.21■□□□□ 0.34
SCARNA20-201ENST00000516768 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
SCARNA20-201ENST00000516768 A2MP01023 1474 aa17.19■□□□□ 0.34
SCARNA20-201ENST00000516768 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
SCARNA20-201ENST00000516768 PTPRMP28827 1452 aa17.18■□□□□ 0.34
SCARNA20-201ENST00000516768 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
SCARNA20-201ENST00000516768 ABCC5O15440 1437 aa17.17■□□□□ 0.34
SCARNA20-201ENST00000516768 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
SCARNA20-201ENST00000516768 PTPN23Q9H3S7 1636 aa17.17■□□□□ 0.34
SCARNA20-201ENST00000516768 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
SCARNA20-201ENST00000516768 GGT6Q6P531 493 aa17.15■□□□□ 0.34
SCARNA20-201ENST00000516768 ESF1Q9H501 851 aaKnown RBP17.15■□□□□ 0.34
SCARNA20-201ENST00000516768 KIF3BO15066 747 aa17.14■□□□□ 0.33
SCARNA20-201ENST00000516768 MADDQ8WXG6 1647 aa17.13■□□□□ 0.33
SCARNA20-201ENST00000516768 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
SCARNA20-201ENST00000516768 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
SCARNA20-201ENST00000516768 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
SCARNA20-201ENST00000516768 DAPK1P53355 1430 aa17.12■□□□□ 0.33
SCARNA20-201ENST00000516768 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
SCARNA20-201ENST00000516768 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
SCARNA20-201ENST00000516768 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
SCARNA20-201ENST00000516768 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
SCARNA20-201ENST00000516768 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
SCARNA20-201ENST00000516768 SHANK2Q9UPX8 1470 aa17.07■□□□□ 0.32
SCARNA20-201ENST00000516768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCARNA20-201ENST00000516768 NCOA1Q15788 1441 aa17.06■□□□□ 0.32
SCARNA20-201ENST00000516768 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
SCARNA20-201ENST00000516768 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
SCARNA20-201ENST00000516768 ANKRD30AQ9BXX3 1397 aa17.06■□□□□ 0.32
SCARNA20-201ENST00000516768 DNMT1P26358 1616 aaKnown RBP17.06■□□□□ 0.32
SCARNA20-201ENST00000516768 FER1L4A9Z1Z3 1794 aa17.05■□□□□ 0.32
SCARNA20-201ENST00000516768 KIF15Q9NS87 1388 aa17.04■□□□□ 0.32
SCARNA20-201ENST00000516768 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
SCARNA20-201ENST00000516768 PTPRKQ15262 1439 aa17.03■□□□□ 0.32
SCARNA20-201ENST00000516768 DUOX2Q9NRD8 1548 aa17.02■□□□□ 0.32
SCARNA20-201ENST00000516768 ITGAEP38570 1179 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms