RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 ABCA8O94911 1581 aa10.42□□□□□ -0.74
SCARNA21.2-201ENST00000516600 CARMIL1Q5VZK9 1371 aa10.41□□□□□ -0.74
SCARNA21.2-201ENST00000516600 SENP3Q9H4L4 574 aaPredicted RBP10.41□□□□□ -0.74
SCARNA21.2-201ENST00000516600 MAGI2Q86UL8 1455 aa10.41□□□□□ -0.74
SCARNA21.2-201ENST00000516600 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
SCARNA21.2-201ENST00000516600 SETD1AO15047 1707 aaKnown RBP10.4□□□□□ -0.74
SCARNA21.2-201ENST00000516600 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.75
SCARNA21.2-201ENST00000516600 ARID3CA6NKF2 412 aa10.39□□□□□ -0.75
SCARNA21.2-201ENST00000516600 POTEAQ6S8J7 498 aa10.39□□□□□ -0.75
SCARNA21.2-201ENST00000516600 NCKAP5LQ9HCH0 1330 aa10.38□□□□□ -0.75
SCARNA21.2-201ENST00000516600 TRAPPC8Q9Y2L5 1435 aa10.37□□□□□ -0.75
SCARNA21.2-201ENST00000516600 PTPRKQ15262 1439 aa10.36□□□□□ -0.75
SCARNA21.2-201ENST00000516600 C9orf84Q5VXU9 1444 aa10.36□□□□□ -0.75
SCARNA21.2-201ENST00000516600 CFAP74Q9C0B2 1584 aa10.35□□□□□ -0.75
SCARNA21.2-201ENST00000516600 C3P01024 1663 aa10.35□□□□□ -0.75
SCARNA21.2-201ENST00000516600 ATP10AO60312 1499 aa10.35□□□□□ -0.75
SCARNA21.2-201ENST00000516600 HECW1Q76N89 1606 aa10.34□□□□□ -0.75
SCARNA21.2-201ENST00000516600 PKD2Q13563 968 aa10.34□□□□□ -0.75
SCARNA21.2-201ENST00000516600 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
SCARNA21.2-201ENST00000516600 PPP6R1Q9UPN7 881 aa10.34□□□□□ -0.75
SCARNA21.2-201ENST00000516600 CPS1P31327 1500 aa10.33□□□□□ -0.76
SCARNA21.2-201ENST00000516600 ESF1Q9H501 851 aaKnown RBP10.33□□□□□ -0.76
SCARNA21.2-201ENST00000516600 ATP10BO94823 1461 aa10.32□□□□□ -0.76
SCARNA21.2-201ENST00000516600 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
SCARNA21.2-201ENST00000516600 FAM9AQ8IZU1 332 aaPredicted RBP10.3□□□□□ -0.76
SCARNA21.2-201ENST00000516600 PLA2R1Q13018 1463 aa10.3□□□□□ -0.76
SCARNA21.2-201ENST00000516600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
SCARNA21.2-201ENST00000516600 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
SCARNA21.2-201ENST00000516600 ALKQ9UM73 1620 aa10.28□□□□□ -0.76
SCARNA21.2-201ENST00000516600 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
SCARNA21.2-201ENST00000516600 SHANK2Q9UPX8 1470 aa10.26□□□□□ -0.77
SCARNA21.2-201ENST00000516600 SUPT6HQ7KZ85 1726 aaKnown RBP10.26□□□□□ -0.77
SCARNA21.2-201ENST00000516600 RAPGEF2Q9Y4G8 1499 aa10.25□□□□□ -0.77
SCARNA21.2-201ENST00000516600 NPATQ14207 1427 aa10.24□□□□□ -0.77
SCARNA21.2-201ENST00000516600 SCAPERQ9BY12 1400 aa10.24□□□□□ -0.77
SCARNA21.2-201ENST00000516600 CNTLNQ9NXG0 1405 aa10.24□□□□□ -0.77
SCARNA21.2-201ENST00000516600 ZNF142P52746 1687 aaPredicted RBP10.22□□□□□ -0.77
SCARNA21.2-201ENST00000516600 MYO3AQ8NEV4 1616 aa10.2□□□□□ -0.78
SCARNA21.2-201ENST00000516600 TRIM52Q96A61 297 aa10.2□□□□□ -0.78
SCARNA21.2-201ENST00000516600 MYT1LQ9UL68 1186 aa10.2□□□□□ -0.78
SCARNA21.2-201ENST00000516600 CEP170BQ9Y4F5 1589 aaPredicted RBP10.2□□□□□ -0.78
SCARNA21.2-201ENST00000516600 AGLP35573 1532 aa10.19□□□□□ -0.78
SCARNA21.2-201ENST00000516600 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
SCARNA21.2-201ENST00000516600 RNF17Q9BXT8 1623 aaKnown RBP10.18□□□□□ -0.78
SCARNA21.2-201ENST00000516600 CTTNBP2Q8WZ74 1663 aa10.18□□□□□ -0.78
SCARNA21.2-201ENST00000516600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.78
SCARNA21.2-201ENST00000516600 REREQ9P2R6 1566 aa10.17□□□□□ -0.78
SCARNA21.2-201ENST00000516600 PLEKHD1A6NEE1 506 aa10.16□□□□□ -0.78
SCARNA21.2-201ENST00000516600 FOXD1Q16676 465 aa10.16□□□□□ -0.78
SCARNA21.2-201ENST00000516600 LRRC7Q96NW7 1537 aa10.16□□□□□ -0.78
SCARNA21.2-201ENST00000516600 MROH2AA6NES4 1674 aa10.15□□□□□ -0.78
SCARNA21.2-201ENST00000516600 VWDEQ8N2E2 1590 aa10.15□□□□□ -0.78
SCARNA21.2-201ENST00000516600 DIP2CQ9Y2E4 1556 aa10.15□□□□□ -0.78
SCARNA21.2-201ENST00000516600 POLR1AO95602 1720 aaPredicted RBP10.15□□□□□ -0.78
SCARNA21.2-201ENST00000516600 ZNF518AQ6AHZ1 1483 aa10.15□□□□□ -0.78
SCARNA21.2-201ENST00000516600 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.79
SCARNA21.2-201ENST00000516600 ZMYM3Q14202 1370 aa10.14□□□□□ -0.79
SCARNA21.2-201ENST00000516600 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
SCARNA21.2-201ENST00000516600 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
SCARNA21.2-201ENST00000516600 NEURL4Q96JN8 1562 aa10.13□□□□□ -0.79
SCARNA21.2-201ENST00000516600 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
SCARNA21.2-201ENST00000516600 KDM5CP41229 1560 aa10.11□□□□□ -0.79
SCARNA21.2-201ENST00000516600 ZNF772Q68DY9 489 aaPredicted RBP10.11□□□□□ -0.79
SCARNA21.2-201ENST00000516600 ABCA6Q8N139 1617 aa10.11□□□□□ -0.79
SCARNA21.2-201ENST00000516600 SYNMO15061 1565 aa10.1□□□□□ -0.79
SCARNA21.2-201ENST00000516600 PLCH2O75038 1416 aa10.1□□□□□ -0.79
SCARNA21.2-201ENST00000516600 AFAP1Q8N556 730 aa10.1□□□□□ -0.79
SCARNA21.2-201ENST00000516600 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
SCARNA21.2-201ENST00000516600 SETBP1Q9Y6X0 1596 aa10.09□□□□□ -0.79
SCARNA21.2-201ENST00000516600 EFCAB2Q5VUJ9 269 aa10.09□□□□□ -0.79
SCARNA21.2-201ENST00000516600 A2ML1A8K2U0 1454 aa10.09□□□□□ -0.79
SCARNA21.2-201ENST00000516600 DNMT1P26358 1616 aaKnown RBP10.08□□□□□ -0.8
SCARNA21.2-201ENST00000516600 RXRBP28702 533 aa10.08□□□□□ -0.8
SCARNA21.2-201ENST00000516600 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
SCARNA21.2-201ENST00000516600 ANKLE2Q86XL3 938 aa10.07□□□□□ -0.8
SCARNA21.2-201ENST00000516600 CDK12Q9NYV4 1490 aaPredicted RBP10.06□□□□□ -0.8
SCARNA21.2-201ENST00000516600 MEX3CQ5U5Q3 659 aaKnown RBP10.06□□□□□ -0.8
SCARNA21.2-201ENST00000516600 NPHP4O75161 1426 aaPredicted RBP10.06□□□□□ -0.8
SCARNA21.2-201ENST00000516600 MLH3Q9UHC1 1453 aa10.05□□□□□ -0.8
SCARNA21.2-201ENST00000516600 CLTCQ00610 1675 aaKnown RBP10.05□□□□□ -0.8
SCARNA21.2-201ENST00000516600 STRCP1A6NGW2 1772 aa10.04□□□□□ -0.8
SCARNA21.2-201ENST00000516600 CDK13Q14004 1512 aaKnown RBP10.04□□□□□ -0.8
SCARNA21.2-201ENST00000516600 JCADQ9P266 1359 aa10.03□□□□□ -0.8
SCARNA21.2-201ENST00000516600 MYO5CQ9NQX4 1742 aa10.03□□□□□ -0.8
SCARNA21.2-201ENST00000516600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.02□□□□□ -0.8
SCARNA21.2-201ENST00000516600 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
SCARNA21.2-201ENST00000516600 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
SCARNA21.2-201ENST00000516600 NUTM2DQ5VT03 806 aaPredicted RBP10.01□□□□□ -0.81
SCARNA21.2-201ENST00000516600 NUTM2AQ8IVF1 878 aaPredicted RBP10.01□□□□□ -0.81
SCARNA21.2-201ENST00000516600 MED14O60244 1454 aa10.01□□□□□ -0.81
SCARNA21.2-201ENST00000516600 IQGAP1P46940 1657 aa10.01□□□□□ -0.81
SCARNA21.2-201ENST00000516600 ROBO1Q9Y6N7 1651 aa10.01□□□□□ -0.81
SCARNA21.2-201ENST00000516600 DEPDC5O75140 1603 aa10□□□□□ -0.81
SCARNA21.2-201ENST00000516600 ABCC1P33527 1531 aa9.99□□□□□ -0.81
SCARNA21.2-201ENST00000516600 ARHGAP5Q13017 1502 aa9.99□□□□□ -0.81
SCARNA21.2-201ENST00000516600 LRP6O75581 1613 aa9.98□□□□□ -0.81
SCARNA21.2-201ENST00000516600 THEMISQ8N1K5 641 aaPredicted RBP9.98□□□□□ -0.81
SCARNA21.2-201ENST00000516600 ITSN2Q9NZM3 1697 aa9.98□□□□□ -0.81
SCARNA21.2-201ENST00000516600 SAMD9Q5K651 1589 aa9.97□□□□□ -0.81
SCARNA21.2-201ENST00000516600 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms