RNA–Protein interactions for RNA: ENST00000515393.5

MCTP1-218, Transcript of multiple C2 and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCTP1, Length 5,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTP1-218ENST00000515393 PDE3BQ13370 1112 aa23.93■■□□□ 1.42
MCTP1-218ENST00000515393 PHLDB1Q86UU1 1377 aa23.92■■□□□ 1.42
MCTP1-218ENST00000515393 NEUROD2Q15784 382 aa23.92■■□□□ 1.42
MCTP1-218ENST00000515393 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
MCTP1-218ENST00000515393 CALD1Q05682 793 aaKnown RBP23.91■■□□□ 1.42
MCTP1-218ENST00000515393 IPO8O15397 1037 aaKnown RBP23.91■■□□□ 1.42
MCTP1-218ENST00000515393 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
MCTP1-218ENST00000515393 MCCP23508 829 aa23.9■■□□□ 1.42
MCTP1-218ENST00000515393 PKD2Q13563 968 aa23.9■■□□□ 1.42
MCTP1-218ENST00000515393 WIZO95785 1651 aa23.89■■□□□ 1.42
MCTP1-218ENST00000515393 MORC1Q86VD1 984 aa23.89■■□□□ 1.41
MCTP1-218ENST00000515393 DNTTIP2Q5QJE6 756 aaKnown RBP23.88■■□□□ 1.41
MCTP1-218ENST00000515393 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
MCTP1-218ENST00000515393 NRDCO43847 1150 aa23.88■■□□□ 1.41
MCTP1-218ENST00000515393 RCAN3Q9UKA8 241 aa23.88■■□□□ 1.41
MCTP1-218ENST00000515393 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
MCTP1-218ENST00000515393 NAP1L5Q96NT1 182 aaPredicted RBP23.85■■□□□ 1.41
MCTP1-218ENST00000515393 U2SURPO15042 1029 aaKnown RBP23.85■■□□□ 1.41
MCTP1-218ENST00000515393 RWDD1Q9H446 243 aaPredicted RBP23.82■■□□□ 1.4
MCTP1-218ENST00000515393 DEKP35659 375 aaKnown RBP23.81■■□□□ 1.4
MCTP1-218ENST00000515393 PMFBP1Q8TBY8 1022 aa23.8■■□□□ 1.4
MCTP1-218ENST00000515393 CHMP4AQ9BY43 222 aa23.8■■□□□ 1.4
MCTP1-218ENST00000515393 ZBTB7CA1YPR0 619 aa23.79■■□□□ 1.4
MCTP1-218ENST00000515393 NUP155O75694 1391 aa23.78■■□□□ 1.4
MCTP1-218ENST00000515393 GBP4Q96PP9 640 aa23.78■■□□□ 1.4
MCTP1-218ENST00000515393 HDGFL2Q7Z4V5 671 aaPredicted RBP23.77■■□□□ 1.4
MCTP1-218ENST00000515393 SMARCA4P51532 1647 aa23.76■■□□□ 1.39
MCTP1-218ENST00000515393 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
MCTP1-218ENST00000515393 CHAF1AQ13111 956 aaPredicted RBP23.75■■□□□ 1.39
MCTP1-218ENST00000515393 NLRP13Q86W25 1043 aa23.75■■□□□ 1.39
MCTP1-218ENST00000515393 OS9Q13438 667 aaPredicted RBP23.75■■□□□ 1.39
MCTP1-218ENST00000515393 KIF15Q9NS87 1388 aa23.74■■□□□ 1.39
MCTP1-218ENST00000515393 MSNP26038 577 aaKnown RBP23.73■■□□□ 1.39
MCTP1-218ENST00000515393 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
MCTP1-218ENST00000515393 EFCAB2Q5VUJ9 269 aa23.72■■□□□ 1.39
MCTP1-218ENST00000515393 SRPK2P78362 688 aaKnown RBP23.71■■□□□ 1.39
MCTP1-218ENST00000515393 TSHZ2Q9NRE2 1034 aa23.71■■□□□ 1.39
MCTP1-218ENST00000515393 IPO9Q96P70 1041 aaKnown RBP23.7■■□□□ 1.39
MCTP1-218ENST00000515393 KCNJ4P48050 445 aa23.69■■□□□ 1.38
MCTP1-218ENST00000515393 GOLGA6L4A6NEF3 574 aa23.69■■□□□ 1.38
MCTP1-218ENST00000515393 FGD1P98174 961 aa23.67■■□□□ 1.38
MCTP1-218ENST00000515393 PLEKHG5O94827 1062 aa23.67■■□□□ 1.38
MCTP1-218ENST00000515393 GOLGA2Q08379 1002 aa23.66■■□□□ 1.38
MCTP1-218ENST00000515393 USP35Q9P2H5 1018 aa23.66■■□□□ 1.38
MCTP1-218ENST00000515393 L3MBTL2Q969R5 705 aa23.65■■□□□ 1.38
MCTP1-218ENST00000515393 ATAD2BQ9ULI0 1458 aa23.65■■□□□ 1.38
MCTP1-218ENST00000515393 MYBBP1AQ9BQG0 1328 aaKnown RBP23.65■■□□□ 1.38
MCTP1-218ENST00000515393 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.38
MCTP1-218ENST00000515393 RTF1Q92541 710 aaKnown RBP23.64■■□□□ 1.38
MCTP1-218ENST00000515393 SYAP1Q96A49 352 aaPredicted RBP23.62■■□□□ 1.37
MCTP1-218ENST00000515393 HDAC5Q9UQL6 1122 aa23.62■■□□□ 1.37
MCTP1-218ENST00000515393 UACAQ9BZF9 1416 aa23.61■■□□□ 1.37
MCTP1-218ENST00000515393 HTATSF1O43719 755 aaKnown RBP23.6■■□□□ 1.37
MCTP1-218ENST00000515393 NGEFQ8N5V2 710 aa23.59■■□□□ 1.37
MCTP1-218ENST00000515393 ZBED9Q6R2W3 1325 aa23.58■■□□□ 1.37
MCTP1-218ENST00000515393 LMOD3Q0VAK6 560 aa23.57■■□□□ 1.36
MCTP1-218ENST00000515393 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
MCTP1-218ENST00000515393 PLCB2Q00722 1185 aa23.57■■□□□ 1.36
MCTP1-218ENST00000515393 TERF2IPQ9NYB0 399 aa23.56■■□□□ 1.36
MCTP1-218ENST00000515393 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
MCTP1-218ENST00000515393 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.36
MCTP1-218ENST00000515393 KIAA1211Q6ZU35 1233 aa23.56■■□□□ 1.36
MCTP1-218ENST00000515393 CUX1P39880 1505 aa23.56■■□□□ 1.36
MCTP1-218ENST00000515393 FOXD1Q16676 465 aa23.56■■□□□ 1.36
MCTP1-218ENST00000515393 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
MCTP1-218ENST00000515393 A0A0G2JS52 829 aa23.54■■□□□ 1.36
MCTP1-218ENST00000515393 HMMRO75330 724 aa23.54■■□□□ 1.36
MCTP1-218ENST00000515393 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
MCTP1-218ENST00000515393 CENPQQ7L2Z9 268 aaPredicted RBP23.53■■□□□ 1.36
MCTP1-218ENST00000515393 RTN4Q9NQC3 1192 aaKnown RBP23.52■■□□□ 1.36
MCTP1-218ENST00000515393 CSPP1Q1MSJ5 1256 aa23.51■■□□□ 1.35
MCTP1-218ENST00000515393 CCDC144AA2RUR9 1427 aa23.5■■□□□ 1.35
MCTP1-218ENST00000515393 KIAA2012Q0VF49 1180 aa23.5■■□□□ 1.35
MCTP1-218ENST00000515393 GOLGA6L3A6NEY3 463 aa23.49■■□□□ 1.35
MCTP1-218ENST00000515393 SPAG9O60271 1321 aaKnown RBP23.48■■□□□ 1.35
MCTP1-218ENST00000515393 FANCIQ9NVI1 1328 aa23.46■■□□□ 1.35
MCTP1-218ENST00000515393 PRKRIP1Q9H875 184 aaPredicted RBP23.46■■□□□ 1.35
MCTP1-218ENST00000515393 SMC4Q9NTJ3 1288 aa23.46■■□□□ 1.35
MCTP1-218ENST00000515393 STAC3Q96MF2 364 aa23.45■■□□□ 1.34
MCTP1-218ENST00000515393 GPATCH3Q96I76 525 aa23.44■■□□□ 1.34
MCTP1-218ENST00000515393 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
MCTP1-218ENST00000515393 DDX11L8A8MPP1 907 aa23.43■■□□□ 1.34
MCTP1-218ENST00000515393 GGT6Q6P531 493 aa23.43■■□□□ 1.34
MCTP1-218ENST00000515393 DRC7Q8IY82 874 aa23.43■■□□□ 1.34
MCTP1-218ENST00000515393 E9PSI1 815 aa23.42■■□□□ 1.34
MCTP1-218ENST00000515393 TPRNQ4KMQ1 711 aa23.41■■□□□ 1.34
MCTP1-218ENST00000515393 KIF21BO75037 1637 aa23.41■■□□□ 1.34
MCTP1-218ENST00000515393 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
MCTP1-218ENST00000515393 FAM161AQ3B820 660 aa23.41■■□□□ 1.34
MCTP1-218ENST00000515393 LMOD2Q6P5Q4 547 aa23.4■■□□□ 1.34
MCTP1-218ENST00000515393 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
MCTP1-218ENST00000515393 MYOM3Q5VTT5 1437 aa23.4■■□□□ 1.34
MCTP1-218ENST00000515393 PHF14O94880 888 aa23.4■■□□□ 1.34
MCTP1-218ENST00000515393 USP47Q96K76 1375 aa23.39■■□□□ 1.34
MCTP1-218ENST00000515393 RRP1P56182 461 aaKnown RBP23.39■■□□□ 1.33
MCTP1-218ENST00000515393 AAMPQ13685 434 aa23.39■■□□□ 1.33
MCTP1-218ENST00000515393 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
MCTP1-218ENST00000515393 TPM4P67936 248 aa23.37■■□□□ 1.33
MCTP1-218ENST00000515393 SPRYD3Q8NCJ5 442 aa23.37■■□□□ 1.33
MCTP1-218ENST00000515393 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms