RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 ABCC10Q5T3U5 1492 aa8.85□□□□□ -0.99
COPB2-213ENST00000515006 PLCH2O75038 1416 aa8.85□□□□□ -0.99
COPB2-213ENST00000515006 ASXL2Q76L83 1435 aa8.85□□□□□ -0.99
COPB2-213ENST00000515006 PLEKHH2Q8IVE3 1493 aa8.84□□□□□ -0.99
COPB2-213ENST00000515006 ADCY10Q96PN6 1610 aa8.84□□□□□ -0.99
COPB2-213ENST00000515006 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
COPB2-213ENST00000515006 NCBP3Q53F19 620 aaKnown RBP8.83□□□□□ -1
COPB2-213ENST00000515006 CCER1Q8TC90 406 aaPredicted RBP8.83□□□□□ -1
COPB2-213ENST00000515006 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
COPB2-213ENST00000515006 SETD5Q9C0A6 1442 aa8.82□□□□□ -1
COPB2-213ENST00000515006 KIAA1107Q9UPP5 1409 aa8.82□□□□□ -1
COPB2-213ENST00000515006 ROCK1Q13464 1354 aa8.82□□□□□ -1
COPB2-213ENST00000515006 CLSPNQ9HAW4 1339 aa8.81□□□□□ -1
COPB2-213ENST00000515006 RIMBP3CA6NJZ7 1639 aa8.81□□□□□ -1
COPB2-213ENST00000515006 RIMBP3BA6NNM3 1639 aa8.81□□□□□ -1
COPB2-213ENST00000515006 PTPN23Q9H3S7 1636 aa8.81□□□□□ -1
COPB2-213ENST00000515006 RIMBP3Q9UFD9 1639 aa8.81□□□□□ -1
COPB2-213ENST00000515006 ZNF644Q9H582 1327 aaPredicted RBP8.8□□□□□ -1
COPB2-213ENST00000515006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.8□□□□□ -1
COPB2-213ENST00000515006 ARAP3Q8WWN8 1544 aa8.8□□□□□ -1
COPB2-213ENST00000515006 ANKRD30AQ9BXX3 1397 aa8.8□□□□□ -1
COPB2-213ENST00000515006 ITSN2Q9NZM3 1697 aa8.8□□□□□ -1
COPB2-213ENST00000515006 MAPKBP1O60336 1514 aa8.8□□□□□ -1
COPB2-213ENST00000515006 CD109Q6YHK3 1445 aa8.8□□□□□ -1
COPB2-213ENST00000515006 AKNAQ7Z591 1439 aa8.8□□□□□ -1
COPB2-213ENST00000515006 HNRNPMP52272 730 aaKnown RBP eCLIP8.79□□□□□ -1
COPB2-213ENST00000515006 DNAJC5Q9H3Z4 198 aa8.79□□□□□ -1
COPB2-213ENST00000515006 ARHGAP5Q13017 1502 aa8.79□□□□□ -1
COPB2-213ENST00000515006 HFM1A2PYH4 1435 aa8.79□□□□□ -1
COPB2-213ENST00000515006 ABCC5O15440 1437 aa8.79□□□□□ -1
COPB2-213ENST00000515006 DAPK1P53355 1430 aa8.79□□□□□ -1
COPB2-213ENST00000515006 CAMSAP2Q08AD1 1489 aa8.78□□□□□ -1
COPB2-213ENST00000515006 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
COPB2-213ENST00000515006 FAM69CQ0P6D2 419 aa8.77□□□□□ -1.01
COPB2-213ENST00000515006 RAB3GAP2Q9H2M9 1393 aa8.76□□□□□ -1.01
COPB2-213ENST00000515006 RRP7BPQ9NSQ0 103 aa8.76□□□□□ -1.01
COPB2-213ENST00000515006 FANCAO15360 1455 aa8.76□□□□□ -1.01
COPB2-213ENST00000515006 CCDC141Q6ZP82 1450 aa8.76□□□□□ -1.01
COPB2-213ENST00000515006 NCOA1Q15788 1441 aa8.75□□□□□ -1.01
COPB2-213ENST00000515006 ABCA9Q8IUA7 1624 aa8.75□□□□□ -1.01
COPB2-213ENST00000515006 MBD5Q9P267 1494 aa8.75□□□□□ -1.01
COPB2-213ENST00000515006 SHANK2Q9UPX8 1470 aa8.75□□□□□ -1.01
COPB2-213ENST00000515006 NAIPQ13075 1403 aa8.74□□□□□ -1.01
COPB2-213ENST00000515006 PTPRKQ15262 1439 aa8.74□□□□□ -1.01
COPB2-213ENST00000515006 NEO1Q92859 1461 aa8.74□□□□□ -1.01
COPB2-213ENST00000515006 SPAG9O60271 1321 aaKnown RBP8.74□□□□□ -1.01
COPB2-213ENST00000515006 ARHGEF5Q12774 1597 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 DNMT1P26358 1616 aaKnown RBP8.73□□□□□ -1.01
COPB2-213ENST00000515006 PREX2Q70Z35 1606 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 RTEL1-TNFRSF6BF6WH68 1400 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 C9orf84Q5VXU9 1444 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 ADGRL2O95490 1459 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 TRIM52Q96A61 297 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 MYT1LQ9UL68 1186 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 GLI2P10070 1586 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 TTC37Q6PGP7 1564 aa8.73□□□□□ -1.01
COPB2-213ENST00000515006 SCAPERQ9BY12 1400 aa8.72□□□□□ -1.01
COPB2-213ENST00000515006 TIMELESSQ9UNS1 1208 aa8.72□□□□□ -1.01
COPB2-213ENST00000515006 CDC42BPAQ5VT25 1732 aa8.71□□□□□ -1.01
COPB2-213ENST00000515006 MYO5CQ9NQX4 1742 aa8.71□□□□□ -1.01
COPB2-213ENST00000515006 ADGRL1O94910 1474 aa8.71□□□□□ -1.01
COPB2-213ENST00000515006 TEX14Q8IWB6 1497 aa8.71□□□□□ -1.01
COPB2-213ENST00000515006 PPP4R3CPQ6ZMV5 832 aa8.7□□□□□ -1.02
COPB2-213ENST00000515006 AFAP1Q8N556 730 aa8.7□□□□□ -1.02
COPB2-213ENST00000515006 KIF15Q9NS87 1388 aa8.7□□□□□ -1.02
COPB2-213ENST00000515006 ANKRD50Q9ULJ7 1429 aa8.7□□□□□ -1.02
COPB2-213ENST00000515006 SAMD9LQ8IVG5 1584 aa8.69□□□□□ -1.02
COPB2-213ENST00000515006 CFAP74Q9C0B2 1584 aa8.69□□□□□ -1.02
COPB2-213ENST00000515006 PPP6R1Q9UPN7 881 aa8.69□□□□□ -1.02
COPB2-213ENST00000515006 DHX57Q6P158 1386 aaKnown RBP8.69□□□□□ -1.02
COPB2-213ENST00000515006 ZNF518AQ6AHZ1 1483 aa8.69□□□□□ -1.02
COPB2-213ENST00000515006 DENND4BO75064 1496 aaPredicted RBP8.68□□□□□ -1.02
COPB2-213ENST00000515006 ABCC1P33527 1531 aa8.68□□□□□ -1.02
COPB2-213ENST00000515006 SYCP2Q9BX26 1530 aa8.68□□□□□ -1.02
COPB2-213ENST00000515006 CDC42BPBQ9Y5S2 1711 aa8.68□□□□□ -1.02
COPB2-213ENST00000515006 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
COPB2-213ENST00000515006 MAST1Q9Y2H9 1570 aa8.67□□□□□ -1.02
COPB2-213ENST00000515006 TRAPPC8Q9Y2L5 1435 aa8.67□□□□□ -1.02
COPB2-213ENST00000515006 DUOX2Q9NRD8 1548 aa8.65□□□□□ -1.02
COPB2-213ENST00000515006 ARHGEF12Q9NZN5 1544 aa8.65□□□□□ -1.02
COPB2-213ENST00000515006 MLH3Q9UHC1 1453 aa8.65□□□□□ -1.02
COPB2-213ENST00000515006 ERBINQ96RT1 1412 aa8.65□□□□□ -1.02
COPB2-213ENST00000515006 NUP155O75694 1391 aa8.65□□□□□ -1.02
COPB2-213ENST00000515006 DHX29Q7Z478 1369 aaKnown RBP8.65□□□□□ -1.02
COPB2-213ENST00000515006 TRHP20396 242 aaPredicted RBP8.65□□□□□ -1.02
COPB2-213ENST00000515006 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
COPB2-213ENST00000515006 KANK1Q14678 1352 aa8.64□□□□□ -1.03
COPB2-213ENST00000515006 DIP2BQ9P265 1576 aa8.64□□□□□ -1.03
COPB2-213ENST00000515006 MAGI2Q86UL8 1455 aa8.64□□□□□ -1.03
COPB2-213ENST00000515006 MAP3K4Q9Y6R4 1608 aa8.63□□□□□ -1.03
COPB2-213ENST00000515006 RAPGEF3O95398 923 aa8.63□□□□□ -1.03
COPB2-213ENST00000515006 FOXD1Q16676 465 aa8.62□□□□□ -1.03
COPB2-213ENST00000515006 ADGBQ8N7X0 1667 aa8.62□□□□□ -1.03
COPB2-213ENST00000515006 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
COPB2-213ENST00000515006 KIF3BO15066 747 aa8.61□□□□□ -1.03
COPB2-213ENST00000515006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.61□□□□□ -1.032e-9■□□□□ 8.5
COPB2-213ENST00000515006 GCC2Q8IWJ2 1684 aa8.61□□□□□ -1.03
COPB2-213ENST00000515006 ATP7AQ04656 1500 aa8.6□□□□□ -1.03
COPB2-213ENST00000515006 CROCC2H7BZ55 1655 aa8.6□□□□□ -1.03
COPB2-213ENST00000515006 PKD2Q13563 968 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms