RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 ARHGAP35Q9NRY4 1499 aa38.03■■■■□ 3.68
SMAD1-214ENST00000514831 FER1L4A9Z1Z3 1794 aa38.03■■■■□ 3.68
SMAD1-214ENST00000514831 KIF14Q15058 1648 aa37.98■■■■□ 3.67
SMAD1-214ENST00000514831 UBTFP17480 764 aaKnown RBP37.97■■■■□ 3.67
SMAD1-214ENST00000514831 C9orf84Q5VXU9 1444 aa37.91■■■■□ 3.66
SMAD1-214ENST00000514831 ARHGEF12Q9NZN5 1544 aa37.91■■■■□ 3.66
SMAD1-214ENST00000514831 ATP10AO60312 1499 aa37.9■■■■□ 3.66
SMAD1-214ENST00000514831 LRRIQ1Q96JM4 1722 aa37.9■■■■□ 3.66
SMAD1-214ENST00000514831 CDK11AQ9UQ88 783 aaPredicted RBP37.9■■■■□ 3.66
SMAD1-214ENST00000514831 TROQ12816 1431 aaPredicted RBP37.89■■■■□ 3.66
SMAD1-214ENST00000514831 EFCAB2Q5VUJ9 269 aa37.89■■■■□ 3.66
SMAD1-214ENST00000514831 ATP1B4Q9UN42 357 aaPredicted RBP37.89■■■■□ 3.66
SMAD1-214ENST00000514831 EHMT2Q96KQ7 1210 aa37.87■■■■□ 3.65
SMAD1-214ENST00000514831 ZNF518AQ6AHZ1 1483 aa37.87■■■■□ 3.65
SMAD1-214ENST00000514831 KDM5CP41229 1560 aa37.86■■■■□ 3.65
SMAD1-214ENST00000514831 ARHGAP5Q13017 1502 aa37.84■■■■□ 3.65
SMAD1-214ENST00000514831 HSPA2P54652 639 aa37.84■■■■□ 3.65
SMAD1-214ENST00000514831 MLECQ14165 292 aa37.84■■■■□ 3.65
SMAD1-214ENST00000514831 PLPPR3Q6T4P5 718 aa37.83■■■■□ 3.65
SMAD1-214ENST00000514831 CLIP1P30622 1438 aa37.83■■■■□ 3.65
SMAD1-214ENST00000514831 PREX1Q8TCU6 1659 aa37.79■■■■□ 3.64
SMAD1-214ENST00000514831 CDC42BPBQ9Y5S2 1711 aa37.76■■■■□ 3.64
SMAD1-214ENST00000514831 REREQ9P2R6 1566 aa37.73■■■■□ 3.63
SMAD1-214ENST00000514831 DIP2CQ9Y2E4 1556 aa37.73■■■■□ 3.63
SMAD1-214ENST00000514831 PREX2Q70Z35 1606 aa37.72■■■■□ 3.63
SMAD1-214ENST00000514831 CHIC1Q5VXU3 224 aa37.72■■■■□ 3.63
SMAD1-214ENST00000514831 CCDC18Q5T9S5 1454 aa37.68■■■■□ 3.62
SMAD1-214ENST00000514831 ABCA6Q8N139 1617 aa37.67■■■■□ 3.62
SMAD1-214ENST00000514831 AFAP1Q8N556 730 aa37.66■■■■□ 3.62
SMAD1-214ENST00000514831 ABCC1P33527 1531 aa37.66■■■■□ 3.62
SMAD1-214ENST00000514831 MLH3Q9UHC1 1453 aa37.64■■■■□ 3.62
SMAD1-214ENST00000514831 CASKIN1Q8WXD9 1431 aa37.64■■■■□ 3.62
SMAD1-214ENST00000514831 ITSN2Q9NZM3 1697 aa37.63■■■■□ 3.62
SMAD1-214ENST00000514831 CDC42BPAQ5VT25 1732 aa37.57■■■■□ 3.6
SMAD1-214ENST00000514831 AGLP35573 1532 aa37.56■■■■□ 3.6
SMAD1-214ENST00000514831 CEBPAP49715 358 aaPredicted RBP37.56■■■■□ 3.6
SMAD1-214ENST00000514831 SETD1BQ9UPS6 1966 aaKnown RBP37.55■■■■□ 3.6
SMAD1-214ENST00000514831 TRAPPC8Q9Y2L5 1435 aa37.54■■■■□ 3.6
SMAD1-214ENST00000514831 MYT1LQ9UL68 1186 aa37.54■■■■□ 3.6
SMAD1-214ENST00000514831 STRCQ7RTU9 1775 aa37.53■■■■□ 3.6
SMAD1-214ENST00000514831 CERKQ8TCT0 537 aa37.53■■■■□ 3.6
SMAD1-214ENST00000514831 C3P01024 1663 aa37.53■■■■□ 3.6
SMAD1-214ENST00000514831 UHRF1BP1Q6BDS2 1440 aa37.53■■■■□ 3.6
SMAD1-214ENST00000514831 FYCO1Q9BQS8 1478 aa37.52■■■■□ 3.6
SMAD1-214ENST00000514831 KIDINS220Q9ULH0 1771 aa37.51■■■■□ 3.6
SMAD1-214ENST00000514831 SAMD9LQ8IVG5 1584 aa37.41■■■■□ 3.58
SMAD1-214ENST00000514831 DMRT2Q9Y5R5 561 aa37.38■■■■□ 3.57
SMAD1-214ENST00000514831 SYCP2Q9BX26 1530 aa37.36■■■■□ 3.57
SMAD1-214ENST00000514831 CNTLNQ9NXG0 1405 aa37.36■■■■□ 3.57
SMAD1-214ENST00000514831 ESF1Q9H501 851 aaKnown RBP37.33■■■■□ 3.57
SMAD1-214ENST00000514831 MROH2AA6NES4 1674 aa37.33■■■■□ 3.57
SMAD1-214ENST00000514831 GPATCH8Q9UKJ3 1502 aaKnown RBP37.32■■■■□ 3.57
SMAD1-214ENST00000514831 PTPRTO14522 1441 aa37.29■■■■□ 3.56
SMAD1-214ENST00000514831 INO80Q9ULG1 1556 aaPredicted RBP37.25■■■■□ 3.55
SMAD1-214ENST00000514831 ATP7AQ04656 1500 aa37.25■■■■□ 3.55
SMAD1-214ENST00000514831 SUPT6HQ7KZ85 1726 aaKnown RBP37.23■■■■□ 3.55
SMAD1-214ENST00000514831 ZNF777Q9ULD5 760 aaPredicted RBP37.23■■■■□ 3.55
SMAD1-214ENST00000514831 PLXNC1O60486 1568 aa37.22■■■■□ 3.55
SMAD1-214ENST00000514831 PLEKHH2Q8IVE3 1493 aa37.22■■■■□ 3.55
SMAD1-214ENST00000514831 NPATQ14207 1427 aa37.21■■■■□ 3.55
SMAD1-214ENST00000514831 KIAA1107Q9UPP5 1409 aa37.21■■■■□ 3.55
SMAD1-214ENST00000514831 SPAG9O60271 1321 aaKnown RBP37.21■■■■□ 3.55
SMAD1-214ENST00000514831 NCOA1Q15788 1441 aa37.19■■■■□ 3.54
SMAD1-214ENST00000514831 HNRNPMP52272 730 aaKnown RBP eCLIP37.15■■■■□ 3.54
SMAD1-214ENST00000514831 CLTCQ00610 1675 aaKnown RBP37.13■■■■□ 3.53
SMAD1-214ENST00000514831 LTBP4Q8N2S1 1624 aa37.13■■■■□ 3.53
SMAD1-214ENST00000514831 CCNB3Q8WWL7 1395 aa37.13■■■■□ 3.53
SMAD1-214ENST00000514831 A2MP01023 1474 aa37.12■■■■□ 3.53
SMAD1-214ENST00000514831 CFDP1Q9UEE9 299 aaPredicted RBP37.11■■■■□ 3.53
SMAD1-214ENST00000514831 CAMSAP1Q5T5Y3 1602 aa37.1■■■■□ 3.53
SMAD1-214ENST00000514831 ZNF142P52746 1687 aaPredicted RBP37.1■■■■□ 3.53
SMAD1-214ENST00000514831 ZMYM3Q14202 1370 aa37.1■■■■□ 3.53
SMAD1-214ENST00000514831 MTUS2Q5JR59 1369 aa37.09■■■■□ 3.53
SMAD1-214ENST00000514831 ADGBQ8N7X0 1667 aa37.09■■■■□ 3.53
SMAD1-214ENST00000514831 MYO3AQ8NEV4 1616 aa37.07■■■■□ 3.53
SMAD1-214ENST00000514831 TIAM1Q13009 1591 aa37.07■■■■□ 3.52
SMAD1-214ENST00000514831 IQSEC2Q5JU85 1478 aa37.06■■■■□ 3.52
SMAD1-214ENST00000514831 EHBP1L1Q8N3D4 1523 aa37.05■■■■□ 3.52
SMAD1-214ENST00000514831 CEP170BQ9Y4F5 1589 aaPredicted RBP36.99■■■■□ 3.51
SMAD1-214ENST00000514831 PTPRKQ15262 1439 aa36.97■■■■□ 3.51
SMAD1-214ENST00000514831 PLA2R1Q13018 1463 aa36.96■■■■□ 3.51
SMAD1-214ENST00000514831 MBD5Q9P267 1494 aa36.96■■■■□ 3.51
SMAD1-214ENST00000514831 CEP162Q5TB80 1403 aa36.93■■■■□ 3.5
SMAD1-214ENST00000514831 GGT6Q6P531 493 aa36.9■■■■□ 3.5
SMAD1-214ENST00000514831 PPP6R1Q9UPN7 881 aa36.9■■■■□ 3.5
SMAD1-214ENST00000514831 RTEL1-TNFRSF6BF6WH68 1400 aa36.9■■■■□ 3.5
SMAD1-214ENST00000514831 ZNF644Q9H582 1327 aaPredicted RBP36.89■■■■□ 3.5
SMAD1-214ENST00000514831 DISP3Q9P2K9 1392 aa36.89■■■■□ 3.5
SMAD1-214ENST00000514831 TCOF1Q13428 1488 aaKnown RBP36.88■■■■□ 3.5
SMAD1-214ENST00000514831 NCKAP5LQ9HCH0 1330 aa36.85■■■■□ 3.49
SMAD1-214ENST00000514831 SPATA31D1Q6ZQQ2 1576 aa36.84■■■■□ 3.49
SMAD1-214ENST00000514831 PKD2Q13563 968 aa36.84■■■■□ 3.49
SMAD1-214ENST00000514831 FAM135AQ9P2D6 1515 aa36.8■■■■□ 3.48
SMAD1-214ENST00000514831 DHX29Q7Z478 1369 aaKnown RBP36.79■■■■□ 3.48
SMAD1-214ENST00000514831 A2ML1A8K2U0 1454 aa36.79■■■■□ 3.48
SMAD1-214ENST00000514831 CCDC141Q6ZP82 1450 aa36.79■■■■□ 3.48
SMAD1-214ENST00000514831 ZNF335Q9H4Z2 1342 aaPredicted RBP36.79■■■■□ 3.48
SMAD1-214ENST00000514831 DNMT1P26358 1616 aaKnown RBP36.77■■■■□ 3.48
SMAD1-214ENST00000514831 CAMSAP2Q08AD1 1489 aa36.76■■■■□ 3.48
SMAD1-214ENST00000514831 NCOA2Q15596 1464 aa36.75■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms