RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
NEDD9-214ENST00000513989 DENND4BO75064 1496 aaPredicted RBP15.81■□□□□ 0.12
NEDD9-214ENST00000513989 KIF14Q15058 1648 aa15.81■□□□□ 0.12
NEDD9-214ENST00000513989 FYCO1Q9BQS8 1478 aa15.81■□□□□ 0.12
NEDD9-214ENST00000513989 RIMS1Q86UR5 1692 aaKnown RBP15.79■□□□□ 0.12
NEDD9-214ENST00000513989 CCDC18Q5T9S5 1454 aa15.77■□□□□ 0.11
NEDD9-214ENST00000513989 ILDR1Q86SU0 546 aaPredicted RBP15.76■□□□□ 0.11
NEDD9-214ENST00000513989 PLCH2O75038 1416 aa15.76■□□□□ 0.11
NEDD9-214ENST00000513989 YEATS2Q9ULM3 1422 aa15.76■□□□□ 0.11
NEDD9-214ENST00000513989 ZFYVE16Q7Z3T8 1539 aa15.75■□□□□ 0.11
NEDD9-214ENST00000513989 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
NEDD9-214ENST00000513989 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
NEDD9-214ENST00000513989 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
NEDD9-214ENST00000513989 FER1L4A9Z1Z3 1794 aa15.72■□□□□ 0.11
NEDD9-214ENST00000513989 PCF11O94913 1555 aaKnown RBP15.72■□□□□ 0.11
NEDD9-214ENST00000513989 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
NEDD9-214ENST00000513989 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.1
NEDD9-214ENST00000513989 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.1
NEDD9-214ENST00000513989 SCAPERQ9BY12 1400 aa15.7■□□□□ 0.1
NEDD9-214ENST00000513989 TROQ12816 1431 aaPredicted RBP15.69■□□□□ 0.1
NEDD9-214ENST00000513989 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
NEDD9-214ENST00000513989 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
NEDD9-214ENST00000513989 KDM5CP41229 1560 aa15.68■□□□□ 0.1
NEDD9-214ENST00000513989 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
NEDD9-214ENST00000513989 KANK4Q5T7N3 995 aaPredicted RBP15.67■□□□□ 0.1
NEDD9-214ENST00000513989 CDC42BPAQ5VT25 1732 aa15.67■□□□□ 0.1
NEDD9-214ENST00000513989 ARHGAP5Q13017 1502 aa15.64■□□□□ 0.09
NEDD9-214ENST00000513989 ARHGEF12Q9NZN5 1544 aa15.64■□□□□ 0.09
NEDD9-214ENST00000513989 ITSN2Q9NZM3 1697 aa15.64■□□□□ 0.09
NEDD9-214ENST00000513989 PPARGC1BQ86YN6 1023 aaKnown RBP15.64■□□□□ 0.09
NEDD9-214ENST00000513989 DIP2CQ9Y2E4 1556 aa15.63■□□□□ 0.09
NEDD9-214ENST00000513989 ABCA6Q8N139 1617 aa15.63■□□□□ 0.09
NEDD9-214ENST00000513989 ATP10AO60312 1499 aa15.63■□□□□ 0.09
NEDD9-214ENST00000513989 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
NEDD9-214ENST00000513989 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
NEDD9-214ENST00000513989 C9orf84Q5VXU9 1444 aa15.61■□□□□ 0.09
NEDD9-214ENST00000513989 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
NEDD9-214ENST00000513989 ABCC1P33527 1531 aa15.61■□□□□ 0.09
NEDD9-214ENST00000513989 TIAM1Q13009 1591 aa15.6■□□□□ 0.09
NEDD9-214ENST00000513989 REREQ9P2R6 1566 aa15.59■□□□□ 0.09
NEDD9-214ENST00000513989 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
NEDD9-214ENST00000513989 PREX1Q8TCU6 1659 aa15.57■□□□□ 0.08
NEDD9-214ENST00000513989 AFAP1Q8N556 730 aa15.57■□□□□ 0.08
NEDD9-214ENST00000513989 MLECQ14165 292 aa15.56■□□□□ 0.08
NEDD9-214ENST00000513989 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
NEDD9-214ENST00000513989 TRAPPC8Q9Y2L5 1435 aa15.56■□□□□ 0.08
NEDD9-214ENST00000513989 SAMD9LQ8IVG5 1584 aa15.55■□□□□ 0.08
NEDD9-214ENST00000513989 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
NEDD9-214ENST00000513989 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
NEDD9-214ENST00000513989 SETD1BQ9UPS6 1966 aaKnown RBP15.55■□□□□ 0.08
NEDD9-214ENST00000513989 C3P01024 1663 aa15.54■□□□□ 0.08
NEDD9-214ENST00000513989 HSPA2P54652 639 aa15.54■□□□□ 0.08
NEDD9-214ENST00000513989 CFDP1Q9UEE9 299 aaPredicted RBP15.54■□□□□ 0.08
NEDD9-214ENST00000513989 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
NEDD9-214ENST00000513989 STRCQ7RTU9 1775 aa15.53■□□□□ 0.08
NEDD9-214ENST00000513989 AGLP35573 1532 aa15.51■□□□□ 0.07
NEDD9-214ENST00000513989 NCOA2Q15596 1464 aa15.51■□□□□ 0.07
NEDD9-214ENST00000513989 GPATCH8Q9UKJ3 1502 aaKnown RBP15.5■□□□□ 0.07
NEDD9-214ENST00000513989 SYCP2Q9BX26 1530 aa15.49■□□□□ 0.07
NEDD9-214ENST00000513989 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
NEDD9-214ENST00000513989 CEBPAP49715 358 aaPredicted RBP15.48■□□□□ 0.07
NEDD9-214ENST00000513989 FBXO41Q8TF61 875 aa15.48■□□□□ 0.07
NEDD9-214ENST00000513989 INO80Q9ULG1 1556 aaPredicted RBP15.47■□□□□ 0.07
NEDD9-214ENST00000513989 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
NEDD9-214ENST00000513989 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
NEDD9-214ENST00000513989 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
NEDD9-214ENST00000513989 RSPH4AQ5TD94 716 aa15.44■□□□□ 0.06
NEDD9-214ENST00000513989 PLXNC1O60486 1568 aa15.44■□□□□ 0.06
NEDD9-214ENST00000513989 MROH2AA6NES4 1674 aa15.44■□□□□ 0.06
NEDD9-214ENST00000513989 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
NEDD9-214ENST00000513989 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
NEDD9-214ENST00000513989 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
NEDD9-214ENST00000513989 CLTCQ00610 1675 aaKnown RBP15.4■□□□□ 0.06
NEDD9-214ENST00000513989 KIAA1107Q9UPP5 1409 aa15.4■□□□□ 0.06
NEDD9-214ENST00000513989 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
NEDD9-214ENST00000513989 ADGBQ8N7X0 1667 aa15.38■□□□□ 0.05
NEDD9-214ENST00000513989 FGD6Q6ZV73 1430 aa15.38■□□□□ 0.05
NEDD9-214ENST00000513989 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
NEDD9-214ENST00000513989 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
NEDD9-214ENST00000513989 HNRNPMP52272 730 aaKnown RBP eCLIP15.38■□□□□ 0.05
NEDD9-214ENST00000513989 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
NEDD9-214ENST00000513989 PLEKHH2Q8IVE3 1493 aa15.37■□□□□ 0.05
NEDD9-214ENST00000513989 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
NEDD9-214ENST00000513989 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
NEDD9-214ENST00000513989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
NEDD9-214ENST00000513989 SPAG9O60271 1321 aaKnown RBP15.35■□□□□ 0.05
NEDD9-214ENST00000513989 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
NEDD9-214ENST00000513989 ZNF142P52746 1687 aaPredicted RBP15.34■□□□□ 0.05
NEDD9-214ENST00000513989 A2MP01023 1474 aa15.33■□□□□ 0.05
NEDD9-214ENST00000513989 MYO3AQ8NEV4 1616 aa15.33■□□□□ 0.04
NEDD9-214ENST00000513989 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
NEDD9-214ENST00000513989 ITGAEP38570 1179 aa15.32■□□□□ 0.04
NEDD9-214ENST00000513989 CERKQ8TCT0 537 aa15.32■□□□□ 0.04
NEDD9-214ENST00000513989 NPATQ14207 1427 aa15.31■□□□□ 0.04
NEDD9-214ENST00000513989 NCOA1Q15788 1441 aa15.3■□□□□ 0.04
NEDD9-214ENST00000513989 CAMSAP1Q5T5Y3 1602 aa15.29■□□□□ 0.04
NEDD9-214ENST00000513989 LTBP4Q8N2S1 1624 aa15.29■□□□□ 0.04
NEDD9-214ENST00000513989 ZMYM3Q14202 1370 aa15.29■□□□□ 0.04
NEDD9-214ENST00000513989 TCOF1Q13428 1488 aaKnown RBP15.28■□□□□ 0.04
NEDD9-214ENST00000513989 PTPRTO14522 1441 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms