RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CFDP1Q9UEE9 299 aaPredicted RBP19.11■□□□□ 0.65
PVT1-203ENST00000513868 DAPK1P53355 1430 aa19.11■□□□□ 0.65
PVT1-203ENST00000513868 NAIPQ13075 1403 aa19.1■□□□□ 0.65
PVT1-203ENST00000513868 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
PVT1-203ENST00000513868 ABCC5O15440 1437 aa19.1■□□□□ 0.65
PVT1-203ENST00000513868 MYO5CQ9NQX4 1742 aa19.1■□□□□ 0.65
PVT1-203ENST00000513868 AKNAQ7Z591 1439 aa19.08■□□□□ 0.65
PVT1-203ENST00000513868 CLSPNQ9HAW4 1339 aa19.07■□□□□ 0.64
PVT1-203ENST00000513868 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
PVT1-203ENST00000513868 SAMD9LQ8IVG5 1584 aa19.05■□□□□ 0.64
PVT1-203ENST00000513868 CHIC2Q9UKJ5 165 aa19.04■□□□□ 0.64
PVT1-203ENST00000513868 MAPKBP1O60336 1514 aa19.03■□□□□ 0.64
PVT1-203ENST00000513868 KDM6BO15054 1643 aa19.03■□□□□ 0.64
PVT1-203ENST00000513868 ROCK1Q13464 1354 aa19.02■□□□□ 0.64
PVT1-203ENST00000513868 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
PVT1-203ENST00000513868 WDR7Q9Y4E6 1490 aa19.01■□□□□ 0.63
PVT1-203ENST00000513868 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
PVT1-203ENST00000513868 ARHGEF5Q12774 1597 aa19■□□□□ 0.63
PVT1-203ENST00000513868 KCNH8Q96L42 1107 aa19■□□□□ 0.63
PVT1-203ENST00000513868 MBD5Q9P267 1494 aa18.98■□□□□ 0.63
PVT1-203ENST00000513868 ARHGAP5Q13017 1502 aa18.98■□□□□ 0.63
PVT1-203ENST00000513868 ADGRL2O95490 1459 aa18.98■□□□□ 0.63
PVT1-203ENST00000513868 RIMBP3CA6NJZ7 1639 aa18.97■□□□□ 0.63
PVT1-203ENST00000513868 RIMBP3BA6NNM3 1639 aa18.97■□□□□ 0.63
PVT1-203ENST00000513868 RIMBP3Q9UFD9 1639 aa18.97■□□□□ 0.63
PVT1-203ENST00000513868 PLCH2O75038 1416 aa18.96■□□□□ 0.63
PVT1-203ENST00000513868 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
PVT1-203ENST00000513868 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
PVT1-203ENST00000513868 ASXL2Q76L83 1435 aa18.95■□□□□ 0.62
PVT1-203ENST00000513868 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
PVT1-203ENST00000513868 ARAP3Q8WWN8 1544 aa18.93■□□□□ 0.62
PVT1-203ENST00000513868 SYCP2Q9BX26 1530 aa18.92■□□□□ 0.62
PVT1-203ENST00000513868 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.621e-6■■■■■ 30.3
PVT1-203ENST00000513868 C9orf84Q5VXU9 1444 aa18.9■□□□□ 0.62
PVT1-203ENST00000513868 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
PVT1-203ENST00000513868 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
PVT1-203ENST00000513868 ARHGEF12Q9NZN5 1544 aa18.89■□□□□ 0.61
PVT1-203ENST00000513868 PLEKHH2Q8IVE3 1493 aa18.88■□□□□ 0.61
PVT1-203ENST00000513868 MAST1Q9Y2H9 1570 aa18.88■□□□□ 0.61
PVT1-203ENST00000513868 DENND4BO75064 1496 aaPredicted RBP18.87■□□□□ 0.61
PVT1-203ENST00000513868 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
PVT1-203ENST00000513868 ABCC1P33527 1531 aa18.87■□□□□ 0.61
PVT1-203ENST00000513868 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
PVT1-203ENST00000513868 RSPH4AQ5TD94 716 aa18.86■□□□□ 0.61
PVT1-203ENST00000513868 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
PVT1-203ENST00000513868 TSPY4P0CV99 314 aa18.83■□□□□ 0.61
PVT1-203ENST00000513868 TSPY10P0CW01 314 aa18.83■□□□□ 0.61
PVT1-203ENST00000513868 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
PVT1-203ENST00000513868 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
PVT1-203ENST00000513868 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
PVT1-203ENST00000513868 ANKRD50Q9ULJ7 1429 aa18.8■□□□□ 0.6
PVT1-203ENST00000513868 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
PVT1-203ENST00000513868 FANCAO15360 1455 aa18.79■□□□□ 0.6
PVT1-203ENST00000513868 TRIM52Q96A61 297 aa18.79■□□□□ 0.6
PVT1-203ENST00000513868 TRAPPC8Q9Y2L5 1435 aa18.78■□□□□ 0.6
PVT1-203ENST00000513868 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
PVT1-203ENST00000513868 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
PVT1-203ENST00000513868 PZPP20742 1482 aa18.76■□□□□ 0.59
PVT1-203ENST00000513868 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
PVT1-203ENST00000513868 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
PVT1-203ENST00000513868 NEUROD1Q13562 356 aa18.72■□□□□ 0.59
PVT1-203ENST00000513868 MAP3K4Q9Y6R4 1608 aa18.72■□□□□ 0.59
PVT1-203ENST00000513868 KDM5DQ9BY66 1539 aa18.72■□□□□ 0.59
PVT1-203ENST00000513868 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
PVT1-203ENST00000513868 ZFYVE16Q7Z3T8 1539 aa18.7■□□□□ 0.58
PVT1-203ENST00000513868 INO80Q9ULG1 1556 aaPredicted RBP18.7■□□□□ 0.58
PVT1-203ENST00000513868 TIMELESSQ9UNS1 1208 aa18.69■□□□□ 0.58
PVT1-203ENST00000513868 GLI2P10070 1586 aa18.69■□□□□ 0.58
PVT1-203ENST00000513868 RTEL1-TNFRSF6BF6WH68 1400 aa18.69■□□□□ 0.58
PVT1-203ENST00000513868 DUOX2Q9NRD8 1548 aa18.68■□□□□ 0.58
PVT1-203ENST00000513868 UNC13BO14795 1591 aa18.68■□□□□ 0.58
PVT1-203ENST00000513868 SCAPERQ9BY12 1400 aa18.68■□□□□ 0.58
PVT1-203ENST00000513868 AFAP1Q8N556 730 aa18.68■□□□□ 0.58
PVT1-203ENST00000513868 SLC4A1APQ9BWU0 796 aaKnown RBP18.66■□□□□ 0.58
PVT1-203ENST00000513868 ANKRD30BQ9BXX2 1392 aa18.66■□□□□ 0.58
PVT1-203ENST00000513868 FOXD1Q16676 465 aa18.66■□□□□ 0.58
PVT1-203ENST00000513868 ATP7AQ04656 1500 aa18.65■□□□□ 0.58
PVT1-203ENST00000513868 DIP2BQ9P265 1576 aa18.65■□□□□ 0.58
PVT1-203ENST00000513868 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
PVT1-203ENST00000513868 KIDINS220Q9ULH0 1771 aa18.64■□□□□ 0.57
PVT1-203ENST00000513868 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
PVT1-203ENST00000513868 NUP155O75694 1391 aa18.63■□□□□ 0.57
PVT1-203ENST00000513868 ZNF316A6NFI3 1004 aaPredicted RBP18.62■□□□□ 0.57
PVT1-203ENST00000513868 NEO1Q92859 1461 aa18.61■□□□□ 0.57
PVT1-203ENST00000513868 IQGAP3Q86VI3 1631 aa18.61■□□□□ 0.57
PVT1-203ENST00000513868 KDM5CP41229 1560 aa18.61■□□□□ 0.57
PVT1-203ENST00000513868 MAGI2Q86UL8 1455 aa18.61■□□□□ 0.57
PVT1-203ENST00000513868 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
PVT1-203ENST00000513868 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
PVT1-203ENST00000513868 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
PVT1-203ENST00000513868 TONSLQ96HA7 1378 aa18.58■□□□□ 0.57
PVT1-203ENST00000513868 PPRC1Q5VV67 1664 aaKnown RBP18.58■□□□□ 0.57
PVT1-203ENST00000513868 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.57
PVT1-203ENST00000513868 PKD2Q13563 968 aa18.58■□□□□ 0.57
PVT1-203ENST00000513868 POGZQ7Z3K3 1410 aa18.58■□□□□ 0.56
PVT1-203ENST00000513868 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.56
PVT1-203ENST00000513868 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
PVT1-203ENST00000513868 TSPOAP1O95153 1857 aa18.57■□□□□ 0.56
PVT1-203ENST00000513868 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
PVT1-203ENST00000513868 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms