RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 TTC37Q6PGP7 1564 aa11.67□□□□□ -0.54
HTT-212ENST00000513639 MLECQ14165 292 aa11.65□□□□□ -0.54
HTT-212ENST00000513639 ATP10AO60312 1499 aa11.64□□□□□ -0.55
HTT-212ENST00000513639 PTPRMP28827 1452 aa11.64□□□□□ -0.55
HTT-212ENST00000513639 FYCO1Q9BQS8 1478 aa11.64□□□□□ -0.55
HTT-212ENST00000513639 ARHGAP5Q13017 1502 aa11.64□□□□□ -0.55
HTT-212ENST00000513639 KIF14Q15058 1648 aa11.64□□□□□ -0.55
HTT-212ENST00000513639 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
HTT-212ENST00000513639 ZNF777Q9ULD5 760 aaPredicted RBP11.63□□□□□ -0.55
HTT-212ENST00000513639 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
HTT-212ENST00000513639 FRMPD1Q5SYB0 1578 aa11.62□□□□□ -0.55
HTT-212ENST00000513639 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
HTT-212ENST00000513639 ZFYVE16Q7Z3T8 1539 aa11.62□□□□□ -0.55
HTT-212ENST00000513639 ZMYM4Q5VZL5 1548 aa11.61□□□□□ -0.55
HTT-212ENST00000513639 RICTORQ6R327 1708 aa11.61□□□□□ -0.55
HTT-212ENST00000513639 ESF1Q9H501 851 aaKnown RBP11.61□□□□□ -0.55
HTT-212ENST00000513639 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
HTT-212ENST00000513639 CCNB3Q8WWL7 1395 aa11.6□□□□□ -0.55
HTT-212ENST00000513639 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
HTT-212ENST00000513639 ARHGEF40Q8TER5 1519 aa11.6□□□□□ -0.55
HTT-212ENST00000513639 ADAMTSL3P82987 1691 aa11.59□□□□□ -0.55
HTT-212ENST00000513639 HNRNPMP52272 730 aaKnown RBP eCLIP11.59□□□□□ -0.55
HTT-212ENST00000513639 MYO5CQ9NQX4 1742 aa11.59□□□□□ -0.55
HTT-212ENST00000513639 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
HTT-212ENST00000513639 CEP162Q5TB80 1403 aa11.58□□□□□ -0.56
HTT-212ENST00000513639 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.56
HTT-212ENST00000513639 HECW2Q9P2P5 1572 aa11.58□□□□□ -0.56
HTT-212ENST00000513639 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
HTT-212ENST00000513639 MLH3Q9UHC1 1453 aa11.57□□□□□ -0.56
HTT-212ENST00000513639 SPAG9O60271 1321 aaKnown RBP11.57□□□□□ -0.56
HTT-212ENST00000513639 GPATCH8Q9UKJ3 1502 aaKnown RBP11.56□□□□□ -0.56
HTT-212ENST00000513639 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
HTT-212ENST00000513639 KIAA1107Q9UPP5 1409 aa11.56□□□□□ -0.56
HTT-212ENST00000513639 TRAPPC8Q9Y2L5 1435 aa11.55□□□□□ -0.56
HTT-212ENST00000513639 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
HTT-212ENST00000513639 LRRIQ1Q96JM4 1722 aa11.53□□□□□ -0.56
HTT-212ENST00000513639 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
HTT-212ENST00000513639 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
HTT-212ENST00000513639 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.56
HTT-212ENST00000513639 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.57
HTT-212ENST00000513639 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
HTT-212ENST00000513639 KDM5CP41229 1560 aa11.52□□□□□ -0.57
HTT-212ENST00000513639 APLP2Q06481 763 aa11.51□□□□□ -0.57
HTT-212ENST00000513639 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
HTT-212ENST00000513639 PREX2Q70Z35 1606 aa11.5□□□□□ -0.57
HTT-212ENST00000513639 TSPY4P0CV99 314 aa11.5□□□□□ -0.57
HTT-212ENST00000513639 TSPY10P0CW01 314 aa11.5□□□□□ -0.57
HTT-212ENST00000513639 HSPA2P54652 639 aa11.5□□□□□ -0.57
HTT-212ENST00000513639 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
HTT-212ENST00000513639 ABCC1P33527 1531 aa11.5□□□□□ -0.57
HTT-212ENST00000513639 AGLP35573 1532 aa11.48□□□□□ -0.57
HTT-212ENST00000513639 RIMS1Q86UR5 1692 aaKnown RBP11.47□□□□□ -0.57
HTT-212ENST00000513639 REREQ9P2R6 1566 aa11.47□□□□□ -0.57
HTT-212ENST00000513639 LMTK3Q96Q04 1460 aa11.47□□□□□ -0.57
HTT-212ENST00000513639 CNTLNQ9NXG0 1405 aa11.47□□□□□ -0.57
HTT-212ENST00000513639 GGT6Q6P531 493 aa11.47□□□□□ -0.57
HTT-212ENST00000513639 CDC42BPAQ5VT25 1732 aa11.46□□□□□ -0.57
HTT-212ENST00000513639 VPS8Q8N3P4 1428 aa11.46□□□□□ -0.57
HTT-212ENST00000513639 SETD1BQ9UPS6 1966 aaKnown RBP11.46□□□□□ -0.58
HTT-212ENST00000513639 SAMD9LQ8IVG5 1584 aa11.45□□□□□ -0.58
HTT-212ENST00000513639 DIP2CQ9Y2E4 1556 aa11.45□□□□□ -0.58
HTT-212ENST00000513639 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
HTT-212ENST00000513639 RTEL1-TNFRSF6BF6WH68 1400 aa11.44□□□□□ -0.58
HTT-212ENST00000513639 ZMYM3Q14202 1370 aa11.44□□□□□ -0.58
HTT-212ENST00000513639 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
HTT-212ENST00000513639 SYCP2Q9BX26 1530 aa11.44□□□□□ -0.58
HTT-212ENST00000513639 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
HTT-212ENST00000513639 DHX29Q7Z478 1369 aaKnown RBP11.43□□□□□ -0.58
HTT-212ENST00000513639 ITSN2Q9NZM3 1697 aa11.43□□□□□ -0.58
HTT-212ENST00000513639 A2MP01023 1474 aa11.43□□□□□ -0.58
HTT-212ENST00000513639 NCOA2Q15596 1464 aa11.43□□□□□ -0.58
HTT-212ENST00000513639 MBD5Q9P267 1494 aa11.43□□□□□ -0.58
HTT-212ENST00000513639 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
HTT-212ENST00000513639 FER1L4A9Z1Z3 1794 aa11.42□□□□□ -0.58
HTT-212ENST00000513639 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
HTT-212ENST00000513639 ABCA6Q8N139 1617 aa11.42□□□□□ -0.58
HTT-212ENST00000513639 KIDINS220Q9ULH0 1771 aa11.41□□□□□ -0.58
HTT-212ENST00000513639 LRRC9Q6ZRR7 1453 aa11.41□□□□□ -0.58
HTT-212ENST00000513639 KIF3BO15066 747 aa11.41□□□□□ -0.58
HTT-212ENST00000513639 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
HTT-212ENST00000513639 ATP7AQ04656 1500 aa11.4□□□□□ -0.58
HTT-212ENST00000513639 MAP3K1Q13233 1512 aa11.4□□□□□ -0.58
HTT-212ENST00000513639 WASHC2CQ9Y4E1 1318 aa11.39□□□□□ -0.59
HTT-212ENST00000513639 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
HTT-212ENST00000513639 NPATQ14207 1427 aa11.38□□□□□ -0.59
HTT-212ENST00000513639 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
HTT-212ENST00000513639 CCDC141Q6ZP82 1450 aa11.38□□□□□ -0.59
HTT-212ENST00000513639 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
HTT-212ENST00000513639 MIA2Q96PC5 1412 aa11.37□□□□□ -0.59
HTT-212ENST00000513639 CAMSAP2Q08AD1 1489 aa11.35□□□□□ -0.59
HTT-212ENST00000513639 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
HTT-212ENST00000513639 PREX1Q8TCU6 1659 aa11.34□□□□□ -0.59
HTT-212ENST00000513639 INO80Q9ULG1 1556 aaPredicted RBP11.34□□□□□ -0.59
HTT-212ENST00000513639 PKD2Q13563 968 aa11.34□□□□□ -0.59
HTT-212ENST00000513639 PTPRTO14522 1441 aa11.33□□□□□ -0.6
HTT-212ENST00000513639 PLXNC1O60486 1568 aa11.33□□□□□ -0.6
HTT-212ENST00000513639 ADGBQ8N7X0 1667 aa11.32□□□□□ -0.6
HTT-212ENST00000513639 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
HTT-212ENST00000513639 C3P01024 1663 aa11.31□□□□□ -0.6
HTT-212ENST00000513639 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms