RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 HECW2Q9P2P5 1572 aa20.42■□□□□ 0.86
UBE2D3-231ENST00000513098 KIF14Q15058 1648 aa20.42■□□□□ 0.86
UBE2D3-231ENST00000513098 BCORL1Q5H9F3 1711 aa20.41■□□□□ 0.86
UBE2D3-231ENST00000513098 MYO5CQ9NQX4 1742 aa20.41■□□□□ 0.86
UBE2D3-231ENST00000513098 ZFYVE16Q7Z3T8 1539 aa20.38■□□□□ 0.85
UBE2D3-231ENST00000513098 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
UBE2D3-231ENST00000513098 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
UBE2D3-231ENST00000513098 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
UBE2D3-231ENST00000513098 ATP10AO60312 1499 aa20.34■□□□□ 0.85
UBE2D3-231ENST00000513098 ZNF518AQ6AHZ1 1483 aa20.34■□□□□ 0.85
UBE2D3-231ENST00000513098 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.85
UBE2D3-231ENST00000513098 MADDQ8WXG6 1647 aa20.33■□□□□ 0.84
UBE2D3-231ENST00000513098 AFAP1Q8N556 730 aa20.32■□□□□ 0.84
UBE2D3-231ENST00000513098 CDC42BPBQ9Y5S2 1711 aa20.31■□□□□ 0.84
UBE2D3-231ENST00000513098 KDM5CP41229 1560 aa20.29■□□□□ 0.84
UBE2D3-231ENST00000513098 C9orf84Q5VXU9 1444 aa20.28■□□□□ 0.84
UBE2D3-231ENST00000513098 SIGLEC1Q9BZZ2 1709 aa20.28■□□□□ 0.84
UBE2D3-231ENST00000513098 MLH3Q9UHC1 1453 aa20.27■□□□□ 0.84
UBE2D3-231ENST00000513098 PREX2Q70Z35 1606 aa20.27■□□□□ 0.83
UBE2D3-231ENST00000513098 ARHGEF12Q9NZN5 1544 aa20.24■□□□□ 0.83
UBE2D3-231ENST00000513098 RIMS1Q86UR5 1692 aaKnown RBP20.23■□□□□ 0.83
UBE2D3-231ENST00000513098 ABCC1P33527 1531 aa20.22■□□□□ 0.83
UBE2D3-231ENST00000513098 GPATCH8Q9UKJ3 1502 aaKnown RBP20.22■□□□□ 0.83
UBE2D3-231ENST00000513098 CDC42BPAQ5VT25 1732 aa20.22■□□□□ 0.83
UBE2D3-231ENST00000513098 TRAPPC8Q9Y2L5 1435 aa20.22■□□□□ 0.83
UBE2D3-231ENST00000513098 MLECQ14165 292 aa20.21■□□□□ 0.83
UBE2D3-231ENST00000513098 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
UBE2D3-231ENST00000513098 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
UBE2D3-231ENST00000513098 CEP162Q5TB80 1403 aa20.18■□□□□ 0.82
UBE2D3-231ENST00000513098 KIAA1107Q9UPP5 1409 aa20.18■□□□□ 0.82
UBE2D3-231ENST00000513098 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
UBE2D3-231ENST00000513098 ILDR1Q86SU0 546 aaPredicted RBP20.17■□□□□ 0.82
UBE2D3-231ENST00000513098 ITSN2Q9NZM3 1697 aa20.16■□□□□ 0.82
UBE2D3-231ENST00000513098 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
UBE2D3-231ENST00000513098 MTUS2Q5JR59 1369 aa20.16■□□□□ 0.82
UBE2D3-231ENST00000513098 FER1L4A9Z1Z3 1794 aa20.16■□□□□ 0.82
UBE2D3-231ENST00000513098 CFDP1Q9UEE9 299 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-231ENST00000513098 AGLP35573 1532 aa20.15■□□□□ 0.82
UBE2D3-231ENST00000513098 CCNB3Q8WWL7 1395 aa20.14■□□□□ 0.81
UBE2D3-231ENST00000513098 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.81
UBE2D3-231ENST00000513098 PLEKHH2Q8IVE3 1493 aa20.13■□□□□ 0.81
UBE2D3-231ENST00000513098 ABCA6Q8N139 1617 aa20.13■□□□□ 0.81
UBE2D3-231ENST00000513098 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
UBE2D3-231ENST00000513098 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.81
UBE2D3-231ENST00000513098 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
UBE2D3-231ENST00000513098 SETD1BQ9UPS6 1966 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-231ENST00000513098 SPAG9O60271 1321 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-231ENST00000513098 CEBPAP49715 358 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-231ENST00000513098 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
UBE2D3-231ENST00000513098 SYCP2Q9BX26 1530 aa20.07■□□□□ 0.8
UBE2D3-231ENST00000513098 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
UBE2D3-231ENST00000513098 HSPA2P54652 639 aa20.06■□□□□ 0.8
UBE2D3-231ENST00000513098 LOC105371045A0A1W2PR82 267 aa20.05■□□□□ 0.8
UBE2D3-231ENST00000513098 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
UBE2D3-231ENST00000513098 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
UBE2D3-231ENST00000513098 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.8
UBE2D3-231ENST00000513098 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.8
UBE2D3-231ENST00000513098 ESF1Q9H501 851 aaKnown RBP20.02■□□□□ 0.8
UBE2D3-231ENST00000513098 ATP7AQ04656 1500 aa20.01■□□□□ 0.79
UBE2D3-231ENST00000513098 RSPH4AQ5TD94 716 aa20■□□□□ 0.79
UBE2D3-231ENST00000513098 PREX1Q8TCU6 1659 aa20■□□□□ 0.79
UBE2D3-231ENST00000513098 INO80Q9ULG1 1556 aaPredicted RBP20■□□□□ 0.79
UBE2D3-231ENST00000513098 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
UBE2D3-231ENST00000513098 RTEL1-TNFRSF6BF6WH68 1400 aa19.99■□□□□ 0.79
UBE2D3-231ENST00000513098 VPS8Q8N3P4 1428 aa19.99■□□□□ 0.79
UBE2D3-231ENST00000513098 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
UBE2D3-231ENST00000513098 A2MP01023 1474 aa19.98■□□□□ 0.79
UBE2D3-231ENST00000513098 NCOA2Q15596 1464 aa19.98■□□□□ 0.79
UBE2D3-231ENST00000513098 PLXNC1O60486 1568 aa19.97■□□□□ 0.79
UBE2D3-231ENST00000513098 C3P01024 1663 aa19.97■□□□□ 0.79
UBE2D3-231ENST00000513098 UHRF1BP1Q6BDS2 1440 aa19.96■□□□□ 0.79
UBE2D3-231ENST00000513098 SUPT6HQ7KZ85 1726 aaKnown RBP19.94■□□□□ 0.78
UBE2D3-231ENST00000513098 MAP3K1Q13233 1512 aa19.94■□□□□ 0.78
UBE2D3-231ENST00000513098 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
UBE2D3-231ENST00000513098 ZMYM3Q14202 1370 aa19.94■□□□□ 0.78
UBE2D3-231ENST00000513098 NPATQ14207 1427 aa19.93■□□□□ 0.78
UBE2D3-231ENST00000513098 LRRC9Q6ZRR7 1453 aa19.92■□□□□ 0.78
UBE2D3-231ENST00000513098 MROH2AA6NES4 1674 aa19.91■□□□□ 0.78
UBE2D3-231ENST00000513098 DHX29Q7Z478 1369 aaKnown RBP19.91■□□□□ 0.78
UBE2D3-231ENST00000513098 ADGBQ8N7X0 1667 aa19.91■□□□□ 0.78
UBE2D3-231ENST00000513098 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
UBE2D3-231ENST00000513098 CCDC141Q6ZP82 1450 aa19.88■□□□□ 0.77
UBE2D3-231ENST00000513098 GGT6Q6P531 493 aa19.88■□□□□ 0.77
UBE2D3-231ENST00000513098 STRCQ7RTU9 1775 aa19.88■□□□□ 0.77
UBE2D3-231ENST00000513098 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
UBE2D3-231ENST00000513098 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
UBE2D3-231ENST00000513098 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
UBE2D3-231ENST00000513098 ARHGEF5Q12774 1597 aa19.85■□□□□ 0.77
UBE2D3-231ENST00000513098 CERKQ8TCT0 537 aa19.84■□□□□ 0.77
UBE2D3-231ENST00000513098 PTPRTO14522 1441 aa19.84■□□□□ 0.77
UBE2D3-231ENST00000513098 PTPRKQ15262 1439 aa19.83■□□□□ 0.76
UBE2D3-231ENST00000513098 MIA2Q96PC5 1412 aa19.82■□□□□ 0.76
UBE2D3-231ENST00000513098 CLTCQ00610 1675 aaKnown RBP19.81■□□□□ 0.76
UBE2D3-231ENST00000513098 KIF3BO15066 747 aa19.8■□□□□ 0.76
UBE2D3-231ENST00000513098 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
UBE2D3-231ENST00000513098 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
UBE2D3-231ENST00000513098 FAM135AQ9P2D6 1515 aa19.78■□□□□ 0.76
UBE2D3-231ENST00000513098 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
UBE2D3-231ENST00000513098 APLP2Q06481 763 aa19.73■□□□□ 0.75
UBE2D3-231ENST00000513098 PKD2Q13563 968 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms