RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
SDHC-208ENST00000513009 CD109Q6YHK3 1445 aa14.21□□□□□ -0.13
SDHC-208ENST00000513009 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
SDHC-208ENST00000513009 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
SDHC-208ENST00000513009 KIF21BO75037 1637 aa14.14□□□□□ -0.15
SDHC-208ENST00000513009 ARAP3Q8WWN8 1544 aa14.14□□□□□ -0.15
SDHC-208ENST00000513009 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
SDHC-208ENST00000513009 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
SDHC-208ENST00000513009 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
SDHC-208ENST00000513009 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
SDHC-208ENST00000513009 ABCA9Q8IUA7 1624 aa14.09□□□□□ -0.15
SDHC-208ENST00000513009 ATP10BO94823 1461 aa14.07□□□□□ -0.16
SDHC-208ENST00000513009 ADAMTSL3P82987 1691 aa14.07□□□□□ -0.16
SDHC-208ENST00000513009 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
SDHC-208ENST00000513009 NEO1Q92859 1461 aa14.04□□□□□ -0.16
SDHC-208ENST00000513009 PTPRMP28827 1452 aa14.03□□□□□ -0.16
SDHC-208ENST00000513009 SAMD9Q5K651 1589 aa14.03□□□□□ -0.16
SDHC-208ENST00000513009 RAPGEF6Q8TEU7 1601 aa14.01□□□□□ -0.17
SDHC-208ENST00000513009 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
SDHC-208ENST00000513009 BCORL1Q5H9F3 1711 aa14.01□□□□□ -0.17
SDHC-208ENST00000513009 FRMPD1Q5SYB0 1578 aa14□□□□□ -0.17
SDHC-208ENST00000513009 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
SDHC-208ENST00000513009 ARID3CA6NKF2 412 aa13.98□□□□□ -0.17
SDHC-208ENST00000513009 RAPGEF3O95398 923 aa13.98□□□□□ -0.17
SDHC-208ENST00000513009 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
SDHC-208ENST00000513009 P3H3Q8IVL6 736 aa13.97□□□□□ -0.17
SDHC-208ENST00000513009 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
SDHC-208ENST00000513009 MADDQ8WXG6 1647 aa13.97□□□□□ -0.17
SDHC-208ENST00000513009 PCF11O94913 1555 aaKnown RBP13.96□□□□□ -0.18
SDHC-208ENST00000513009 NUP153P49790 1475 aaKnown RBP13.95□□□□□ -0.18
SDHC-208ENST00000513009 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
SDHC-208ENST00000513009 RICTORQ6R327 1708 aa13.94□□□□□ -0.18
SDHC-208ENST00000513009 LMTK3Q96Q04 1460 aa13.93□□□□□ -0.18
SDHC-208ENST00000513009 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
SDHC-208ENST00000513009 CFAP74Q9C0B2 1584 aa13.92□□□□□ -0.18
SDHC-208ENST00000513009 DENND4BO75064 1496 aaPredicted RBP13.91□□□□□ -0.18
SDHC-208ENST00000513009 RIMS1Q86UR5 1692 aaKnown RBP13.91□□□□□ -0.18
SDHC-208ENST00000513009 ARID4BQ4LE39 1312 aaPredicted RBP13.9□□□□□ -0.18
SDHC-208ENST00000513009 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.19
SDHC-208ENST00000513009 FHOD3Q2V2M9 1422 aa13.9□□□□□ -0.19
SDHC-208ENST00000513009 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
SDHC-208ENST00000513009 AKNAQ7Z591 1439 aa13.89□□□□□ -0.19
SDHC-208ENST00000513009 FANCAO15360 1455 aa13.87□□□□□ -0.19
SDHC-208ENST00000513009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
SDHC-208ENST00000513009 PLEKHD1A6NEE1 506 aa13.87□□□□□ -0.19
SDHC-208ENST00000513009 EEA1Q15075 1411 aa13.86□□□□□ -0.19
SDHC-208ENST00000513009 POGZQ7Z3K3 1410 aa13.86□□□□□ -0.19
SDHC-208ENST00000513009 EFCAB5A4FU69 1503 aa13.85□□□□□ -0.19
SDHC-208ENST00000513009 MAGI2Q86UL8 1455 aa13.85□□□□□ -0.19
SDHC-208ENST00000513009 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
SDHC-208ENST00000513009 SIGLEC1Q9BZZ2 1709 aa13.84□□□□□ -0.19
SDHC-208ENST00000513009 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
SDHC-208ENST00000513009 YEATS2Q9ULM3 1422 aa13.81□□□□□ -0.2
SDHC-208ENST00000513009 FER1L4A9Z1Z3 1794 aa13.81□□□□□ -0.2
SDHC-208ENST00000513009 HECW1Q76N89 1606 aa13.81□□□□□ -0.2
SDHC-208ENST00000513009 HSPA2P54652 639 aa13.79□□□□□ -0.2
SDHC-208ENST00000513009 PLCH2O75038 1416 aa13.78□□□□□ -0.2
SDHC-208ENST00000513009 RANGAP1P46060 587 aaPredicted RBP13.77□□□□□ -0.21
SDHC-208ENST00000513009 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
SDHC-208ENST00000513009 ARHGEF12Q9NZN5 1544 aa13.76□□□□□ -0.21
SDHC-208ENST00000513009 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
SDHC-208ENST00000513009 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
SDHC-208ENST00000513009 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
SDHC-208ENST00000513009 MYO5CQ9NQX4 1742 aa13.75□□□□□ -0.21
SDHC-208ENST00000513009 ATP10AO60312 1499 aa13.74□□□□□ -0.21
SDHC-208ENST00000513009 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
SDHC-208ENST00000513009 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
SDHC-208ENST00000513009 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
SDHC-208ENST00000513009 MLECQ14165 292 aa13.72□□□□□ -0.21
SDHC-208ENST00000513009 EFCAB2Q5VUJ9 269 aa13.7□□□□□ -0.22
SDHC-208ENST00000513009 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
SDHC-208ENST00000513009 KDM5CP41229 1560 aa13.7□□□□□ -0.22
SDHC-208ENST00000513009 SETD1BQ9UPS6 1966 aaKnown RBP13.69□□□□□ -0.22
SDHC-208ENST00000513009 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
SDHC-208ENST00000513009 STRCQ7RTU9 1775 aa13.68□□□□□ -0.22
SDHC-208ENST00000513009 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
SDHC-208ENST00000513009 PROM2Q8N271 834 aa13.68□□□□□ -0.22
SDHC-208ENST00000513009 KIF14Q15058 1648 aa13.68□□□□□ -0.22
SDHC-208ENST00000513009 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
SDHC-208ENST00000513009 CDK11AQ9UQ88 783 aaPredicted RBP13.67□□□□□ -0.22
SDHC-208ENST00000513009 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
SDHC-208ENST00000513009 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
SDHC-208ENST00000513009 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
SDHC-208ENST00000513009 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
SDHC-208ENST00000513009 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
SDHC-208ENST00000513009 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
SDHC-208ENST00000513009 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
SDHC-208ENST00000513009 LRRIQ1Q96JM4 1722 aa13.63□□□□□ -0.23
SDHC-208ENST00000513009 CDC42BPBQ9Y5S2 1711 aa13.63□□□□□ -0.23
SDHC-208ENST00000513009 CLIP1P30622 1438 aa13.63□□□□□ -0.23
SDHC-208ENST00000513009 C3P01024 1663 aa13.63□□□□□ -0.23
SDHC-208ENST00000513009 MLH3Q9UHC1 1453 aa13.62□□□□□ -0.23
SDHC-208ENST00000513009 HAX1O00165 279 aa13.62□□□□□ -0.23
SDHC-208ENST00000513009 AFAP1Q8N556 730 aa13.62□□□□□ -0.23
SDHC-208ENST00000513009 AGLP35573 1532 aa13.62□□□□□ -0.23
SDHC-208ENST00000513009 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
SDHC-208ENST00000513009 ATP1B4Q9UN42 357 aaPredicted RBP13.61□□□□□ -0.23
SDHC-208ENST00000513009 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
SDHC-208ENST00000513009 PTPRTO14522 1441 aa13.6□□□□□ -0.23
SDHC-208ENST00000513009 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms