RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 FGD1P98174 961 aa15.91■□□□□ 0.14
COL11A1-210ENST00000512756 NRDCO43847 1150 aa15.91■□□□□ 0.14
COL11A1-210ENST00000512756 MCCP23508 829 aa15.91■□□□□ 0.14
COL11A1-210ENST00000512756 IPO8O15397 1037 aaKnown RBP15.9■□□□□ 0.14
COL11A1-210ENST00000512756 SRPK2P78362 688 aaKnown RBP15.9■□□□□ 0.14
COL11A1-210ENST00000512756 TCERG1O14776 1098 aaKnown RBP15.9■□□□□ 0.14
COL11A1-210ENST00000512756 RCAN3Q9UKA8 241 aa15.9■□□□□ 0.14
COL11A1-210ENST00000512756 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
COL11A1-210ENST00000512756 PLCB2Q00722 1185 aa15.89■□□□□ 0.14
COL11A1-210ENST00000512756 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.14
COL11A1-210ENST00000512756 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
COL11A1-210ENST00000512756 DEKP35659 375 aaKnown RBP15.87■□□□□ 0.13
COL11A1-210ENST00000512756 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
COL11A1-210ENST00000512756 CARMIL2Q6F5E8 1435 aa15.87■□□□□ 0.13
COL11A1-210ENST00000512756 GOLGA6L4A6NEF3 574 aa15.87■□□□□ 0.13
COL11A1-210ENST00000512756 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
COL11A1-210ENST00000512756 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
COL11A1-210ENST00000512756 CALD1Q05682 793 aaKnown RBP15.86■□□□□ 0.13
COL11A1-210ENST00000512756 PTMSP20962 102 aa15.85■□□□□ 0.13
COL11A1-210ENST00000512756 ROCK2O75116 1388 aaKnown RBP15.85■□□□□ 0.13
COL11A1-210ENST00000512756 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
COL11A1-210ENST00000512756 RWDD1Q9H446 243 aaPredicted RBP15.85■□□□□ 0.13
COL11A1-210ENST00000512756 HDGFL2Q7Z4V5 671 aaPredicted RBP15.84■□□□□ 0.13
COL11A1-210ENST00000512756 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
COL11A1-210ENST00000512756 NUP155O75694 1391 aa15.83■□□□□ 0.13
COL11A1-210ENST00000512756 FOXD1Q16676 465 aa15.82■□□□□ 0.12
COL11A1-210ENST00000512756 MSNP26038 577 aaKnown RBP15.82■□□□□ 0.12
COL11A1-210ENST00000512756 CHAF1AQ13111 956 aaPredicted RBP15.82■□□□□ 0.12
COL11A1-210ENST00000512756 RTF1Q92541 710 aaKnown RBP15.82■□□□□ 0.12
COL11A1-210ENST00000512756 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
COL11A1-210ENST00000512756 GBP4Q96PP9 640 aa15.81■□□□□ 0.12
COL11A1-210ENST00000512756 EIF3AQ14152 1382 aaKnown RBP15.8■□□□□ 0.12
COL11A1-210ENST00000512756 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
COL11A1-210ENST00000512756 U2AF1L5P0DN76 240 aaPredicted RBP15.79■□□□□ 0.12
COL11A1-210ENST00000512756 U2AF1Q01081 240 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL11A1-210ENST00000512756 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
COL11A1-210ENST00000512756 NAP1L2Q9ULW6 460 aaPredicted RBP15.78■□□□□ 0.12
COL11A1-210ENST00000512756 NLRP13Q86W25 1043 aa15.77■□□□□ 0.12
COL11A1-210ENST00000512756 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
COL11A1-210ENST00000512756 L3MBTL2Q969R5 705 aa15.77■□□□□ 0.11
COL11A1-210ENST00000512756 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
COL11A1-210ENST00000512756 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.11
COL11A1-210ENST00000512756 GGT6Q6P531 493 aa15.76■□□□□ 0.11
COL11A1-210ENST00000512756 GOLGA2Q08379 1002 aa15.76■□□□□ 0.11
COL11A1-210ENST00000512756 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
COL11A1-210ENST00000512756 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
COL11A1-210ENST00000512756 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
COL11A1-210ENST00000512756 KIAA1211Q6ZU35 1233 aa15.75■□□□□ 0.11
COL11A1-210ENST00000512756 PHLDB1Q86UU1 1377 aa15.75■□□□□ 0.11
COL11A1-210ENST00000512756 ITPRIPQ8IWB1 547 aa15.74■□□□□ 0.11
COL11A1-210ENST00000512756 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
COL11A1-210ENST00000512756 IPO9Q96P70 1041 aaKnown RBP15.74■□□□□ 0.11
COL11A1-210ENST00000512756 RAPGEF2Q9Y4G8 1499 aa15.73■□□□□ 0.11
COL11A1-210ENST00000512756 STK26Q9P289 416 aa15.73■□□□□ 0.11
COL11A1-210ENST00000512756 SOX12O15370 315 aa15.72■□□□□ 0.11
COL11A1-210ENST00000512756 NPHP1O15259 732 aa15.72■□□□□ 0.11
COL11A1-210ENST00000512756 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
COL11A1-210ENST00000512756 TAOK2Q9UL54 1235 aa15.7■□□□□ 0.1
COL11A1-210ENST00000512756 CCDC18Q5T9S5 1454 aa15.7■□□□□ 0.1
COL11A1-210ENST00000512756 DRC7Q8IY82 874 aa15.7■□□□□ 0.1
COL11A1-210ENST00000512756 SYAP1Q96A49 352 aaPredicted RBP15.69■□□□□ 0.1
COL11A1-210ENST00000512756 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
COL11A1-210ENST00000512756 MLECQ14165 292 aa15.69■□□□□ 0.1
COL11A1-210ENST00000512756 SLKQ9H2G2 1235 aaPredicted RBP15.69■□□□□ 0.1
COL11A1-210ENST00000512756 KIF15Q9NS87 1388 aa15.68■□□□□ 0.1
COL11A1-210ENST00000512756 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
COL11A1-210ENST00000512756 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
COL11A1-210ENST00000512756 HDAC5Q9UQL6 1122 aa15.68■□□□□ 0.1
COL11A1-210ENST00000512756 APBB1O00213 710 aa15.68■□□□□ 0.1
COL11A1-210ENST00000512756 KIAA2012Q0VF49 1180 aa15.67■□□□□ 0.1
COL11A1-210ENST00000512756 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
COL11A1-210ENST00000512756 DHX57Q6P158 1386 aaKnown RBP15.67■□□□□ 0.1
COL11A1-210ENST00000512756 HMMRO75330 724 aa15.67■□□□□ 0.1
COL11A1-210ENST00000512756 STK31Q9BXU1 1019 aa15.66■□□□□ 0.1
COL11A1-210ENST00000512756 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
COL11A1-210ENST00000512756 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
COL11A1-210ENST00000512756 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
COL11A1-210ENST00000512756 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
COL11A1-210ENST00000512756 GOLGA6L3A6NEY3 463 aa15.64■□□□□ 0.09
COL11A1-210ENST00000512756 MFAP1P55081 439 aaKnown RBP15.64■□□□□ 0.09
COL11A1-210ENST00000512756 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
COL11A1-210ENST00000512756 KIF3BO15066 747 aa15.63■□□□□ 0.09
COL11A1-210ENST00000512756 TULP1O00294 542 aaPredicted RBP15.62■□□□□ 0.09
COL11A1-210ENST00000512756 GZF1Q9H116 711 aaPredicted RBP15.62■□□□□ 0.09
COL11A1-210ENST00000512756 WIZO95785 1651 aa15.62■□□□□ 0.09
COL11A1-210ENST00000512756 HNRNPMP52272 730 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL11A1-210ENST00000512756 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
COL11A1-210ENST00000512756 USP35Q9P2H5 1018 aa15.61■□□□□ 0.09
COL11A1-210ENST00000512756 GPATCH3Q96I76 525 aa15.6■□□□□ 0.09
COL11A1-210ENST00000512756 CENPQQ7L2Z9 268 aaPredicted RBP15.59■□□□□ 0.09
COL11A1-210ENST00000512756 CSPP1Q1MSJ5 1256 aa15.59■□□□□ 0.09
COL11A1-210ENST00000512756 CCDC146Q8IYE0 955 aa15.59■□□□□ 0.09
COL11A1-210ENST00000512756 PRKRIP1Q9H875 184 aaPredicted RBP15.59■□□□□ 0.09
COL11A1-210ENST00000512756 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
COL11A1-210ENST00000512756 CLUAP1Q96AJ1 413 aa15.58■□□□□ 0.08
COL11A1-210ENST00000512756 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
COL11A1-210ENST00000512756 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
COL11A1-210ENST00000512756 CCDC144AA2RUR9 1427 aa15.57■□□□□ 0.08
COL11A1-210ENST00000512756 TRIM6-TRIM34B2RNG4 842 aa15.55■□□□□ 0.08
COL11A1-210ENST00000512756 ST18O60284 1047 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms