RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 SCAPERQ9BY12 1400 aa23.97■■□□□ 1.43
LETM1-207ENST00000512669 CDK11AQ9UQ88 783 aaPredicted RBP23.97■■□□□ 1.43
LETM1-207ENST00000512669 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
LETM1-207ENST00000512669 FER1L4A9Z1Z3 1794 aa23.94■■□□□ 1.42
LETM1-207ENST00000512669 EFCAB2Q5VUJ9 269 aa23.92■■□□□ 1.42
LETM1-207ENST00000512669 SIGLEC1Q9BZZ2 1709 aa23.92■■□□□ 1.42
LETM1-207ENST00000512669 ATP10AO60312 1499 aa23.91■■□□□ 1.42
LETM1-207ENST00000512669 C9orf84Q5VXU9 1444 aa23.91■■□□□ 1.42
LETM1-207ENST00000512669 KIF14Q15058 1648 aa23.91■■□□□ 1.42
LETM1-207ENST00000512669 ARHGAP35Q9NRY4 1499 aa23.88■■□□□ 1.41
LETM1-207ENST00000512669 ZNF518AQ6AHZ1 1483 aa23.87■■□□□ 1.41
LETM1-207ENST00000512669 CLIP1P30622 1438 aa23.87■■□□□ 1.41
LETM1-207ENST00000512669 ATP1B4Q9UN42 357 aaPredicted RBP23.87■■□□□ 1.41
LETM1-207ENST00000512669 ARHGEF12Q9NZN5 1544 aa23.87■■□□□ 1.41
LETM1-207ENST00000512669 TROQ12816 1431 aaPredicted RBP23.86■■□□□ 1.41
LETM1-207ENST00000512669 MLECQ14165 292 aa23.85■■□□□ 1.41
LETM1-207ENST00000512669 HSPA2P54652 639 aa23.83■■□□□ 1.41
LETM1-207ENST00000512669 ARHGAP5Q13017 1502 aa23.83■■□□□ 1.41
LETM1-207ENST00000512669 KDM5CP41229 1560 aa23.82■■□□□ 1.4
LETM1-207ENST00000512669 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
LETM1-207ENST00000512669 PREX1Q8TCU6 1659 aa23.81■■□□□ 1.4
LETM1-207ENST00000512669 REREQ9P2R6 1566 aa23.78■■□□□ 1.4
LETM1-207ENST00000512669 CCDC18Q5T9S5 1454 aa23.75■■□□□ 1.39
LETM1-207ENST00000512669 MLH3Q9UHC1 1453 aa23.73■■□□□ 1.39
LETM1-207ENST00000512669 DIP2CQ9Y2E4 1556 aa23.73■■□□□ 1.39
LETM1-207ENST00000512669 LRRIQ1Q96JM4 1722 aa23.73■■□□□ 1.39
LETM1-207ENST00000512669 AFAP1Q8N556 730 aa23.72■■□□□ 1.39
LETM1-207ENST00000512669 CERKQ8TCT0 537 aa23.72■■□□□ 1.39
LETM1-207ENST00000512669 PREX2Q70Z35 1606 aa23.72■■□□□ 1.39
LETM1-207ENST00000512669 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
LETM1-207ENST00000512669 CDC42BPBQ9Y5S2 1711 aa23.71■■□□□ 1.39
LETM1-207ENST00000512669 MYT1LQ9UL68 1186 aa23.71■■□□□ 1.39
LETM1-207ENST00000512669 DMRT2Q9Y5R5 561 aa23.7■■□□□ 1.38
LETM1-207ENST00000512669 UHRF1BP1Q6BDS2 1440 aa23.69■■□□□ 1.38
LETM1-207ENST00000512669 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
LETM1-207ENST00000512669 ABCC1P33527 1531 aa23.69■■□□□ 1.38
LETM1-207ENST00000512669 AGLP35573 1532 aa23.68■■□□□ 1.38
LETM1-207ENST00000512669 ABCA6Q8N139 1617 aa23.67■■□□□ 1.38
LETM1-207ENST00000512669 ITSN2Q9NZM3 1697 aa23.65■■□□□ 1.38
LETM1-207ENST00000512669 CEBPAP49715 358 aaPredicted RBP23.65■■□□□ 1.38
LETM1-207ENST00000512669 ESF1Q9H501 851 aaKnown RBP23.63■■□□□ 1.37
LETM1-207ENST00000512669 TRAPPC8Q9Y2L5 1435 aa23.61■■□□□ 1.37
LETM1-207ENST00000512669 FYCO1Q9BQS8 1478 aa23.61■■□□□ 1.37
LETM1-207ENST00000512669 C3P01024 1663 aa23.6■■□□□ 1.37
LETM1-207ENST00000512669 STRCQ7RTU9 1775 aa23.6■■□□□ 1.37
LETM1-207ENST00000512669 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
LETM1-207ENST00000512669 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
LETM1-207ENST00000512669 KIDINS220Q9ULH0 1771 aa23.57■■□□□ 1.36
LETM1-207ENST00000512669 PTPRTO14522 1441 aa23.56■■□□□ 1.36
LETM1-207ENST00000512669 SAMD9LQ8IVG5 1584 aa23.52■■□□□ 1.36
LETM1-207ENST00000512669 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
LETM1-207ENST00000512669 NPATQ14207 1427 aa23.5■■□□□ 1.35
LETM1-207ENST00000512669 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
LETM1-207ENST00000512669 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
LETM1-207ENST00000512669 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
LETM1-207ENST00000512669 GPATCH8Q9UKJ3 1502 aaKnown RBP23.47■■□□□ 1.35
LETM1-207ENST00000512669 SPAG9O60271 1321 aaKnown RBP23.46■■□□□ 1.35
LETM1-207ENST00000512669 NCOA1Q15788 1441 aa23.45■■□□□ 1.34
LETM1-207ENST00000512669 ZNF777Q9ULD5 760 aaPredicted RBP23.45■■□□□ 1.34
LETM1-207ENST00000512669 IQSEC2Q5JU85 1478 aa23.44■■□□□ 1.34
LETM1-207ENST00000512669 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
LETM1-207ENST00000512669 INO80Q9ULG1 1556 aaPredicted RBP23.42■■□□□ 1.34
LETM1-207ENST00000512669 PLXNC1O60486 1568 aa23.41■■□□□ 1.34
LETM1-207ENST00000512669 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
LETM1-207ENST00000512669 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
LETM1-207ENST00000512669 ZMYM3Q14202 1370 aa23.4■■□□□ 1.34
LETM1-207ENST00000512669 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
LETM1-207ENST00000512669 SUPT6HQ7KZ85 1726 aaKnown RBP23.4■■□□□ 1.34
LETM1-207ENST00000512669 A2MP01023 1474 aa23.38■■□□□ 1.33
LETM1-207ENST00000512669 LTBP4Q8N2S1 1624 aa23.38■■□□□ 1.33
LETM1-207ENST00000512669 HNRNPMP52272 730 aaKnown RBP eCLIP23.38■■□□□ 1.33
LETM1-207ENST00000512669 CEP162Q5TB80 1403 aa23.38■■□□□ 1.33
LETM1-207ENST00000512669 CAMSAP1Q5T5Y3 1602 aa23.37■■□□□ 1.33
LETM1-207ENST00000512669 MTUS2Q5JR59 1369 aa23.37■■□□□ 1.33
LETM1-207ENST00000512669 ZNF142P52746 1687 aaPredicted RBP23.35■■□□□ 1.33
LETM1-207ENST00000512669 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
LETM1-207ENST00000512669 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
LETM1-207ENST00000512669 ADGBQ8N7X0 1667 aa23.35■■□□□ 1.33
LETM1-207ENST00000512669 PLA2R1Q13018 1463 aa23.33■■□□□ 1.33
LETM1-207ENST00000512669 DISP3Q9P2K9 1392 aa23.33■■□□□ 1.33
LETM1-207ENST00000512669 MYO3AQ8NEV4 1616 aa23.32■■□□□ 1.32
LETM1-207ENST00000512669 EHBP1L1Q8N3D4 1523 aa23.3■■□□□ 1.32
LETM1-207ENST00000512669 PKD2Q13563 968 aa23.3■■□□□ 1.32
LETM1-207ENST00000512669 PTPRKQ15262 1439 aa23.29■■□□□ 1.32
LETM1-207ENST00000512669 CEP170BQ9Y4F5 1589 aaPredicted RBP23.29■■□□□ 1.32
LETM1-207ENST00000512669 TIAM1Q13009 1591 aa23.28■■□□□ 1.32
LETM1-207ENST00000512669 RTEL1-TNFRSF6BF6WH68 1400 aa23.27■■□□□ 1.32
LETM1-207ENST00000512669 GGT6Q6P531 493 aa23.26■■□□□ 1.31
LETM1-207ENST00000512669 SPATA31D1Q6ZQQ2 1576 aa23.25■■□□□ 1.31
LETM1-207ENST00000512669 TCOF1Q13428 1488 aaKnown RBP23.24■■□□□ 1.31
LETM1-207ENST00000512669 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
LETM1-207ENST00000512669 FAM135AQ9P2D6 1515 aa23.23■■□□□ 1.31
LETM1-207ENST00000512669 NCKAP5LQ9HCH0 1330 aa23.23■■□□□ 1.31
LETM1-207ENST00000512669 A2ML1A8K2U0 1454 aa23.2■■□□□ 1.3
LETM1-207ENST00000512669 DHX29Q7Z478 1369 aaKnown RBP23.2■■□□□ 1.3
LETM1-207ENST00000512669 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
LETM1-207ENST00000512669 SOCS7O14512 581 aa23.18■■□□□ 1.3
LETM1-207ENST00000512669 ZNF644Q9H582 1327 aaPredicted RBP23.17■■□□□ 1.3
LETM1-207ENST00000512669 RSPH4AQ5TD94 716 aa23.17■■□□□ 1.3
LETM1-207ENST00000512669 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms