RNA–Protein interactions for RNA: ENST00000512374.1

SLC1A3-211, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best)

Gene SLC1A3, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-211ENST00000512374 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
SLC1A3-211ENST00000512374 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
SLC1A3-211ENST00000512374 PLEKHD1A6NEE1 506 aa16.19■□□□□ 0.18
SLC1A3-211ENST00000512374 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
SLC1A3-211ENST00000512374 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
SLC1A3-211ENST00000512374 ILDR1Q86SU0 546 aaPredicted RBP16.15■□□□□ 0.18
SLC1A3-211ENST00000512374 FHOD3Q2V2M9 1422 aa16.14■□□□□ 0.17
SLC1A3-211ENST00000512374 MAGI2Q86UL8 1455 aa16.14■□□□□ 0.17
SLC1A3-211ENST00000512374 CFAP74Q9C0B2 1584 aa16.13■□□□□ 0.17
SLC1A3-211ENST00000512374 ADAMTSL3P82987 1691 aa16.13■□□□□ 0.17
SLC1A3-211ENST00000512374 P3H3Q8IVL6 736 aa16.11■□□□□ 0.17
SLC1A3-211ENST00000512374 KIF21BO75037 1637 aa16.11■□□□□ 0.17
SLC1A3-211ENST00000512374 DENND4BO75064 1496 aaPredicted RBP16.1■□□□□ 0.17
SLC1A3-211ENST00000512374 PTPRMP28827 1452 aa16.1■□□□□ 0.17
SLC1A3-211ENST00000512374 POGZQ7Z3K3 1410 aa16.09■□□□□ 0.17
SLC1A3-211ENST00000512374 RAPGEF3O95398 923 aa16.08■□□□□ 0.16
SLC1A3-211ENST00000512374 AKNAQ7Z591 1439 aa16.08■□□□□ 0.16
SLC1A3-211ENST00000512374 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
SLC1A3-211ENST00000512374 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
SLC1A3-211ENST00000512374 FANCAO15360 1455 aa16.07■□□□□ 0.16
SLC1A3-211ENST00000512374 ZMYM4Q5VZL5 1548 aa16.07■□□□□ 0.16
SLC1A3-211ENST00000512374 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
SLC1A3-211ENST00000512374 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
SLC1A3-211ENST00000512374 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
SLC1A3-211ENST00000512374 FRMPD1Q5SYB0 1578 aa16.04■□□□□ 0.16
SLC1A3-211ENST00000512374 ARHGEF40Q8TER5 1519 aa16.04■□□□□ 0.16
SLC1A3-211ENST00000512374 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
SLC1A3-211ENST00000512374 PLCH2O75038 1416 aa16.03■□□□□ 0.16
SLC1A3-211ENST00000512374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
SLC1A3-211ENST00000512374 RICTORQ6R327 1708 aa16.02■□□□□ 0.16
SLC1A3-211ENST00000512374 FBXO41Q8TF61 875 aa16.02■□□□□ 0.16
SLC1A3-211ENST00000512374 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
SLC1A3-211ENST00000512374 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
SLC1A3-211ENST00000512374 PCF11O94913 1555 aaKnown RBP15.99■□□□□ 0.15
SLC1A3-211ENST00000512374 ARID4BQ4LE39 1312 aaPredicted RBP15.98■□□□□ 0.15
SLC1A3-211ENST00000512374 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
SLC1A3-211ENST00000512374 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
SLC1A3-211ENST00000512374 HECW1Q76N89 1606 aa15.94■□□□□ 0.14
SLC1A3-211ENST00000512374 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
SLC1A3-211ENST00000512374 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
SLC1A3-211ENST00000512374 ATP10AO60312 1499 aa15.93■□□□□ 0.14
SLC1A3-211ENST00000512374 SCAPERQ9BY12 1400 aa15.93■□□□□ 0.14
SLC1A3-211ENST00000512374 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
SLC1A3-211ENST00000512374 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
SLC1A3-211ENST00000512374 CLIP1P30622 1438 aa15.91■□□□□ 0.14
SLC1A3-211ENST00000512374 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
SLC1A3-211ENST00000512374 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
SLC1A3-211ENST00000512374 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
SLC1A3-211ENST00000512374 REREQ9P2R6 1566 aa15.89■□□□□ 0.13
SLC1A3-211ENST00000512374 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
SLC1A3-211ENST00000512374 SETD1BQ9UPS6 1966 aaKnown RBP15.88■□□□□ 0.13
SLC1A3-211ENST00000512374 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
SLC1A3-211ENST00000512374 YEATS2Q9ULM3 1422 aa15.87■□□□□ 0.13
SLC1A3-211ENST00000512374 CHRDL2Q6WN34 429 aa15.87■□□□□ 0.13
SLC1A3-211ENST00000512374 ARHGEF12Q9NZN5 1544 aa15.87■□□□□ 0.13
SLC1A3-211ENST00000512374 KIF14Q15058 1648 aa15.86■□□□□ 0.13
SLC1A3-211ENST00000512374 CDK13Q14004 1512 aaKnown RBP15.86■□□□□ 0.13
SLC1A3-211ENST00000512374 KDM5CP41229 1560 aa15.86■□□□□ 0.13
SLC1A3-211ENST00000512374 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
SLC1A3-211ENST00000512374 MLH3Q9UHC1 1453 aa15.85■□□□□ 0.13
SLC1A3-211ENST00000512374 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
SLC1A3-211ENST00000512374 RIMS1Q86UR5 1692 aaKnown RBP15.85■□□□□ 0.13
SLC1A3-211ENST00000512374 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.12
SLC1A3-211ENST00000512374 AGLP35573 1532 aa15.83■□□□□ 0.12
SLC1A3-211ENST00000512374 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
SLC1A3-211ENST00000512374 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
SLC1A3-211ENST00000512374 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
SLC1A3-211ENST00000512374 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
SLC1A3-211ENST00000512374 PREX1Q8TCU6 1659 aa15.76■□□□□ 0.11
SLC1A3-211ENST00000512374 AFAP1Q8N556 730 aa15.75■□□□□ 0.11
SLC1A3-211ENST00000512374 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
SLC1A3-211ENST00000512374 SIGLEC1Q9BZZ2 1709 aa15.74■□□□□ 0.11
SLC1A3-211ENST00000512374 FYCO1Q9BQS8 1478 aa15.74■□□□□ 0.11
SLC1A3-211ENST00000512374 CERKQ8TCT0 537 aa15.74■□□□□ 0.11
SLC1A3-211ENST00000512374 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
SLC1A3-211ENST00000512374 PREX2Q70Z35 1606 aa15.73■□□□□ 0.11
SLC1A3-211ENST00000512374 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
SLC1A3-211ENST00000512374 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
SLC1A3-211ENST00000512374 CDC42BPBQ9Y5S2 1711 aa15.72■□□□□ 0.11
SLC1A3-211ENST00000512374 DIP2CQ9Y2E4 1556 aa15.72■□□□□ 0.11
SLC1A3-211ENST00000512374 PTPRTO14522 1441 aa15.72■□□□□ 0.11
SLC1A3-211ENST00000512374 ABCC1P33527 1531 aa15.72■□□□□ 0.11
SLC1A3-211ENST00000512374 TRAPPC8Q9Y2L5 1435 aa15.71■□□□□ 0.11
SLC1A3-211ENST00000512374 HSPA2P54652 639 aa15.71■□□□□ 0.11
SLC1A3-211ENST00000512374 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
SLC1A3-211ENST00000512374 NPATQ14207 1427 aa15.7■□□□□ 0.1
SLC1A3-211ENST00000512374 MLECQ14165 292 aa15.7■□□□□ 0.1
SLC1A3-211ENST00000512374 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
SLC1A3-211ENST00000512374 IQSEC2Q5JU85 1478 aa15.68■□□□□ 0.1
SLC1A3-211ENST00000512374 LRRIQ1Q96JM4 1722 aa15.66■□□□□ 0.1
SLC1A3-211ENST00000512374 ITSN2Q9NZM3 1697 aa15.65■□□□□ 0.1
SLC1A3-211ENST00000512374 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
SLC1A3-211ENST00000512374 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
SLC1A3-211ENST00000512374 MROH2AA6NES4 1674 aa15.64■□□□□ 0.09
SLC1A3-211ENST00000512374 KIDINS220Q9ULH0 1771 aa15.64■□□□□ 0.09
SLC1A3-211ENST00000512374 GPATCH8Q9UKJ3 1502 aaKnown RBP15.63■□□□□ 0.09
SLC1A3-211ENST00000512374 CDC42BPAQ5VT25 1732 aa15.63■□□□□ 0.09
SLC1A3-211ENST00000512374 RSPH4AQ5TD94 716 aa15.63■□□□□ 0.09
SLC1A3-211ENST00000512374 SPAG9O60271 1321 aaKnown RBP15.62■□□□□ 0.09
SLC1A3-211ENST00000512374 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms