RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
HTT-209ENST00000512068 CCDC18Q5T9S5 1454 aa12.32□□□□□ -0.44
HTT-209ENST00000512068 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
HTT-209ENST00000512068 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
HTT-209ENST00000512068 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
HTT-209ENST00000512068 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
HTT-209ENST00000512068 LRRC9Q6ZRR7 1453 aa12.28□□□□□ -0.44
HTT-209ENST00000512068 PRG4Q92954 1404 aaPredicted RBP12.28□□□□□ -0.44
HTT-209ENST00000512068 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.45
HTT-209ENST00000512068 MTUS2Q5JR59 1369 aa12.27□□□□□ -0.45
HTT-209ENST00000512068 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
HTT-209ENST00000512068 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
HTT-209ENST00000512068 SPOCK2Q92563 424 aa12.25□□□□□ -0.45
HTT-209ENST00000512068 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
HTT-209ENST00000512068 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
HTT-209ENST00000512068 LRRIQ1Q96JM4 1722 aa12.25□□□□□ -0.45
HTT-209ENST00000512068 SUPT6HQ7KZ85 1726 aaKnown RBP12.23□□□□□ -0.45
HTT-209ENST00000512068 EPRSP07814 1512 aaKnown RBP12.23□□□□□ -0.45
HTT-209ENST00000512068 CDK11AQ9UQ88 783 aaPredicted RBP12.22□□□□□ -0.45
HTT-209ENST00000512068 PTPRGP23470 1445 aa12.21□□□□□ -0.45
HTT-209ENST00000512068 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
HTT-209ENST00000512068 ARID3CA6NKF2 412 aa12.19□□□□□ -0.46
HTT-209ENST00000512068 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
HTT-209ENST00000512068 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
HTT-209ENST00000512068 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
HTT-209ENST00000512068 ABCA8O94911 1581 aa12.18□□□□□ -0.46
HTT-209ENST00000512068 RRBP1Q9P2E9 1410 aaKnown RBP12.17□□□□□ -0.46
HTT-209ENST00000512068 CCNB3Q8WWL7 1395 aa12.17□□□□□ -0.46
HTT-209ENST00000512068 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
HTT-209ENST00000512068 UACAQ9BZF9 1416 aa12.14□□□□□ -0.47
HTT-209ENST00000512068 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
HTT-209ENST00000512068 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
HTT-209ENST00000512068 ERCC6L2Q5T890 1561 aa12.13□□□□□ -0.47
HTT-209ENST00000512068 PKD2Q13563 968 aa12.12□□□□□ -0.47
HTT-209ENST00000512068 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
HTT-209ENST00000512068 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
HTT-209ENST00000512068 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
HTT-209ENST00000512068 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
HTT-209ENST00000512068 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
HTT-209ENST00000512068 MYOM3Q5VTT5 1437 aa12.11□□□□□ -0.47
HTT-209ENST00000512068 FGD6Q6ZV73 1430 aa12.1□□□□□ -0.47
HTT-209ENST00000512068 KIF14Q15058 1648 aa12.09□□□□□ -0.47
HTT-209ENST00000512068 ITSN2Q9NZM3 1697 aa12.09□□□□□ -0.47
HTT-209ENST00000512068 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
HTT-209ENST00000512068 ITGAEP38570 1179 aa12.08□□□□□ -0.48
HTT-209ENST00000512068 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.487e-6■■□□□ 13.4
HTT-209ENST00000512068 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
HTT-209ENST00000512068 ATP10BO94823 1461 aa12.08□□□□□ -0.48
HTT-209ENST00000512068 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
HTT-209ENST00000512068 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
HTT-209ENST00000512068 UHRF1BP1LA0JNW5 1464 aa12.07□□□□□ -0.48
HTT-209ENST00000512068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
HTT-209ENST00000512068 ZEB1P37275 1124 aaPredicted RBP12.06□□□□□ -0.48
HTT-209ENST00000512068 HRCP23327 699 aa12.05□□□□□ -0.48
HTT-209ENST00000512068 NUBP1P53384 320 aa12.05□□□□□ -0.48
HTT-209ENST00000512068 CCER1Q8TC90 406 aaPredicted RBP12.05□□□□□ -0.48
HTT-209ENST00000512068 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
HTT-209ENST00000512068 ZCCHC11Q5TAX3 1644 aaKnown RBP12.04□□□□□ -0.48
HTT-209ENST00000512068 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
HTT-209ENST00000512068 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
HTT-209ENST00000512068 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
HTT-209ENST00000512068 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
HTT-209ENST00000512068 KDM5BQ9UGL1 1544 aa12□□□□□ -0.49
HTT-209ENST00000512068 CFDP1Q9UEE9 299 aaPredicted RBP11.99□□□□□ -0.49
HTT-209ENST00000512068 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
HTT-209ENST00000512068 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
HTT-209ENST00000512068 FARP1Q9Y4F1 1045 aaPredicted RBP11.98□□□□□ -0.49
HTT-209ENST00000512068 CDC42BPAQ5VT25 1732 aa11.97□□□□□ -0.49
HTT-209ENST00000512068 GSE1Q14687 1217 aa11.97□□□□□ -0.49
HTT-209ENST00000512068 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
HTT-209ENST00000512068 MYO5CQ9NQX4 1742 aa11.96□□□□□ -0.49
HTT-209ENST00000512068 GPATCH8Q9UKJ3 1502 aaKnown RBP11.96□□□□□ -0.5
HTT-209ENST00000512068 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
HTT-209ENST00000512068 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
HTT-209ENST00000512068 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
HTT-209ENST00000512068 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
HTT-209ENST00000512068 PREX2Q70Z35 1606 aa11.94□□□□□ -0.5
HTT-209ENST00000512068 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
HTT-209ENST00000512068 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
HTT-209ENST00000512068 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
HTT-209ENST00000512068 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
HTT-209ENST00000512068 WDR7Q9Y4E6 1490 aa11.93□□□□□ -0.5
HTT-209ENST00000512068 ARHGAP5Q13017 1502 aa11.92□□□□□ -0.5
HTT-209ENST00000512068 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
HTT-209ENST00000512068 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
HTT-209ENST00000512068 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
HTT-209ENST00000512068 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
HTT-209ENST00000512068 TTC37Q6PGP7 1564 aa11.92□□□□□ -0.5
HTT-209ENST00000512068 RAB3GAP2Q9H2M9 1393 aa11.92□□□□□ -0.5
HTT-209ENST00000512068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
HTT-209ENST00000512068 DAPK1P53355 1430 aa11.91□□□□□ -0.5
HTT-209ENST00000512068 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
HTT-209ENST00000512068 GCC2Q8IWJ2 1684 aa11.9□□□□□ -0.5
HTT-209ENST00000512068 ADGBQ8N7X0 1667 aa11.9□□□□□ -0.5
HTT-209ENST00000512068 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
HTT-209ENST00000512068 CROCC2H7BZ55 1655 aa11.89□□□□□ -0.51
HTT-209ENST00000512068 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
HTT-209ENST00000512068 ASXL2Q76L83 1435 aa11.88□□□□□ -0.51
HTT-209ENST00000512068 AKNAQ7Z591 1439 aa11.88□□□□□ -0.51
HTT-209ENST00000512068 CHIC2Q9UKJ5 165 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms