RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 ATP1B4Q9UN42 357 aaPredicted RBP30.94■■■□□ 2.54
SMAD1-211ENST00000512019 ZMYM4Q5VZL5 1548 aa30.93■■■□□ 2.54
SMAD1-211ENST00000512019 RIMS1Q86UR5 1692 aaKnown RBP30.91■■■□□ 2.54
SMAD1-211ENST00000512019 MYO5CQ9NQX4 1742 aa30.91■■■□□ 2.54
SMAD1-211ENST00000512019 KIF14Q15058 1648 aa30.89■■■□□ 2.54
SMAD1-211ENST00000512019 PLCH2O75038 1416 aa30.88■■■□□ 2.53
SMAD1-211ENST00000512019 YEATS2Q9ULM3 1422 aa30.88■■■□□ 2.53
SMAD1-211ENST00000512019 CCDC18Q5T9S5 1454 aa30.88■■■□□ 2.53
SMAD1-211ENST00000512019 ZFYVE16Q7Z3T8 1539 aa30.88■■■□□ 2.53
SMAD1-211ENST00000512019 SCAPERQ9BY12 1400 aa30.82■■■□□ 2.52
SMAD1-211ENST00000512019 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
SMAD1-211ENST00000512019 MAGI2Q86UL8 1455 aa30.78■■■□□ 2.52
SMAD1-211ENST00000512019 TROQ12816 1431 aaPredicted RBP30.76■■■□□ 2.51
SMAD1-211ENST00000512019 CDK11AQ9UQ88 783 aaPredicted RBP30.75■■■□□ 2.51
SMAD1-211ENST00000512019 FER1L4A9Z1Z3 1794 aa30.73■■■□□ 2.51
SMAD1-211ENST00000512019 LMTK3Q96Q04 1460 aa30.72■■■□□ 2.51
SMAD1-211ENST00000512019 EFCAB2Q5VUJ9 269 aa30.72■■■□□ 2.51
SMAD1-211ENST00000512019 CDC42BPBQ9Y5S2 1711 aa30.71■■■□□ 2.51
SMAD1-211ENST00000512019 ARHGAP5Q13017 1502 aa30.7■■■□□ 2.51
SMAD1-211ENST00000512019 MLECQ14165 292 aa30.69■■■□□ 2.5
SMAD1-211ENST00000512019 PLPPR3Q6T4P5 718 aa30.69■■■□□ 2.5
SMAD1-211ENST00000512019 TIAM1Q13009 1591 aa30.69■■■□□ 2.5
SMAD1-211ENST00000512019 MAP3K1Q13233 1512 aa30.68■■■□□ 2.5
SMAD1-211ENST00000512019 APLP2Q06481 763 aa30.67■■■□□ 2.5
SMAD1-211ENST00000512019 ATP10AO60312 1499 aa30.64■■■□□ 2.5
SMAD1-211ENST00000512019 C9orf84Q5VXU9 1444 aa30.63■■■□□ 2.49
SMAD1-211ENST00000512019 KDM5CP41229 1560 aa30.62■■■□□ 2.49
SMAD1-211ENST00000512019 PREX2Q70Z35 1606 aa30.62■■■□□ 2.49
SMAD1-211ENST00000512019 ZNF518AQ6AHZ1 1483 aa30.61■■■□□ 2.49
SMAD1-211ENST00000512019 ARHGEF12Q9NZN5 1544 aa30.59■■■□□ 2.49
SMAD1-211ENST00000512019 AFAP1Q8N556 730 aa30.59■■■□□ 2.49
SMAD1-211ENST00000512019 CDC42BPAQ5VT25 1732 aa30.58■■■□□ 2.49
SMAD1-211ENST00000512019 EHBP1L1Q8N3D4 1523 aa30.57■■■□□ 2.49
SMAD1-211ENST00000512019 MTUS2Q5JR59 1369 aa30.57■■■□□ 2.48
SMAD1-211ENST00000512019 HSPA2P54652 639 aa30.56■■■□□ 2.48
SMAD1-211ENST00000512019 ITSN2Q9NZM3 1697 aa30.55■■■□□ 2.48
SMAD1-211ENST00000512019 DIP2CQ9Y2E4 1556 aa30.55■■■□□ 2.48
SMAD1-211ENST00000512019 ABCA6Q8N139 1617 aa30.54■■■□□ 2.48
SMAD1-211ENST00000512019 LRRC9Q6ZRR7 1453 aa30.53■■■□□ 2.48
SMAD1-211ENST00000512019 ABCC1P33527 1531 aa30.52■■■□□ 2.48
SMAD1-211ENST00000512019 TRAPPC8Q9Y2L5 1435 aa30.48■■■□□ 2.47
SMAD1-211ENST00000512019 MYT1LQ9UL68 1186 aa30.48■■■□□ 2.47
SMAD1-211ENST00000512019 PREX1Q8TCU6 1659 aa30.46■■■□□ 2.47
SMAD1-211ENST00000512019 REREQ9P2R6 1566 aa30.45■■■□□ 2.47
SMAD1-211ENST00000512019 MLH3Q9UHC1 1453 aa30.45■■■□□ 2.47
SMAD1-211ENST00000512019 FBXO41Q8TF61 875 aa30.45■■■□□ 2.47
SMAD1-211ENST00000512019 CEBPAP49715 358 aaPredicted RBP30.44■■■□□ 2.46
SMAD1-211ENST00000512019 KIDINS220Q9ULH0 1771 aa30.43■■■□□ 2.46
SMAD1-211ENST00000512019 KANK4Q5T7N3 995 aaPredicted RBP30.43■■■□□ 2.46
SMAD1-211ENST00000512019 SUPT6HQ7KZ85 1726 aaKnown RBP30.43■■■□□ 2.46
SMAD1-211ENST00000512019 SAMD9LQ8IVG5 1584 aa30.4■■■□□ 2.46
SMAD1-211ENST00000512019 C3P01024 1663 aa30.36■■■□□ 2.45
SMAD1-211ENST00000512019 NCOA2Q15596 1464 aa30.35■■■□□ 2.45
SMAD1-211ENST00000512019 AGLP35573 1532 aa30.34■■■□□ 2.45
SMAD1-211ENST00000512019 GPATCH8Q9UKJ3 1502 aaKnown RBP30.34■■■□□ 2.45
SMAD1-211ENST00000512019 SYCP2Q9BX26 1530 aa30.33■■■□□ 2.45
SMAD1-211ENST00000512019 ZNF777Q9ULD5 760 aaPredicted RBP30.33■■■□□ 2.45
SMAD1-211ENST00000512019 SETD1BQ9UPS6 1966 aaKnown RBP30.3■■■□□ 2.44
SMAD1-211ENST00000512019 STRCQ7RTU9 1775 aa30.29■■■□□ 2.44
SMAD1-211ENST00000512019 CCNB3Q8WWL7 1395 aa30.28■■■□□ 2.44
SMAD1-211ENST00000512019 HNRNPMP52272 730 aaKnown RBP eCLIP30.24■■■□□ 2.43
SMAD1-211ENST00000512019 UHRF1BP1Q6BDS2 1440 aa30.23■■■□□ 2.43
SMAD1-211ENST00000512019 PPARGC1BQ86YN6 1023 aaKnown RBP30.21■■■□□ 2.43
SMAD1-211ENST00000512019 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.43
SMAD1-211ENST00000512019 ATP7AQ04656 1500 aa30.2■■■□□ 2.42
SMAD1-211ENST00000512019 SPAG9O60271 1321 aaKnown RBP30.19■■■□□ 2.42
SMAD1-211ENST00000512019 CFDP1Q9UEE9 299 aaPredicted RBP30.18■■■□□ 2.42
SMAD1-211ENST00000512019 MYOM3Q5VTT5 1437 aa30.17■■■□□ 2.42
SMAD1-211ENST00000512019 ESF1Q9H501 851 aaKnown RBP30.17■■■□□ 2.42
SMAD1-211ENST00000512019 KIAA1107Q9UPP5 1409 aa30.16■■■□□ 2.42
SMAD1-211ENST00000512019 MROH2AA6NES4 1674 aa30.15■■■□□ 2.42
SMAD1-211ENST00000512019 PLEKHH2Q8IVE3 1493 aa30.15■■■□□ 2.42
SMAD1-211ENST00000512019 CERKQ8TCT0 537 aa30.15■■■□□ 2.42
SMAD1-211ENST00000512019 PLXNC1O60486 1568 aa30.13■■■□□ 2.41
SMAD1-211ENST00000512019 CNTLNQ9NXG0 1405 aa30.13■■■□□ 2.41
SMAD1-211ENST00000512019 CLTCQ00610 1675 aaKnown RBP30.12■■■□□ 2.41
SMAD1-211ENST00000512019 ZNF644Q9H582 1327 aaPredicted RBP30.1■■■□□ 2.41
SMAD1-211ENST00000512019 MIA2Q96PC5 1412 aa30.1■■■□□ 2.41
SMAD1-211ENST00000512019 A2MP01023 1474 aa30.08■■■□□ 2.41
SMAD1-211ENST00000512019 ADGBQ8N7X0 1667 aa30.07■■■□□ 2.41
SMAD1-211ENST00000512019 FGD6Q6ZV73 1430 aa30.06■■■□□ 2.4
SMAD1-211ENST00000512019 DMRT2Q9Y5R5 561 aa30.03■■■□□ 2.4
SMAD1-211ENST00000512019 MBD5Q9P267 1494 aa30.03■■■□□ 2.4
SMAD1-211ENST00000512019 ZMYM3Q14202 1370 aa30.03■■■□□ 2.4
SMAD1-211ENST00000512019 CAMSAP2Q08AD1 1489 aa30■■■□□ 2.39
SMAD1-211ENST00000512019 PTPN23Q9H3S7 1636 aa30■■■□□ 2.39
SMAD1-211ENST00000512019 NPATQ14207 1427 aa29.99■■■□□ 2.39
SMAD1-211ENST00000512019 PTPRTO14522 1441 aa29.98■■■□□ 2.39
SMAD1-211ENST00000512019 NCOA1Q15788 1441 aa29.96■■■□□ 2.39
SMAD1-211ENST00000512019 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
SMAD1-211ENST00000512019 MYO3AQ8NEV4 1616 aa29.96■■■□□ 2.39
SMAD1-211ENST00000512019 GGT6Q6P531 493 aa29.96■■■□□ 2.39
SMAD1-211ENST00000512019 TCOF1Q13428 1488 aaKnown RBP29.95■■■□□ 2.39
SMAD1-211ENST00000512019 ZNF142P52746 1687 aaPredicted RBP29.94■■■□□ 2.38
SMAD1-211ENST00000512019 PTPRKQ15262 1439 aa29.91■■■□□ 2.38
SMAD1-211ENST00000512019 RRBP1Q9P2E9 1410 aaKnown RBP29.91■■■□□ 2.38
SMAD1-211ENST00000512019 RTEL1-TNFRSF6BF6WH68 1400 aa29.9■■■□□ 2.38
SMAD1-211ENST00000512019 LTBP4Q8N2S1 1624 aa29.89■■■□□ 2.38
SMAD1-211ENST00000512019 CCDC141Q6ZP82 1450 aa29.87■■■□□ 2.37
SMAD1-211ENST00000512019 CEP170BQ9Y4F5 1589 aaPredicted RBP29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms