RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	BCORL1	Q5H9F3	1711 aa		13.96	□□□□□ -0.17
IFT122-223	ENST00000511498	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.95	□□□□□ -0.18
IFT122-223	ENST00000511498	FGD6	Q6ZV73	1430 aa		13.95	□□□□□ -0.18
IFT122-223	ENST00000511498	UACA	Q9BZF9	1416 aa		13.94	□□□□□ -0.18
IFT122-223	ENST00000511498	NCOA2	Q15596	1464 aa		13.93	□□□□□ -0.18
IFT122-223	ENST00000511498	HSPA2	P54652	639 aa		13.93	□□□□□ -0.18
IFT122-223	ENST00000511498	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.93	□□□□□ -0.18
IFT122-223	ENST00000511498	MYOM3	Q5VTT5	1437 aa		13.92	□□□□□ -0.18
IFT122-223	ENST00000511498	DHX57	Q6P158	1386 aa	Known RBP	13.92	□□□□□ -0.18
IFT122-223	ENST00000511498	WDR7	Q9Y4E6	1490 aa		13.92	□□□□□ -0.18
IFT122-223	ENST00000511498	ARAP3	Q8WWN8	1544 aa		13.91	□□□□□ -0.18
IFT122-223	ENST00000511498	PTPN23	Q9H3S7	1636 aa		13.9	□□□□□ -0.19
IFT122-223	ENST00000511498	CARMIL2	Q6F5E8	1435 aa		13.9	□□□□□ -0.19
IFT122-223	ENST00000511498	CD109	Q6YHK3	1445 aa		13.89	□□□□□ -0.19
IFT122-223	ENST00000511498	SETD5	Q9C0A6	1442 aa		13.89	□□□□□ -0.19
IFT122-223	ENST00000511498	TCOF1	Q13428	1488 aa	Known RBP	13.88	□□□□□ -0.19
IFT122-223	ENST00000511498	RIMS1	Q86UR5	1692 aa	Known RBP	13.87	□□□□□ -0.19
IFT122-223	ENST00000511498	ITSN2	Q9NZM3	1697 aa		13.87	□□□□□ -0.19
IFT122-223	ENST00000511498	CDK13	Q14004	1512 aa	Known RBP	13.86	□□□□□ -0.19
IFT122-223	ENST00000511498	GCC2	Q8IWJ2	1684 aa		13.86	□□□□□ -0.19
IFT122-223	ENST00000511498	RAB3GAP2	Q9H2M9	1393 aa		13.85	□□□□□ -0.19
IFT122-223	ENST00000511498	MIA2	Q96PC5	1412 aa		13.85	□□□□□ -0.19
IFT122-223	ENST00000511498	NUP153	P49790	1475 aa	Known RBP	13.85	□□□□□ -0.19
IFT122-223	ENST00000511498	FOXD1	Q16676	465 aa		13.84	□□□□□ -0.19
IFT122-223	ENST00000511498	PLPPR3	Q6T4P5	718 aa		13.84	□□□□□ -0.19
IFT122-223	ENST00000511498	FAM50A	Q14320	339 aa	Known RBP	13.83	□□□□□ -0.2
IFT122-223	ENST00000511498	AKNA	Q7Z591	1439 aa		13.82	□□□□□ -0.2
IFT122-223	ENST00000511498	ABCA8	O94911	1581 aa		13.81	□□□□□ -0.2
IFT122-223	ENST00000511498	HFM1	A2PYH4	1435 aa		13.81	□□□□□ -0.2
IFT122-223	ENST00000511498	IQSEC2	Q5JU85	1478 aa		13.8	□□□□□ -0.2
IFT122-223	ENST00000511498	STRC	Q7RTU9	1775 aa		13.78	□□□□□ -0.2
IFT122-223	ENST00000511498	ITGAE	P38570	1179 aa		13.78	□□□□□ -0.2
IFT122-223	ENST00000511498	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.78	□□□□□ -0.2
IFT122-223	ENST00000511498	FRMPD1	Q5SYB0	1578 aa		13.78	□□□□□ -0.2
IFT122-223	ENST00000511498	YEATS2	Q9ULM3	1422 aa		13.77	□□□□□ -0.21
IFT122-223	ENST00000511498	DNMT1	P26358	1616 aa	Known RBP	13.76	□□□□□ -0.21
IFT122-223	ENST00000511498	LTBP4	Q8N2S1	1624 aa		13.76	□□□□□ -0.21
IFT122-223	ENST00000511498	TRO	Q12816	1431 aa	Predicted RBP	13.76	□□□□□ -0.21
IFT122-223	ENST00000511498	ARHGEF40	Q8TER5	1519 aa		13.75	□□□□□ -0.21
IFT122-223	ENST00000511498	ACIN1	Q9UKV3	1341 aa	Known RBP	13.75	□□□□□ -0.21
IFT122-223	ENST00000511498	KIF14	Q15058	1648 aa		13.75	□□□□□ -0.21
IFT122-223	ENST00000511498	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.74	□□□□□ -0.21
IFT122-223	ENST00000511498	ADGB	Q8N7X0	1667 aa		13.74	□□□□□ -0.21
IFT122-223	ENST00000511498	TTC37	Q6PGP7	1564 aa		13.74	□□□□□ -0.21
IFT122-223	ENST00000511498	CROCC2	H7BZ55	1655 aa		13.73	□□□□□ -0.21
IFT122-223	ENST00000511498	PREX1	Q8TCU6	1659 aa		13.73	□□□□□ -0.21
IFT122-223	ENST00000511498	NAIP	Q13075	1403 aa		13.71	□□□□□ -0.22
IFT122-223	ENST00000511498	MED1	Q15648	1581 aa	Predicted RBP	13.71	□□□□□ -0.22
IFT122-223	ENST00000511498	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.7	□□□□□ -0.22
IFT122-223	ENST00000511498	DMRT2	Q9Y5R5	561 aa		13.7	□□□□□ -0.22
IFT122-223	ENST00000511498	PTPRK	Q15262	1439 aa		13.69	□□□□□ -0.22
IFT122-223	ENST00000511498	CDC42BPA	Q5VT25	1732 aa		13.69	□□□□□ -0.22
IFT122-223	ENST00000511498	PTPRT	O14522	1441 aa		13.68	□□□□□ -0.22
IFT122-223	ENST00000511498	RAPGEF3	O95398	923 aa		13.68	□□□□□ -0.22
IFT122-223	ENST00000511498	TIMELESS	Q9UNS1	1208 aa		13.68	□□□□□ -0.22
IFT122-223	ENST00000511498	ROCK1	Q13464	1354 aa		13.68	□□□□□ -0.22
IFT122-223	ENST00000511498	NEO1	Q92859	1461 aa		13.67	□□□□□ -0.22
IFT122-223	ENST00000511498	SIGLEC1	Q9BZZ2	1709 aa		13.67	□□□□□ -0.22
IFT122-223	ENST00000511498	ABCA9	Q8IUA7	1624 aa		13.67	□□□□□ -0.22
IFT122-223	ENST00000511498	DAPK1	P53355	1430 aa		13.66	□□□□□ -0.22
IFT122-223	ENST00000511498	DIEXF	Q68CQ4	756 aa	Known RBP	13.66	□□□□□ -0.22
IFT122-223	ENST00000511498	FER1L4	A9Z1Z3	1794 aa		13.66	□□□□□ -0.22
IFT122-223	ENST00000511498	CAMSAP2	Q08AD1	1489 aa		13.65	□□□□□ -0.22
IFT122-223	ENST00000511498	FANCA	O15360	1455 aa		13.64	□□□□□ -0.23
IFT122-223	ENST00000511498	KCNH8	Q96L42	1107 aa		13.64	□□□□□ -0.23
IFT122-223	ENST00000511498	POGZ	Q7Z3K3	1410 aa		13.64	□□□□□ -0.23
IFT122-223	ENST00000511498	ATP10B	O94823	1461 aa		13.63	□□□□□ -0.23
IFT122-223	ENST00000511498	PREX2	Q70Z35	1606 aa		13.63	□□□□□ -0.23
IFT122-223	ENST00000511498	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.63	□□□□□ -0.23
IFT122-223	ENST00000511498	ADGRL2	O95490	1459 aa		13.61	□□□□□ -0.23
IFT122-223	ENST00000511498	SHANK2	Q9UPX8	1470 aa		13.61	□□□□□ -0.23
IFT122-223	ENST00000511498	RICTOR	Q6R327	1708 aa		13.61	□□□□□ -0.23
IFT122-223	ENST00000511498	ABCC5	O15440	1437 aa		13.6	□□□□□ -0.23
IFT122-223	ENST00000511498	ARHGEF5	Q12774	1597 aa		13.6	□□□□□ -0.23
IFT122-223	ENST00000511498	SRCAP	Q6ZRS2	3230 aa		13.59	□□□□□ -0.23
IFT122-223	ENST00000511498	ZMYM4	Q5VZL5	1548 aa		13.59	□□□□□ -0.23
IFT122-223	ENST00000511498	ARHGEF12	Q9NZN5	1544 aa		13.59	□□□□□ -0.23
IFT122-223	ENST00000511498	PLEKHD1	A6NEE1	506 aa		13.58	□□□□□ -0.24
IFT122-223	ENST00000511498	MYO5C	Q9NQX4	1742 aa		13.57	□□□□□ -0.24
IFT122-223	ENST00000511498	ARID3C	A6NKF2	412 aa		13.57	□□□□□ -0.24
IFT122-223	ENST00000511498	CDC42BPB	Q9Y5S2	1711 aa		13.56	□□□□□ -0.24
IFT122-223	ENST00000511498	UHRF1BP1	Q6BDS2	1440 aa		13.56	□□□□□ -0.24
IFT122-223	ENST00000511498	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.55	□□□□□ -0.24
IFT122-223	ENST00000511498	SETD1B	Q9UPS6	1966 aa	Known RBP	13.53	□□□□□ -0.24
IFT122-223	ENST00000511498	ZFYVE16	Q7Z3T8	1539 aa		13.53	□□□□□ -0.24
IFT122-223	ENST00000511498	TONSL	Q96HA7	1378 aa		13.52	□□□□□ -0.25
IFT122-223	ENST00000511498	DENND4B	O75064	1496 aa	Predicted RBP	13.52	□□□□□ -0.25
IFT122-223	ENST00000511498	MAST1	Q9Y2H9	1570 aa		13.51	□□□□□ -0.25
IFT122-223	ENST00000511498	UBAP1L	F5GYI3	381 aa		13.51	□□□□□ -0.25
IFT122-223	ENST00000511498	SAMD9L	Q8IVG5	1584 aa		13.5	□□□□□ -0.25
IFT122-223	ENST00000511498	PLEKHH2	Q8IVE3	1493 aa		13.5	□□□□□ -0.25
IFT122-223	ENST00000511498	NCOA1	Q15788	1441 aa		13.5	□□□□□ -0.25
IFT122-223	ENST00000511498	ANKRD30A	Q9BXX3	1397 aa		13.5	□□□□□ -0.25
IFT122-223	ENST00000511498	RRP7BP	Q9NSQ0	103 aa		13.5	□□□□□ -0.25
IFT122-223	ENST00000511498	MAGI2	Q86UL8	1455 aa		13.49	□□□□□ -0.25
IFT122-223	ENST00000511498	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
IFT122-223	ENST00000511498	KDM5D	Q9BY66	1539 aa		13.49	□□□□□ -0.25
IFT122-223	ENST00000511498	CHIC2	Q9UKJ5	165 aa		13.48	□□□□□ -0.25
IFT122-223	ENST00000511498	CCDC141	Q6ZP82	1450 aa		13.48	□□□□□ -0.25
IFT122-223	ENST00000511498	HSPA1L	P34931	641 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms