RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CERKQ8TCT0 537 aa4.28□□□□□ -1.72
CLOCK-209ENST00000511124 CEP162Q5TB80 1403 aa4.28□□□□□ -1.72
CLOCK-209ENST00000511124 CFAP74Q9C0B2 1584 aa4.28□□□□□ -1.72
CLOCK-209ENST00000511124 DISP3Q9P2K9 1392 aa4.28□□□□□ -1.72
CLOCK-209ENST00000511124 ABCA5Q8WWZ7 1642 aa4.28□□□□□ -1.72
CLOCK-209ENST00000511124 CCNB3Q8WWL7 1395 aa4.28□□□□□ -1.72
CLOCK-209ENST00000511124 UBAP1LF5GYI3 381 aa4.27□□□□□ -1.73
CLOCK-209ENST00000511124 MAGI3Q5TCQ9 1506 aa4.27□□□□□ -1.73
CLOCK-209ENST00000511124 BIVM-ERCC5R4GMW8 1640 aa4.27□□□□□ -1.73
CLOCK-209ENST00000511124 CCDC18Q5T9S5 1454 aa4.27□□□□□ -1.73
CLOCK-209ENST00000511124 EFCAB5A4FU69 1503 aa4.27□□□□□ -1.73
CLOCK-209ENST00000511124 MEX3CQ5U5Q3 659 aaKnown RBP4.27□□□□□ -1.73
CLOCK-209ENST00000511124 GLI2P10070 1586 aa4.27□□□□□ -1.73
CLOCK-209ENST00000511124 ILDR1Q86SU0 546 aaPredicted RBP4.26□□□□□ -1.73
CLOCK-209ENST00000511124 ADGRL1O94910 1474 aa4.26□□□□□ -1.73
CLOCK-209ENST00000511124 RNF39Q9H2S5 420 aa4.26□□□□□ -1.73
CLOCK-209ENST00000511124 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLOCK-209ENST00000511124 UGGT2Q9NYU1 1516 aa4.25□□□□□ -1.73
CLOCK-209ENST00000511124 SF3B2Q13435 895 aaKnown RBP4.25□□□□□ -1.73
CLOCK-209ENST00000511124 IQSEC2Q5JU85 1478 aa4.25□□□□□ -1.73
CLOCK-209ENST00000511124 EPRSP07814 1512 aaKnown RBP4.25□□□□□ -1.73
CLOCK-209ENST00000511124 ATF5Q9Y2D1 282 aaPredicted RBP4.25□□□□□ -1.73
CLOCK-209ENST00000511124 HAP1P54257 671 aaPredicted RBP4.24□□□□□ -1.73
CLOCK-209ENST00000511124 GGT6Q6P531 493 aa4.24□□□□□ -1.73
CLOCK-209ENST00000511124 KDM5BQ9UGL1 1544 aa4.24□□□□□ -1.73
CLOCK-209ENST00000511124 SCAPERQ9BY12 1400 aa4.24□□□□□ -1.73
CLOCK-209ENST00000511124 LMTK3Q96Q04 1460 aa4.24□□□□□ -1.73
CLOCK-209ENST00000511124 NCBP3Q53F19 620 aaKnown RBP4.24□□□□□ -1.73
CLOCK-209ENST00000511124 WASHC2CQ9Y4E1 1318 aa4.24□□□□□ -1.73
CLOCK-209ENST00000511124 RAPGEF3O95398 923 aa4.24□□□□□ -1.73
CLOCK-209ENST00000511124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.24□□□□□ -1.731e-6■■□□□ 12.2
CLOCK-209ENST00000511124 CACNB1Q02641 598 aaPredicted RBP4.23□□□□□ -1.73
CLOCK-209ENST00000511124 U3KPZ7 1027 aaPredicted RBP4.23□□□□□ -1.73
CLOCK-209ENST00000511124 C9orf84Q5VXU9 1444 aa4.23□□□□□ -1.73
CLOCK-209ENST00000511124 YEATS2Q9ULM3 1422 aa4.23□□□□□ -1.73
CLOCK-209ENST00000511124 ATP10AO60312 1499 aa4.23□□□□□ -1.73
CLOCK-209ENST00000511124 PTPRKQ15262 1439 aa4.22□□□□□ -1.73
CLOCK-209ENST00000511124 CFAP43Q8NDM7 1665 aa4.22□□□□□ -1.73
CLOCK-209ENST00000511124 DIP2BQ9P265 1576 aa4.22□□□□□ -1.73
CLOCK-209ENST00000511124 ARAP3Q8WWN8 1544 aa4.22□□□□□ -1.73
CLOCK-209ENST00000511124 ZNF518AQ6AHZ1 1483 aa4.21□□□□□ -1.73
CLOCK-209ENST00000511124 RUSC2Q8N2Y8 1516 aa4.21□□□□□ -1.74
CLOCK-209ENST00000511124 ATF3P18847 181 aa4.21□□□□□ -1.74
CLOCK-209ENST00000511124 ARHGAP5Q13017 1502 aa4.21□□□□□ -1.74
CLOCK-209ENST00000511124 CHGAP10645 457 aaKnown RBP4.21□□□□□ -1.74
CLOCK-209ENST00000511124 ZFYVE16Q7Z3T8 1539 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 KDM4FA0A1W2PPD8 638 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 RTN4Q9NQC3 1192 aaKnown RBP4.2□□□□□ -1.74
CLOCK-209ENST00000511124 KIF3BO15066 747 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 NGLY1Q96IV0 654 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 TROQ12816 1431 aaPredicted RBP4.2□□□□□ -1.74
CLOCK-209ENST00000511124 SOCS7O14512 581 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 PTPRTO14522 1441 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 TRAPPC8Q9Y2L5 1435 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 FAM135AQ9P2D6 1515 aa4.2□□□□□ -1.74
CLOCK-209ENST00000511124 FHOD3Q2V2M9 1422 aa4.19□□□□□ -1.74
CLOCK-209ENST00000511124 TSPOAP1O95153 1857 aa4.19□□□□□ -1.74
CLOCK-209ENST00000511124 PLCH2O75038 1416 aa4.19□□□□□ -1.74
CLOCK-209ENST00000511124 HECW1Q76N89 1606 aa4.19□□□□□ -1.74
CLOCK-209ENST00000511124 PROSER2Q86WR7 435 aaPredicted RBP4.19□□□□□ -1.74
CLOCK-209ENST00000511124 KIAA0556O60303 1618 aa4.19□□□□□ -1.74
CLOCK-209ENST00000511124 PIP4K2BP78356 416 aa4.18□□□□□ -1.74
CLOCK-209ENST00000511124 ZNF772Q68DY9 489 aaPredicted RBP4.18□□□□□ -1.74
CLOCK-209ENST00000511124 PTPRMP28827 1452 aa4.18□□□□□ -1.74
CLOCK-209ENST00000511124 MAP3K4Q9Y6R4 1608 aa4.17□□□□□ -1.74
CLOCK-209ENST00000511124 SLC52A1Q9NWF4 448 aa4.17□□□□□ -1.74
CLOCK-209ENST00000511124 NPATQ14207 1427 aa4.17□□□□□ -1.74
CLOCK-209ENST00000511124 SETD1BQ9UPS6 1966 aaKnown RBP4.17□□□□□ -1.74
CLOCK-209ENST00000511124 TNRQ92752 1358 aa4.17□□□□□ -1.74
CLOCK-209ENST00000511124 SLC4A1APQ9BWU0 796 aaKnown RBP4.17□□□□□ -1.74
CLOCK-209ENST00000511124 KIF14Q15058 1648 aa4.17□□□□□ -1.74
CLOCK-209ENST00000511124 ADAMTSL3P82987 1691 aa4.17□□□□□ -1.74
CLOCK-209ENST00000511124 MSH6P52701 1360 aa4.17□□□□□ -1.74
CLOCK-209ENST00000511124 C11orf95C9JLR9 678 aaPredicted RBP4.16□□□□□ -1.74
CLOCK-209ENST00000511124 HSPA2P54652 639 aa4.16□□□□□ -1.74
CLOCK-209ENST00000511124 CADPS2Q86UW7 1296 aa4.16□□□□□ -1.74
CLOCK-209ENST00000511124 ANKRD30AQ9BXX3 1397 aa4.16□□□□□ -1.74
CLOCK-209ENST00000511124 ZNF326Q5BKZ1 582 aaKnown RBP4.16□□□□□ -1.74
CLOCK-209ENST00000511124 TXNDC2Q86VQ3 553 aa4.16□□□□□ -1.74
CLOCK-209ENST00000511124 ATP10BO94823 1461 aa4.16□□□□□ -1.74
CLOCK-209ENST00000511124 FAM50AQ14320 339 aaKnown RBP4.16□□□□□ -1.74
CLOCK-209ENST00000511124 PROM2Q8N271 834 aa4.16□□□□□ -1.74
CLOCK-209ENST00000511124 PRXQ9BXM0 1461 aa4.15□□□□□ -1.74
CLOCK-209ENST00000511124 RAPGEF6Q8TEU7 1601 aa4.15□□□□□ -1.74
CLOCK-209ENST00000511124 ADCY10Q96PN6 1610 aa4.15□□□□□ -1.75
CLOCK-209ENST00000511124 A0A0G2JS52 829 aa4.15□□□□□ -1.75
CLOCK-209ENST00000511124 MYT1Q01538 1121 aa4.15□□□□□ -1.75
CLOCK-209ENST00000511124 ABCA8O94911 1581 aa4.15□□□□□ -1.75
CLOCK-209ENST00000511124 KIAA1107Q9UPP5 1409 aa4.14□□□□□ -1.75
CLOCK-209ENST00000511124 PCF11O94913 1555 aaKnown RBP4.14□□□□□ -1.75
CLOCK-209ENST00000511124 LRPPRCP42704 1394 aaKnown RBP4.14□□□□□ -1.75
CLOCK-209ENST00000511124 ZCCHC11Q5TAX3 1644 aaKnown RBP4.14□□□□□ -1.75
CLOCK-209ENST00000511124 TRIM52Q96A61 297 aa4.14□□□□□ -1.75
CLOCK-209ENST00000511124 FOXD4L1Q9NU39 408 aa4.14□□□□□ -1.75
CLOCK-209ENST00000511124 KIF21BO75037 1637 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 RTEL1-TNFRSF6BF6WH68 1400 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 ATXN8OSP0DMR3 200 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 PSME1Q06323 249 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 AFAP1Q8N556 730 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 DISP1Q96F81 1524 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms