RNA–Protein interactions for RNA: ENST00000511049.5

CAST-234, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-234ENST00000511049 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
CAST-234ENST00000511049 CFAP43Q8NDM7 1665 aa10.72□□□□□ -0.69
CAST-234ENST00000511049 SAMD9Q5K651 1589 aa10.72□□□□□ -0.69
CAST-234ENST00000511049 MAP3K1Q13233 1512 aa10.71□□□□□ -0.7
CAST-234ENST00000511049 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
CAST-234ENST00000511049 HFM1A2PYH4 1435 aa10.7□□□□□ -0.7
CAST-234ENST00000511049 PTPN23Q9H3S7 1636 aa10.7□□□□□ -0.7
CAST-234ENST00000511049 CEP170Q5SW79 1584 aa10.69□□□□□ -0.7
CAST-234ENST00000511049 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
CAST-234ENST00000511049 ARHGEF11O15085 1522 aa10.69□□□□□ -0.7
CAST-234ENST00000511049 EHBP1L1Q8N3D4 1523 aa10.69□□□□□ -0.7
CAST-234ENST00000511049 FAM9BQ8IZU0 186 aa10.69□□□□□ -0.7
CAST-234ENST00000511049 NUP155O75694 1391 aa10.68□□□□□ -0.7
CAST-234ENST00000511049 HECW1Q76N89 1606 aa10.68□□□□□ -0.7
CAST-234ENST00000511049 UACAQ9BZF9 1416 aa10.68□□□□□ -0.7
CAST-234ENST00000511049 IRX6P78412 446 aaPredicted RBP10.68□□□□□ -0.7
CAST-234ENST00000511049 NBPF8Q3BBV2 869 aa10.68□□□□□ -0.7
CAST-234ENST00000511049 KDM6BO15054 1643 aa10.67□□□□□ -0.7
CAST-234ENST00000511049 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
CAST-234ENST00000511049 DCAF11Q8TEB1 546 aa10.67□□□□□ -0.7
CAST-234ENST00000511049 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
CAST-234ENST00000511049 UGGT2Q9NYU1 1516 aa10.66□□□□□ -0.7
CAST-234ENST00000511049 ABCC5O15440 1437 aa10.66□□□□□ -0.7
CAST-234ENST00000511049 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
CAST-234ENST00000511049 DAPK1P53355 1430 aa10.65□□□□□ -0.7
CAST-234ENST00000511049 AFAP1Q8N556 730 aa10.65□□□□□ -0.7
CAST-234ENST00000511049 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAST-234ENST00000511049 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
CAST-234ENST00000511049 TROQ12816 1431 aaPredicted RBP10.64□□□□□ -0.71
CAST-234ENST00000511049 ATP10BO94823 1461 aa10.62□□□□□ -0.71
CAST-234ENST00000511049 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
CAST-234ENST00000511049 CCDC184Q52MB2 194 aa10.62□□□□□ -0.71
CAST-234ENST00000511049 KIF14Q15058 1648 aa10.61□□□□□ -0.71
CAST-234ENST00000511049 RAPGEF6Q8TEU7 1601 aa10.61□□□□□ -0.71
CAST-234ENST00000511049 WASHC2AQ641Q2 1341 aa10.61□□□□□ -0.71
CAST-234ENST00000511049 ERCC6L2Q5T890 1561 aa10.61□□□□□ -0.71
CAST-234ENST00000511049 GPATCH8Q9UKJ3 1502 aaKnown RBP10.6□□□□□ -0.71
CAST-234ENST00000511049 FKBP8Q14318 412 aa10.6□□□□□ -0.71
CAST-234ENST00000511049 CARD11Q9BXL7 1154 aa10.6□□□□□ -0.71
CAST-234ENST00000511049 CAMSAP2Q08AD1 1489 aa10.6□□□□□ -0.71
CAST-234ENST00000511049 ANKRD30AQ9BXX3 1397 aa10.6□□□□□ -0.71
CAST-234ENST00000511049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.58□□□□□ -0.72
CAST-234ENST00000511049 KIF15Q9NS87 1388 aa10.58□□□□□ -0.72
CAST-234ENST00000511049 ANKRD50Q9ULJ7 1429 aa10.58□□□□□ -0.72
CAST-234ENST00000511049 NUP160Q12769 1436 aa10.58□□□□□ -0.72
CAST-234ENST00000511049 MIA2Q96PC5 1412 aa10.58□□□□□ -0.72
CAST-234ENST00000511049 MRS2Q9HD23 443 aa10.57□□□□□ -0.72
CAST-234ENST00000511049 NUTM2DQ5VT03 806 aaPredicted RBP10.57□□□□□ -0.72
CAST-234ENST00000511049 PLPPR3Q6T4P5 718 aa10.57□□□□□ -0.72
CAST-234ENST00000511049 NPM1P06748 294 aaKnown RBP eCLIP10.56□□□□□ -0.72
CAST-234ENST00000511049 CYB5RLQ6IPT4 315 aa10.56□□□□□ -0.72
CAST-234ENST00000511049 NCOA1Q15788 1441 aa10.56□□□□□ -0.72
CAST-234ENST00000511049 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
CAST-234ENST00000511049 C9orf84Q5VXU9 1444 aa10.55□□□□□ -0.72
CAST-234ENST00000511049 ST20-MTHFSA0A0A6YYL1 179 aa10.54□□□□□ -0.72
CAST-234ENST00000511049 DENND4BO75064 1496 aaPredicted RBP10.54□□□□□ -0.72
CAST-234ENST00000511049 NBPF1Q3BBV0 1214 aa10.54□□□□□ -0.72
CAST-234ENST00000511049 GGT6Q6P531 493 aa10.54□□□□□ -0.72
CAST-234ENST00000511049 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
CAST-234ENST00000511049 ARHGAP5Q13017 1502 aa10.53□□□□□ -0.72
CAST-234ENST00000511049 KIF3BO15066 747 aa10.53□□□□□ -0.72
CAST-234ENST00000511049 EFCAB2Q5VUJ9 269 aa10.53□□□□□ -0.72
CAST-234ENST00000511049 SUPT16HQ9Y5B9 1047 aaKnown RBP10.53□□□□□ -0.72
CAST-234ENST00000511049 CHD1O14646 1710 aa10.52□□□□□ -0.72
CAST-234ENST00000511049 AKNAQ7Z591 1439 aa10.52□□□□□ -0.73
CAST-234ENST00000511049 NEFLP07196 543 aa10.51□□□□□ -0.73
CAST-234ENST00000511049 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
CAST-234ENST00000511049 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
CAST-234ENST00000511049 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
CAST-234ENST00000511049 SPAG9O60271 1321 aaKnown RBP10.5□□□□□ -0.73
CAST-234ENST00000511049 CC2D1BQ5T0F9 858 aaKnown RBP10.49□□□□□ -0.73
CAST-234ENST00000511049 RAPGEF3O95398 923 aa10.48□□□□□ -0.73
CAST-234ENST00000511049 USP47Q96K76 1375 aa10.47□□□□□ -0.73
CAST-234ENST00000511049 MLECQ14165 292 aa10.47□□□□□ -0.73
CAST-234ENST00000511049 ROCK2O75116 1388 aaKnown RBP10.47□□□□□ -0.73
CAST-234ENST00000511049 ROCK1Q13464 1354 aa10.46□□□□□ -0.73
CAST-234ENST00000511049 PLEKHH2Q8IVE3 1493 aa10.46□□□□□ -0.74
CAST-234ENST00000511049 SYCP2Q9BX26 1530 aa10.45□□□□□ -0.74
CAST-234ENST00000511049 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
CAST-234ENST00000511049 PRKRIP1Q9H875 184 aaPredicted RBP10.45□□□□□ -0.74
CAST-234ENST00000511049 PZPP20742 1482 aa10.45□□□□□ -0.74
CAST-234ENST00000511049 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
CAST-234ENST00000511049 KIAA1107Q9UPP5 1409 aa10.45□□□□□ -0.74
CAST-234ENST00000511049 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
CAST-234ENST00000511049 TMC1Q8TDI8 760 aa10.44□□□□□ -0.74
CAST-234ENST00000511049 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
CAST-234ENST00000511049 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
CAST-234ENST00000511049 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
CAST-234ENST00000511049 TRAPPC8Q9Y2L5 1435 aa10.43□□□□□ -0.74
CAST-234ENST00000511049 RPRD2Q5VT52 1461 aaKnown RBP10.43□□□□□ -0.74
CAST-234ENST00000511049 ABCA8O94911 1581 aa10.42□□□□□ -0.74
CAST-234ENST00000511049 TNNT2P45379 298 aaPredicted RBP10.42□□□□□ -0.74
CAST-234ENST00000511049 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
CAST-234ENST00000511049 GLI2P10070 1586 aa10.41□□□□□ -0.74
CAST-234ENST00000511049 KDM5BQ9UGL1 1544 aa10.4□□□□□ -0.74
CAST-234ENST00000511049 CCDC141Q6ZP82 1450 aa10.4□□□□□ -0.74
CAST-234ENST00000511049 TTC37Q6PGP7 1564 aa10.4□□□□□ -0.75
CAST-234ENST00000511049 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
CAST-234ENST00000511049 MBD5Q9P267 1494 aa10.39□□□□□ -0.75
CAST-234ENST00000511049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms