RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
NEK1-206ENST00000510533 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
NEK1-206ENST00000510533 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
NEK1-206ENST00000510533 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
NEK1-206ENST00000510533 PTMSP20962 102 aa13.44□□□□□ -0.26
NEK1-206ENST00000510533 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
NEK1-206ENST00000510533 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
NEK1-206ENST00000510533 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
NEK1-206ENST00000510533 NPHP1O15259 732 aa13.42□□□□□ -0.26
NEK1-206ENST00000510533 VPS8Q8N3P4 1428 aa13.42□□□□□ -0.26
NEK1-206ENST00000510533 RWDD1Q9H446 243 aaPredicted RBP13.42□□□□□ -0.26
NEK1-206ENST00000510533 RALBP1Q15311 655 aa13.42□□□□□ -0.26
NEK1-206ENST00000510533 SOGA1O94964 1423 aa13.42□□□□□ -0.26
NEK1-206ENST00000510533 PKD2Q13563 968 aa13.41□□□□□ -0.26
NEK1-206ENST00000510533 RTF1Q92541 710 aaKnown RBP13.4□□□□□ -0.26
NEK1-206ENST00000510533 SOX12O15370 315 aa13.39□□□□□ -0.27
NEK1-206ENST00000510533 SLKQ9H2G2 1235 aaPredicted RBP13.39□□□□□ -0.27
NEK1-206ENST00000510533 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
NEK1-206ENST00000510533 NACADO15069 1562 aa13.39□□□□□ -0.27
NEK1-206ENST00000510533 KIAA1211Q6ZU35 1233 aa13.39□□□□□ -0.27
NEK1-206ENST00000510533 APBB1O00213 710 aa13.39□□□□□ -0.27
NEK1-206ENST00000510533 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
NEK1-206ENST00000510533 CUX2O14529 1486 aa13.38□□□□□ -0.27
NEK1-206ENST00000510533 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
NEK1-206ENST00000510533 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
NEK1-206ENST00000510533 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
NEK1-206ENST00000510533 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
NEK1-206ENST00000510533 KIAA2012Q0VF49 1180 aa13.38□□□□□ -0.27
NEK1-206ENST00000510533 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
NEK1-206ENST00000510533 FOXD1Q16676 465 aa13.37□□□□□ -0.27
NEK1-206ENST00000510533 CALD1Q05682 793 aaKnown RBP13.37□□□□□ -0.27
NEK1-206ENST00000510533 HDGFL2Q7Z4V5 671 aaPredicted RBP13.37□□□□□ -0.27
NEK1-206ENST00000510533 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
NEK1-206ENST00000510533 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
NEK1-206ENST00000510533 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.27
NEK1-206ENST00000510533 KANK4Q5T7N3 995 aaPredicted RBP13.36□□□□□ -0.27
NEK1-206ENST00000510533 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
NEK1-206ENST00000510533 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
NEK1-206ENST00000510533 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
NEK1-206ENST00000510533 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
NEK1-206ENST00000510533 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
NEK1-206ENST00000510533 SYAP1Q96A49 352 aaPredicted RBP13.34□□□□□ -0.27
NEK1-206ENST00000510533 GOLGA6L3A6NEY3 463 aa13.33□□□□□ -0.28
NEK1-206ENST00000510533 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
NEK1-206ENST00000510533 MFAP1P55081 439 aaKnown RBP13.32□□□□□ -0.28
NEK1-206ENST00000510533 STK26Q9P289 416 aa13.32□□□□□ -0.28
NEK1-206ENST00000510533 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
NEK1-206ENST00000510533 NUP155O75694 1391 aa13.29□□□□□ -0.28
NEK1-206ENST00000510533 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
NEK1-206ENST00000510533 SMC4Q9NTJ3 1288 aa13.29□□□□□ -0.28
NEK1-206ENST00000510533 GGT6Q6P531 493 aa13.29□□□□□ -0.28
NEK1-206ENST00000510533 MLECQ14165 292 aa13.28□□□□□ -0.28
NEK1-206ENST00000510533 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
NEK1-206ENST00000510533 EIF3AQ14152 1382 aaKnown RBP13.27□□□□□ -0.28
NEK1-206ENST00000510533 NLRP13Q86W25 1043 aa13.27□□□□□ -0.28
NEK1-206ENST00000510533 FMN1Q68DA7 1419 aa13.27□□□□□ -0.29
NEK1-206ENST00000510533 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
NEK1-206ENST00000510533 ARID3AQ99856 593 aa13.26□□□□□ -0.29
NEK1-206ENST00000510533 STK31Q9BXU1 1019 aa13.26□□□□□ -0.29
NEK1-206ENST00000510533 HMMRO75330 724 aa13.26□□□□□ -0.29
NEK1-206ENST00000510533 CLSTN1O94985 981 aa13.26□□□□□ -0.29
NEK1-206ENST00000510533 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
NEK1-206ENST00000510533 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
NEK1-206ENST00000510533 TPM4P67936 248 aa13.26□□□□□ -0.29
NEK1-206ENST00000510533 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
NEK1-206ENST00000510533 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
NEK1-206ENST00000510533 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
NEK1-206ENST00000510533 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
NEK1-206ENST00000510533 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
NEK1-206ENST00000510533 TRIM6-TRIM34B2RNG4 842 aa13.24□□□□□ -0.29
NEK1-206ENST00000510533 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
NEK1-206ENST00000510533 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
NEK1-206ENST00000510533 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
NEK1-206ENST00000510533 GPATCH3Q96I76 525 aa13.23□□□□□ -0.29
NEK1-206ENST00000510533 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
NEK1-206ENST00000510533 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
NEK1-206ENST00000510533 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
NEK1-206ENST00000510533 ABCC8Q09428 1581 aa13.21□□□□□ -0.29
NEK1-206ENST00000510533 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
NEK1-206ENST00000510533 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
NEK1-206ENST00000510533 USP35Q9P2H5 1018 aa13.21□□□□□ -0.29
NEK1-206ENST00000510533 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.3
NEK1-206ENST00000510533 HSP90B1P14625 803 aaKnown RBP13.21□□□□□ -0.3
NEK1-206ENST00000510533 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.3
NEK1-206ENST00000510533 ST18O60284 1047 aa13.2□□□□□ -0.3
NEK1-206ENST00000510533 CCDC88BA6NC98 1476 aa13.19□□□□□ -0.3
NEK1-206ENST00000510533 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
NEK1-206ENST00000510533 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
NEK1-206ENST00000510533 KIF15Q9NS87 1388 aa13.19□□□□□ -0.3
NEK1-206ENST00000510533 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
NEK1-206ENST00000510533 PHF14O94880 888 aa13.19□□□□□ -0.3
NEK1-206ENST00000510533 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
NEK1-206ENST00000510533 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
NEK1-206ENST00000510533 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
NEK1-206ENST00000510533 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
NEK1-206ENST00000510533 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
NEK1-206ENST00000510533 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
NEK1-206ENST00000510533 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
NEK1-206ENST00000510533 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
NEK1-206ENST00000510533 FAM161AQ3B820 660 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms