RNA–Protein interactions for RNA: ENST00000510361.5

SDHA-213, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2 BASIC

Gene SDHA, Length 2,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-213ENST00000510361 TSPOAP1O95153 1857 aa26.07■■□□□ 1.76
SDHA-213ENST00000510361 MYOM3Q5VTT5 1437 aa26.05■■□□□ 1.76
SDHA-213ENST00000510361 ABCA9Q8IUA7 1624 aa26.02■■□□□ 1.76
SDHA-213ENST00000510361 TROQ12816 1431 aaPredicted RBP26.02■■□□□ 1.76
SDHA-213ENST00000510361 PTPRKQ15262 1439 aa26.02■■□□□ 1.76
SDHA-213ENST00000510361 PPRC1Q5VV67 1664 aaKnown RBP26■■□□□ 1.75
SDHA-213ENST00000510361 CD109Q6YHK3 1445 aa25.99■■□□□ 1.75
SDHA-213ENST00000510361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.96■■□□□ 1.752e-7■■□□□ 12
SDHA-213ENST00000510361 KIF14Q15058 1648 aa25.95■■□□□ 1.75
SDHA-213ENST00000510361 PTPN23Q9H3S7 1636 aa25.95■■□□□ 1.74
SDHA-213ENST00000510361 TTC37Q6PGP7 1564 aa25.94■■□□□ 1.74
SDHA-213ENST00000510361 HFM1A2PYH4 1435 aa25.92■■□□□ 1.74
SDHA-213ENST00000510361 TEX14Q8IWB6 1497 aa25.92■■□□□ 1.74
SDHA-213ENST00000510361 TCOF1Q13428 1488 aaKnown RBP25.9■■□□□ 1.74
SDHA-213ENST00000510361 MIER1Q8N108 512 aa25.89■■□□□ 1.74
SDHA-213ENST00000510361 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
SDHA-213ENST00000510361 NAIPQ13075 1403 aa25.85■■□□□ 1.73
SDHA-213ENST00000510361 SIN3AQ96ST3 1273 aa25.84■■□□□ 1.73
SDHA-213ENST00000510361 MYO5CQ9NQX4 1742 aa25.83■■□□□ 1.73
SDHA-213ENST00000510361 ACIN1Q9UKV3 1341 aaKnown RBP25.83■■□□□ 1.72
SDHA-213ENST00000510361 NEUROD1Q13562 356 aa25.82■■□□□ 1.72
SDHA-213ENST00000510361 PLCH2O75038 1416 aa25.81■■□□□ 1.72
SDHA-213ENST00000510361 MIA2Q96PC5 1412 aa25.8■■□□□ 1.72
SDHA-213ENST00000510361 KDM6BO15054 1643 aa25.79■■□□□ 1.72
SDHA-213ENST00000510361 NEO1Q92859 1461 aa25.77■■□□□ 1.72
SDHA-213ENST00000510361 ARAP3Q8WWN8 1544 aa25.77■■□□□ 1.72
SDHA-213ENST00000510361 FANCAO15360 1455 aa25.77■■□□□ 1.72
SDHA-213ENST00000510361 CFAP74Q9C0B2 1584 aa25.76■■□□□ 1.71
SDHA-213ENST00000510361 CDC42BPAQ5VT25 1732 aa25.75■■□□□ 1.71
SDHA-213ENST00000510361 PREX2Q70Z35 1606 aa25.75■■□□□ 1.71
SDHA-213ENST00000510361 CDC42BPBQ9Y5S2 1711 aa25.74■■□□□ 1.71
SDHA-213ENST00000510361 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
SDHA-213ENST00000510361 GCC2Q8IWJ2 1684 aa25.73■■□□□ 1.71
SDHA-213ENST00000510361 COL17A1Q9UMD9 1497 aaPredicted RBP25.72■■□□□ 1.71
SDHA-213ENST00000510361 ARHGAP5Q13017 1502 aa25.72■■□□□ 1.71
SDHA-213ENST00000510361 GPATCH8Q9UKJ3 1502 aaKnown RBP25.71■■□□□ 1.71
SDHA-213ENST00000510361 CENPBP07199 599 aaPredicted RBP25.7■■□□□ 1.71
SDHA-213ENST00000510361 EFCAB2Q5VUJ9 269 aa25.7■■□□□ 1.71
SDHA-213ENST00000510361 AKNAQ7Z591 1439 aa25.7■■□□□ 1.7
SDHA-213ENST00000510361 ITSN2Q9NZM3 1697 aa25.65■■□□□ 1.7
SDHA-213ENST00000510361 RRP7BPQ9NSQ0 103 aa25.65■■□□□ 1.7
SDHA-213ENST00000510361 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
SDHA-213ENST00000510361 ADGRL1O94910 1474 aa25.63■■□□□ 1.69
SDHA-213ENST00000510361 PPP1R15AO75807 674 aaPredicted RBP25.63■■□□□ 1.69
SDHA-213ENST00000510361 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
SDHA-213ENST00000510361 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
SDHA-213ENST00000510361 DNMT1P26358 1616 aaKnown RBP25.6■■□□□ 1.69
SDHA-213ENST00000510361 SCAPERQ9BY12 1400 aa25.59■■□□□ 1.69
SDHA-213ENST00000510361 DAPK1P53355 1430 aa25.59■■□□□ 1.69
SDHA-213ENST00000510361 RAPGEF3O95398 923 aa25.58■■□□□ 1.69
SDHA-213ENST00000510361 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.69
SDHA-213ENST00000510361 SAMD9LQ8IVG5 1584 aa25.57■■□□□ 1.68
SDHA-213ENST00000510361 RICTORQ6R327 1708 aa25.57■■□□□ 1.68
SDHA-213ENST00000510361 ABCC5O15440 1437 aa25.57■■□□□ 1.68
SDHA-213ENST00000510361 ZNF644Q9H582 1327 aaPredicted RBP25.57■■□□□ 1.68
SDHA-213ENST00000510361 FRMPD1Q5SYB0 1578 aa25.56■■□□□ 1.68
SDHA-213ENST00000510361 YTHDC1Q96MU7 727 aaKnown RBP25.56■■□□□ 1.68
SDHA-213ENST00000510361 ABCC1P33527 1531 aa25.56■■□□□ 1.68
SDHA-213ENST00000510361 ROCK1Q13464 1354 aa25.54■■□□□ 1.68
SDHA-213ENST00000510361 POGZQ7Z3K3 1410 aa25.53■■□□□ 1.68
SDHA-213ENST00000510361 ARHGEF12Q9NZN5 1544 aa25.51■■□□□ 1.67
SDHA-213ENST00000510361 TONSLQ96HA7 1378 aa25.5■■□□□ 1.67
SDHA-213ENST00000510361 PLEKHH2Q8IVE3 1493 aa25.5■■□□□ 1.67
SDHA-213ENST00000510361 SYCP2Q9BX26 1530 aa25.49■■□□□ 1.67
SDHA-213ENST00000510361 KIAA1107Q9UPP5 1409 aa25.48■■□□□ 1.67
SDHA-213ENST00000510361 ZNF518AQ6AHZ1 1483 aa25.48■■□□□ 1.67
SDHA-213ENST00000510361 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
SDHA-213ENST00000510361 ZMYM4Q5VZL5 1548 aa25.46■■□□□ 1.67
SDHA-213ENST00000510361 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
SDHA-213ENST00000510361 HNRNPMP52272 730 aaKnown RBP eCLIP25.46■■□□□ 1.67
SDHA-213ENST00000510361 AFAP1Q8N556 730 aa25.45■■□□□ 1.66
SDHA-213ENST00000510361 GTF3C3Q9Y5Q9 886 aa25.45■■□□□ 1.66
SDHA-213ENST00000510361 KDM5CP41229 1560 aa25.44■■□□□ 1.66
SDHA-213ENST00000510361 TRIM52Q96A61 297 aa25.43■■□□□ 1.66
SDHA-213ENST00000510361 MPHOSPH9Q99550 1183 aa25.42■■□□□ 1.66
SDHA-213ENST00000510361 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
SDHA-213ENST00000510361 MBD5Q9P267 1494 aa25.4■■□□□ 1.66
SDHA-213ENST00000510361 CROCC2H7BZ55 1655 aa25.38■■□□□ 1.65
SDHA-213ENST00000510361 HECW2Q9P2P5 1572 aa25.37■■□□□ 1.65
SDHA-213ENST00000510361 ZFYVE16Q7Z3T8 1539 aa25.37■■□□□ 1.65
SDHA-213ENST00000510361 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
SDHA-213ENST00000510361 ADGBQ8N7X0 1667 aa25.37■■□□□ 1.65
SDHA-213ENST00000510361 MLH3Q9UHC1 1453 aa25.35■■□□□ 1.65
SDHA-213ENST00000510361 NCOA1Q15788 1441 aa25.35■■□□□ 1.65
SDHA-213ENST00000510361 YEATS2Q9ULM3 1422 aa25.35■■□□□ 1.65
SDHA-213ENST00000510361 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
SDHA-213ENST00000510361 ARHGEF5Q12774 1597 aa25.34■■□□□ 1.65
SDHA-213ENST00000510361 HIRIP3Q9BW71 556 aaPredicted RBP25.34■■□□□ 1.65
SDHA-213ENST00000510361 MYT1LQ9UL68 1186 aa25.33■■□□□ 1.65
SDHA-213ENST00000510361 CCDC141Q6ZP82 1450 aa25.33■■□□□ 1.65
SDHA-213ENST00000510361 RSPH4AQ5TD94 716 aa25.33■■□□□ 1.64
SDHA-213ENST00000510361 DDX10Q13206 875 aaKnown RBP25.32■■□□□ 1.64
SDHA-213ENST00000510361 SPAG9O60271 1321 aaKnown RBP25.32■■□□□ 1.64
SDHA-213ENST00000510361 KIDINS220Q9ULH0 1771 aa25.32■■□□□ 1.64
SDHA-213ENST00000510361 ANKRD30BQ9BXX2 1392 aa25.3■■□□□ 1.64
SDHA-213ENST00000510361 FOXD1Q16676 465 aa25.3■■□□□ 1.64
SDHA-213ENST00000510361 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
SDHA-213ENST00000510361 ATP7AQ04656 1500 aa25.28■■□□□ 1.64
SDHA-213ENST00000510361 ABCA6Q8N139 1617 aa25.27■■□□□ 1.64
SDHA-213ENST00000510361 DIP2CQ9Y2E4 1556 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms