RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MAGI3Q5TCQ9 1506 aa7.11□□□□□ -1.27
PDLIM5-214ENST00000510099 NCOA2Q15596 1464 aa7.11□□□□□ -1.27
PDLIM5-214ENST00000510099 SPDYE2BA6NHP3 402 aa7.11□□□□□ -1.27
PDLIM5-214ENST00000510099 SPDYE6P0CI01 402 aa7.11□□□□□ -1.27
PDLIM5-214ENST00000510099 FBLN2P98095 1184 aa7.11□□□□□ -1.27
PDLIM5-214ENST00000510099 SPDYE2Q495Y8 402 aa7.11□□□□□ -1.27
PDLIM5-214ENST00000510099 EPRSP07814 1512 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-214ENST00000510099 MYOM3Q5VTT5 1437 aa7.1□□□□□ -1.27
PDLIM5-214ENST00000510099 SUPT6HQ7KZ85 1726 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-214ENST00000510099 ZBTB22O15209 634 aa7.09□□□□□ -1.27
PDLIM5-214ENST00000510099 ATP1B4Q9UN42 357 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-214ENST00000510099 RAB3GAP2Q9H2M9 1393 aa7.08□□□□□ -1.28
PDLIM5-214ENST00000510099 CDK13Q14004 1512 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-214ENST00000510099 NUP153P49790 1475 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-214ENST00000510099 TCOF1Q13428 1488 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-214ENST00000510099 SETD5Q9C0A6 1442 aa7.08□□□□□ -1.28
PDLIM5-214ENST00000510099 MAPKBP1O60336 1514 aa7.07□□□□□ -1.28
PDLIM5-214ENST00000510099 SPDYE1Q8NFV5 336 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-214ENST00000510099 RAPGEF6Q8TEU7 1601 aa7.07□□□□□ -1.28
PDLIM5-214ENST00000510099 FAM50AQ14320 339 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-214ENST00000510099 CHMP7Q8WUX9 453 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-214ENST00000510099 HFM1A2PYH4 1435 aa7.06□□□□□ -1.28
PDLIM5-214ENST00000510099 PTPN23Q9H3S7 1636 aa7.05□□□□□ -1.28
PDLIM5-214ENST00000510099 CARMIL2Q6F5E8 1435 aa7.05□□□□□ -1.28
PDLIM5-214ENST00000510099 AKNAQ7Z591 1439 aa7.05□□□□□ -1.28
PDLIM5-214ENST00000510099 MIA2Q96PC5 1412 aa7.05□□□□□ -1.28
PDLIM5-214ENST00000510099 PTPRKQ15262 1439 aa7.04□□□□□ -1.28
PDLIM5-214ENST00000510099 ITGAEP38570 1179 aa7.04□□□□□ -1.28
PDLIM5-214ENST00000510099 C19orf67A6NJJ6 358 aa7.03□□□□□ -1.28
PDLIM5-214ENST00000510099 GABBR2O75899 941 aa7.03□□□□□ -1.28
PDLIM5-214ENST00000510099 ATXN8OSP0DMR3 200 aa7.03□□□□□ -1.28
PDLIM5-214ENST00000510099 CHADLQ6NUI6 762 aa7.03□□□□□ -1.28
PDLIM5-214ENST00000510099 ZNF692Q9BU19 519 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-214ENST00000510099 PLB1Q6P1J6 1458 aa7.03□□□□□ -1.28
PDLIM5-214ENST00000510099 ABCA8O94911 1581 aa7.03□□□□□ -1.28
PDLIM5-214ENST00000510099 TROQ12816 1431 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-214ENST00000510099 NAIPQ13075 1403 aa7.01□□□□□ -1.29
PDLIM5-214ENST00000510099 ADCY10Q96PN6 1610 aa7.01□□□□□ -1.29
PDLIM5-214ENST00000510099 ZNF316A6NFI3 1004 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-214ENST00000510099 LHX8Q68G74 356 aa7.01□□□□□ -1.29
PDLIM5-214ENST00000510099 JPH4Q96JJ6 628 aa7□□□□□ -1.29
PDLIM5-214ENST00000510099 SHROOM2Q13796 1616 aa7□□□□□ -1.29
PDLIM5-214ENST00000510099 UACAQ9BZF9 1416 aa7□□□□□ -1.29
PDLIM5-214ENST00000510099 GCC2Q8IWJ2 1684 aa7□□□□□ -1.29
PDLIM5-214ENST00000510099 MKRN4PQ13434 485 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-214ENST00000510099 PRG4Q92954 1404 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-214ENST00000510099 CHD1O14646 1710 aa6.98□□□□□ -1.29
PDLIM5-214ENST00000510099 CDK11AQ9UQ88 783 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-214ENST00000510099 DNMT1P26358 1616 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-214ENST00000510099 ROCK1Q13464 1354 aa6.97□□□□□ -1.29
PDLIM5-214ENST00000510099 ITSN2Q9NZM3 1697 aa6.97□□□□□ -1.29
PDLIM5-214ENST00000510099 ARID3CA6NKF2 412 aa6.97□□□□□ -1.29
PDLIM5-214ENST00000510099 DAPK1P53355 1430 aa6.97□□□□□ -1.29
PDLIM5-214ENST00000510099 DIEXFQ68CQ4 756 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-214ENST00000510099 KIF14Q15058 1648 aa6.97□□□□□ -1.29
PDLIM5-214ENST00000510099 ABCC10Q5T3U5 1492 aa6.97□□□□□ -1.29
PDLIM5-214ENST00000510099 CLASP1Q7Z460 1538 aa6.96□□□□□ -1.29
PDLIM5-214ENST00000510099 GPATCH8Q9UKJ3 1502 aaKnown RBP6.96□□□□□ -1.29
PDLIM5-214ENST00000510099 ABCC5O15440 1437 aa6.96□□□□□ -1.3
PDLIM5-214ENST00000510099 SSUH2Q9Y2M2 353 aa6.96□□□□□ -1.3
PDLIM5-214ENST00000510099 ATP10BO94823 1461 aa6.96□□□□□ -1.3
PDLIM5-214ENST00000510099 CAMSAP2Q08AD1 1489 aa6.96□□□□□ -1.3
PDLIM5-214ENST00000510099 PTPRGP23470 1445 aa6.95□□□□□ -1.3
PDLIM5-214ENST00000510099 PRR29P0C7W0 189 aa6.95□□□□□ -1.3
PDLIM5-214ENST00000510099 ADGRL2O95490 1459 aa6.94□□□□□ -1.3
PDLIM5-214ENST00000510099 SHANK2Q9UPX8 1470 aa6.94□□□□□ -1.3
PDLIM5-214ENST00000510099 TIMELESSQ9UNS1 1208 aa6.94□□□□□ -1.3
PDLIM5-214ENST00000510099 DENND4BO75064 1496 aaPredicted RBP6.93□□□□□ -1.3
PDLIM5-214ENST00000510099 ABCC2Q92887 1545 aa6.93□□□□□ -1.3
PDLIM5-214ENST00000510099 KDM6BO15054 1643 aa6.93□□□□□ -1.3
PDLIM5-214ENST00000510099 CROCC2H7BZ55 1655 aa6.93□□□□□ -1.3
PDLIM5-214ENST00000510099 ACIN1Q9UKV3 1341 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-214ENST00000510099 KDM5BQ9UGL1 1544 aa6.91□□□□□ -1.3
PDLIM5-214ENST00000510099 ERCC6L2Q5T890 1561 aa6.91□□□□□ -1.3
PDLIM5-214ENST00000510099 ADGBQ8N7X0 1667 aa6.91□□□□□ -1.3
PDLIM5-214ENST00000510099 RRP7BPQ9NSQ0 103 aa6.91□□□□□ -1.3
PDLIM5-214ENST00000510099 ZNF644Q9H582 1327 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-214ENST00000510099 UHRF1BP1LA0JNW5 1464 aa6.91□□□□□ -1.3
PDLIM5-214ENST00000510099 CDC42BPAQ5VT25 1732 aa6.9□□□□□ -1.3
PDLIM5-214ENST00000510099 CD44P16070 742 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-214ENST00000510099 SIN3AQ96ST3 1273 aa6.9□□□□□ -1.3
PDLIM5-214ENST00000510099 CFDP1Q9UEE9 299 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-214ENST00000510099 CHIC2Q9UKJ5 165 aa6.9□□□□□ -1.3
PDLIM5-214ENST00000510099 ARHGEF5Q12774 1597 aa6.9□□□□□ -1.31
PDLIM5-214ENST00000510099 PREX2Q70Z35 1606 aa6.9□□□□□ -1.31
PDLIM5-214ENST00000510099 PLEKHD1A6NEE1 506 aa6.89□□□□□ -1.31
PDLIM5-214ENST00000510099 NCOA1Q15788 1441 aa6.89□□□□□ -1.31
PDLIM5-214ENST00000510099 TTC37Q6PGP7 1564 aa6.88□□□□□ -1.31
PDLIM5-214ENST00000510099 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
PDLIM5-214ENST00000510099 TONSLQ96HA7 1378 aa6.88□□□□□ -1.31
PDLIM5-214ENST00000510099 PZPP20742 1482 aa6.87□□□□□ -1.31
PDLIM5-214ENST00000510099 MBD5Q9P267 1494 aa6.87□□□□□ -1.31
PDLIM5-214ENST00000510099 ANKRD30AQ9BXX3 1397 aa6.87□□□□□ -1.31
PDLIM5-214ENST00000510099 PLSCR2Q9NRY7 297 aa6.87□□□□□ -1.31
PDLIM5-214ENST00000510099 SAMD9LQ8IVG5 1584 aa6.86□□□□□ -1.31
PDLIM5-214ENST00000510099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDLIM5-214ENST00000510099 KDM5DQ9BY66 1539 aa6.86□□□□□ -1.31
PDLIM5-214ENST00000510099 CCDC141Q6ZP82 1450 aa6.86□□□□□ -1.31
PDLIM5-214ENST00000510099 PPP1R15AO75807 674 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-214ENST00000510099 NEUROD1Q13562 356 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms