RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 CDC42BPAQ5VT25 1732 aa18.84■□□□□ 0.61
LYSMD3-204ENST00000509384 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.61
LYSMD3-204ENST00000509384 ZNF777Q9ULD5 760 aaPredicted RBP18.83■□□□□ 0.6
LYSMD3-204ENST00000509384 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
LYSMD3-204ENST00000509384 PREX2Q70Z35 1606 aa18.81■□□□□ 0.6
LYSMD3-204ENST00000509384 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
LYSMD3-204ENST00000509384 DAPK1P53355 1430 aa18.8■□□□□ 0.6
LYSMD3-204ENST00000509384 RAB3GAP2Q9H2M9 1393 aa18.78■□□□□ 0.6
LYSMD3-204ENST00000509384 ARHGAP5Q13017 1502 aa18.78■□□□□ 0.6
LYSMD3-204ENST00000509384 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
LYSMD3-204ENST00000509384 ABCC5O15440 1437 aa18.78■□□□□ 0.6
LYSMD3-204ENST00000509384 HFM1A2PYH4 1435 aa18.77■□□□□ 0.6
LYSMD3-204ENST00000509384 PLCH2O75038 1416 aa18.76■□□□□ 0.59
LYSMD3-204ENST00000509384 MYO5CQ9NQX4 1742 aa18.76■□□□□ 0.59
LYSMD3-204ENST00000509384 AKNAQ7Z591 1439 aa18.75■□□□□ 0.59
LYSMD3-204ENST00000509384 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
LYSMD3-204ENST00000509384 CHIC2Q9UKJ5 165 aa18.74■□□□□ 0.59
LYSMD3-204ENST00000509384 CDC42BPBQ9Y5S2 1711 aa18.74■□□□□ 0.59
LYSMD3-204ENST00000509384 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
LYSMD3-204ENST00000509384 ABCA9Q8IUA7 1624 aa18.72■□□□□ 0.59
LYSMD3-204ENST00000509384 NAIPQ13075 1403 aa18.72■□□□□ 0.59
LYSMD3-204ENST00000509384 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
LYSMD3-204ENST00000509384 MAPKBP1O60336 1514 aa18.71■□□□□ 0.59
LYSMD3-204ENST00000509384 ARAP3Q8WWN8 1544 aa18.71■□□□□ 0.59
LYSMD3-204ENST00000509384 PLEKHH2Q8IVE3 1493 aa18.71■□□□□ 0.59
LYSMD3-204ENST00000509384 EFCAB2Q5VUJ9 269 aa18.7■□□□□ 0.58
LYSMD3-204ENST00000509384 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
LYSMD3-204ENST00000509384 SHANK2Q9UPX8 1470 aa18.69■□□□□ 0.58
LYSMD3-204ENST00000509384 ARHGEF5Q12774 1597 aa18.69■□□□□ 0.58
LYSMD3-204ENST00000509384 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
LYSMD3-204ENST00000509384 MBD5Q9P267 1494 aa18.68■□□□□ 0.58
LYSMD3-204ENST00000509384 KIAA1107Q9UPP5 1409 aa18.68■□□□□ 0.58
LYSMD3-204ENST00000509384 CROCC2H7BZ55 1655 aa18.68■□□□□ 0.58
LYSMD3-204ENST00000509384 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
LYSMD3-204ENST00000509384 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
LYSMD3-204ENST00000509384 SYCP2Q9BX26 1530 aa18.67■□□□□ 0.58
LYSMD3-204ENST00000509384 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
LYSMD3-204ENST00000509384 RSPH4AQ5TD94 716 aa18.66■□□□□ 0.58
LYSMD3-204ENST00000509384 ADGRL2O95490 1459 aa18.66■□□□□ 0.58
LYSMD3-204ENST00000509384 GCC2Q8IWJ2 1684 aa18.65■□□□□ 0.58
LYSMD3-204ENST00000509384 C9orf84Q5VXU9 1444 aa18.65■□□□□ 0.58
LYSMD3-204ENST00000509384 TSPY4P0CV99 314 aa18.64■□□□□ 0.58
LYSMD3-204ENST00000509384 TSPY10P0CW01 314 aa18.64■□□□□ 0.58
LYSMD3-204ENST00000509384 ANKRD30AQ9BXX3 1397 aa18.64■□□□□ 0.57
LYSMD3-204ENST00000509384 ABCC1P33527 1531 aa18.64■□□□□ 0.57
LYSMD3-204ENST00000509384 FANCAO15360 1455 aa18.63■□□□□ 0.57
LYSMD3-204ENST00000509384 ADGBQ8N7X0 1667 aa18.62■□□□□ 0.57
LYSMD3-204ENST00000509384 NCOA1Q15788 1441 aa18.62■□□□□ 0.57
LYSMD3-204ENST00000509384 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
LYSMD3-204ENST00000509384 ARHGEF12Q9NZN5 1544 aa18.6■□□□□ 0.57
LYSMD3-204ENST00000509384 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
LYSMD3-204ENST00000509384 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
LYSMD3-204ENST00000509384 ADGRL1O94910 1474 aa18.56■□□□□ 0.56
LYSMD3-204ENST00000509384 KDM6BO15054 1643 aa18.56■□□□□ 0.56
LYSMD3-204ENST00000509384 ACIN1Q9UKV3 1341 aaKnown RBP18.55■□□□□ 0.56
LYSMD3-204ENST00000509384 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
LYSMD3-204ENST00000509384 GLI2P10070 1586 aa18.55■□□□□ 0.56
LYSMD3-204ENST00000509384 CFAP74Q9C0B2 1584 aa18.54■□□□□ 0.56
LYSMD3-204ENST00000509384 KIF15Q9NS87 1388 aa18.54■□□□□ 0.56
LYSMD3-204ENST00000509384 SCAPERQ9BY12 1400 aa18.52■□□□□ 0.56
LYSMD3-204ENST00000509384 ANKRD50Q9ULJ7 1429 aa18.52■□□□□ 0.56
LYSMD3-204ENST00000509384 DIP2BQ9P265 1576 aa18.52■□□□□ 0.55
LYSMD3-204ENST00000509384 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
LYSMD3-204ENST00000509384 FAM69CQ0P6D2 419 aa18.5■□□□□ 0.55
LYSMD3-204ENST00000509384 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
LYSMD3-204ENST00000509384 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
LYSMD3-204ENST00000509384 NEO1Q92859 1461 aa18.49■□□□□ 0.55
LYSMD3-204ENST00000509384 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
LYSMD3-204ENST00000509384 RTEL1-TNFRSF6BF6WH68 1400 aa18.48■□□□□ 0.55
LYSMD3-204ENST00000509384 AFAP1Q8N556 730 aa18.48■□□□□ 0.55
LYSMD3-204ENST00000509384 ZFYVE16Q7Z3T8 1539 aa18.46■□□□□ 0.55
LYSMD3-204ENST00000509384 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
LYSMD3-204ENST00000509384 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
LYSMD3-204ENST00000509384 DUOX2Q9NRD8 1548 aa18.43■□□□□ 0.54
LYSMD3-204ENST00000509384 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
LYSMD3-204ENST00000509384 ATP7AQ04656 1500 aa18.42■□□□□ 0.54
LYSMD3-204ENST00000509384 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
LYSMD3-204ENST00000509384 MPHOSPH9Q99550 1183 aa18.41■□□□□ 0.54
LYSMD3-204ENST00000509384 ERBINQ96RT1 1412 aa18.41■□□□□ 0.54
LYSMD3-204ENST00000509384 MYT1LQ9UL68 1186 aa18.4■□□□□ 0.54
LYSMD3-204ENST00000509384 DENND4BO75064 1496 aaPredicted RBP18.4■□□□□ 0.54
LYSMD3-204ENST00000509384 TEX14Q8IWB6 1497 aa18.39■□□□□ 0.53
LYSMD3-204ENST00000509384 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
LYSMD3-204ENST00000509384 KDM5CP41229 1560 aa18.38■□□□□ 0.53
LYSMD3-204ENST00000509384 PZPP20742 1482 aa18.38■□□□□ 0.53
LYSMD3-204ENST00000509384 KDM5DQ9BY66 1539 aa18.37■□□□□ 0.53
LYSMD3-204ENST00000509384 NUP155O75694 1391 aa18.37■□□□□ 0.53
LYSMD3-204ENST00000509384 MLH3Q9UHC1 1453 aa18.35■□□□□ 0.53
LYSMD3-204ENST00000509384 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.53
LYSMD3-204ENST00000509384 HECW2Q9P2P5 1572 aa18.33■□□□□ 0.53
LYSMD3-204ENST00000509384 PPRC1Q5VV67 1664 aaKnown RBP18.33■□□□□ 0.52
LYSMD3-204ENST00000509384 UNC13BO14795 1591 aa18.33■□□□□ 0.52
LYSMD3-204ENST00000509384 RAPGEF3O95398 923 aa18.33■□□□□ 0.52
LYSMD3-204ENST00000509384 NEUROD1Q13562 356 aa18.33■□□□□ 0.52
LYSMD3-204ENST00000509384 KIF13AQ9H1H9 1805 aa18.32■□□□□ 0.52
LYSMD3-204ENST00000509384 KIDINS220Q9ULH0 1771 aa18.32■□□□□ 0.52
LYSMD3-204ENST00000509384 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
LYSMD3-204ENST00000509384 FOXD1Q16676 465 aa18.3■□□□□ 0.52
LYSMD3-204ENST00000509384 TSPOAP1O95153 1857 aa18.3■□□□□ 0.52
LYSMD3-204ENST00000509384 MAGI2Q86UL8 1455 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms