RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 PLCH2O75038 1416 aa26.56■■□□□ 1.84
DDR1-263ENST00000508317 ARHGEF40Q8TER5 1519 aa26.55■■□□□ 1.84
DDR1-263ENST00000508317 SCAPERQ9BY12 1400 aa26.54■■□□□ 1.84
DDR1-263ENST00000508317 SIGLEC1Q9BZZ2 1709 aa26.53■■□□□ 1.84
DDR1-263ENST00000508317 CERKQ8TCT0 537 aa26.53■■□□□ 1.84
DDR1-263ENST00000508317 MAGI2Q86UL8 1455 aa26.52■■□□□ 1.84
DDR1-263ENST00000508317 TTC37Q6PGP7 1564 aa26.51■■□□□ 1.83
DDR1-263ENST00000508317 TROQ12816 1431 aaPredicted RBP26.49■■□□□ 1.83
DDR1-263ENST00000508317 ZFYVE16Q7Z3T8 1539 aa26.47■■□□□ 1.83
DDR1-263ENST00000508317 KIF14Q15058 1648 aa26.46■■□□□ 1.83
DDR1-263ENST00000508317 MLECQ14165 292 aa26.45■■□□□ 1.82
DDR1-263ENST00000508317 PLPPR3Q6T4P5 718 aa26.45■■□□□ 1.82
DDR1-263ENST00000508317 RICTORQ6R327 1708 aa26.45■■□□□ 1.82
DDR1-263ENST00000508317 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
DDR1-263ENST00000508317 ZMYM4Q5VZL5 1548 aa26.43■■□□□ 1.82
DDR1-263ENST00000508317 ARHGAP5Q13017 1502 aa26.42■■□□□ 1.82
DDR1-263ENST00000508317 CASKIN1Q8WXD9 1431 aa26.41■■□□□ 1.82
DDR1-263ENST00000508317 YEATS2Q9ULM3 1422 aa26.4■■□□□ 1.82
DDR1-263ENST00000508317 SOCS7O14512 581 aa26.4■■□□□ 1.82
DDR1-263ENST00000508317 DISP3Q9P2K9 1392 aa26.4■■□□□ 1.82
DDR1-263ENST00000508317 ZNF518AQ6AHZ1 1483 aa26.38■■□□□ 1.81
DDR1-263ENST00000508317 ATP10AO60312 1499 aa26.36■■□□□ 1.81
DDR1-263ENST00000508317 MYO5CQ9NQX4 1742 aa26.36■■□□□ 1.81
DDR1-263ENST00000508317 ESF1Q9H501 851 aaKnown RBP26.35■■□□□ 1.81
DDR1-263ENST00000508317 C9orf84Q5VXU9 1444 aa26.33■■□□□ 1.81
DDR1-263ENST00000508317 AFAP1Q8N556 730 aa26.33■■□□□ 1.81
DDR1-263ENST00000508317 FYCO1Q9BQS8 1478 aa26.3■■□□□ 1.8
DDR1-263ENST00000508317 ZNF777Q9ULD5 760 aaPredicted RBP26.29■■□□□ 1.8
DDR1-263ENST00000508317 FER1L4A9Z1Z3 1794 aa26.25■■□□□ 1.79
DDR1-263ENST00000508317 ARHGEF12Q9NZN5 1544 aa26.24■■□□□ 1.79
DDR1-263ENST00000508317 STRCQ7RTU9 1775 aa26.23■■□□□ 1.79
DDR1-263ENST00000508317 MTUS2Q5JR59 1369 aa26.2■■□□□ 1.79
DDR1-263ENST00000508317 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.79
DDR1-263ENST00000508317 CEBPAP49715 358 aaPredicted RBP26.2■■□□□ 1.78
DDR1-263ENST00000508317 CFDP1Q9UEE9 299 aaPredicted RBP26.2■■□□□ 1.78
DDR1-263ENST00000508317 PREX1Q8TCU6 1659 aa26.19■■□□□ 1.78
DDR1-263ENST00000508317 CCNB3Q8WWL7 1395 aa26.18■■□□□ 1.78
DDR1-263ENST00000508317 MLH3Q9UHC1 1453 aa26.17■■□□□ 1.78
DDR1-263ENST00000508317 KDM5CP41229 1560 aa26.16■■□□□ 1.78
DDR1-263ENST00000508317 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.78
DDR1-263ENST00000508317 PREX2Q70Z35 1606 aa26.14■■□□□ 1.77
DDR1-263ENST00000508317 TRAPPC8Q9Y2L5 1435 aa26.13■■□□□ 1.77
DDR1-263ENST00000508317 PLEKHH2Q8IVE3 1493 aa26.11■■□□□ 1.77
DDR1-263ENST00000508317 ABCC1P33527 1531 aa26.1■■□□□ 1.77
DDR1-263ENST00000508317 DMRT2Q9Y5R5 561 aa26.1■■□□□ 1.77
DDR1-263ENST00000508317 HNRNPMP52272 730 aaKnown RBP eCLIP26.09■■□□□ 1.77
DDR1-263ENST00000508317 LRRIQ1Q96JM4 1722 aa26.08■■□□□ 1.77
DDR1-263ENST00000508317 LTBP4Q8N2S1 1624 aa26.06■■□□□ 1.76
DDR1-263ENST00000508317 CDC42BPBQ9Y5S2 1711 aa26.06■■□□□ 1.76
DDR1-263ENST00000508317 GPATCH8Q9UKJ3 1502 aaKnown RBP26.06■■□□□ 1.76
DDR1-263ENST00000508317 UHRF1BP1Q6BDS2 1440 aa26.05■■□□□ 1.76
DDR1-263ENST00000508317 DIP2CQ9Y2E4 1556 aa26.05■■□□□ 1.76
DDR1-263ENST00000508317 REREQ9P2R6 1566 aa26.04■■□□□ 1.76
DDR1-263ENST00000508317 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
DDR1-263ENST00000508317 KIAA1107Q9UPP5 1409 aa26.03■■□□□ 1.76
DDR1-263ENST00000508317 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
DDR1-263ENST00000508317 AGLP35573 1532 aa26.02■■□□□ 1.76
DDR1-263ENST00000508317 PTPRTO14522 1441 aa26.01■■□□□ 1.75
DDR1-263ENST00000508317 ITSN2Q9NZM3 1697 aa25.99■■□□□ 1.75
DDR1-263ENST00000508317 SYCP2Q9BX26 1530 aa25.98■■□□□ 1.75
DDR1-263ENST00000508317 ABCA6Q8N139 1617 aa25.97■■□□□ 1.75
DDR1-263ENST00000508317 CDC42BPAQ5VT25 1732 aa25.97■■□□□ 1.75
DDR1-263ENST00000508317 SAMD9LQ8IVG5 1584 aa25.95■■□□□ 1.75
DDR1-263ENST00000508317 EHBP1L1Q8N3D4 1523 aa25.94■■□□□ 1.74
DDR1-263ENST00000508317 GGT6Q6P531 493 aa25.92■■□□□ 1.74
DDR1-263ENST00000508317 C3P01024 1663 aa25.92■■□□□ 1.74
DDR1-263ENST00000508317 RSPH4AQ5TD94 716 aa25.91■■□□□ 1.74
DDR1-263ENST00000508317 PPP6R1Q9UPN7 881 aa25.9■■□□□ 1.74
DDR1-263ENST00000508317 IQSEC2Q5JU85 1478 aa25.9■■□□□ 1.74
DDR1-263ENST00000508317 ATP7AQ04656 1500 aa25.89■■□□□ 1.74
DDR1-263ENST00000508317 A2MP01023 1474 aa25.89■■□□□ 1.73
DDR1-263ENST00000508317 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
DDR1-263ENST00000508317 KIDINS220Q9ULH0 1771 aa25.88■■□□□ 1.73
DDR1-263ENST00000508317 ZMYM3Q14202 1370 aa25.86■■□□□ 1.73
DDR1-263ENST00000508317 ZNF644Q9H582 1327 aaPredicted RBP25.86■■□□□ 1.73
DDR1-263ENST00000508317 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
DDR1-263ENST00000508317 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
DDR1-263ENST00000508317 NPATQ14207 1427 aa25.83■■□□□ 1.73
DDR1-263ENST00000508317 APLP2Q06481 763 aa25.83■■□□□ 1.73
DDR1-263ENST00000508317 SETD1BQ9UPS6 1966 aaKnown RBP25.82■■□□□ 1.72
DDR1-263ENST00000508317 RTEL1-TNFRSF6BF6WH68 1400 aa25.81■■□□□ 1.72
DDR1-263ENST00000508317 TIAM1Q13009 1591 aa25.79■■□□□ 1.72
DDR1-263ENST00000508317 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
DDR1-263ENST00000508317 NCOA2Q15596 1464 aa25.78■■□□□ 1.72
DDR1-263ENST00000508317 ZNF335Q9H4Z2 1342 aaPredicted RBP25.76■■□□□ 1.71
DDR1-263ENST00000508317 VPS8Q8N3P4 1428 aa25.76■■□□□ 1.71
DDR1-263ENST00000508317 INO80Q9ULG1 1556 aaPredicted RBP25.76■■□□□ 1.71
DDR1-263ENST00000508317 CAMSAP1Q5T5Y3 1602 aa25.76■■□□□ 1.71
DDR1-263ENST00000508317 SUPT6HQ7KZ85 1726 aaKnown RBP25.75■■□□□ 1.71
DDR1-263ENST00000508317 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
DDR1-263ENST00000508317 KIF3BO15066 747 aa25.75■■□□□ 1.71
DDR1-263ENST00000508317 CCDC141Q6ZP82 1450 aa25.74■■□□□ 1.71
DDR1-263ENST00000508317 MBD5Q9P267 1494 aa25.73■■□□□ 1.71
DDR1-263ENST00000508317 NCKAP5LQ9HCH0 1330 aa25.71■■□□□ 1.71
DDR1-263ENST00000508317 CAMSAP2Q08AD1 1489 aa25.71■■□□□ 1.71
DDR1-263ENST00000508317 MROH2AA6NES4 1674 aa25.71■■□□□ 1.71
DDR1-263ENST00000508317 PLXNC1O60486 1568 aa25.7■■□□□ 1.71
DDR1-263ENST00000508317 WASHC2CQ9Y4E1 1318 aa25.7■■□□□ 1.71
DDR1-263ENST00000508317 ADGBQ8N7X0 1667 aa25.69■■□□□ 1.7
DDR1-263ENST00000508317 UBAP1LF5GYI3 381 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms