RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 CFAP43Q8NDM7 1665 aa8.56□□□□□ -1.04
KDM3B-204ENST00000507996 PHLDB1Q86UU1 1377 aa8.56□□□□□ -1.04
KDM3B-204ENST00000507996 UACAQ9BZF9 1416 aa8.55□□□□□ -1.04
KDM3B-204ENST00000507996 MAP3K1Q13233 1512 aa8.55□□□□□ -1.04
KDM3B-204ENST00000507996 NCBP3Q53F19 620 aaKnown RBP8.55□□□□□ -1.04
KDM3B-204ENST00000507996 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
KDM3B-204ENST00000507996 DHX57Q6P158 1386 aaKnown RBP8.54□□□□□ -1.04
KDM3B-204ENST00000507996 CYB5RLQ6IPT4 315 aa8.54□□□□□ -1.04
KDM3B-204ENST00000507996 BCANQ96GW7 911 aa8.54□□□□□ -1.04
KDM3B-204ENST00000507996 MAGI3Q5TCQ9 1506 aa8.54□□□□□ -1.04
KDM3B-204ENST00000507996 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
KDM3B-204ENST00000507996 ATP10BO94823 1461 aa8.53□□□□□ -1.04
KDM3B-204ENST00000507996 ABCA8O94911 1581 aa8.53□□□□□ -1.04
KDM3B-204ENST00000507996 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
KDM3B-204ENST00000507996 CCNB3Q8WWL7 1395 aa8.52□□□□□ -1.04
KDM3B-204ENST00000507996 NPM3O75607 178 aaKnown RBP8.52□□□□□ -1.05
KDM3B-204ENST00000507996 NCOA2Q15596 1464 aa8.52□□□□□ -1.05
KDM3B-204ENST00000507996 ZBTB22O15209 634 aa8.52□□□□□ -1.05
KDM3B-204ENST00000507996 RIMBP3CA6NJZ7 1639 aa8.52□□□□□ -1.05
KDM3B-204ENST00000507996 RIMBP3BA6NNM3 1639 aa8.52□□□□□ -1.05
KDM3B-204ENST00000507996 RIMBP3Q9UFD9 1639 aa8.52□□□□□ -1.05
KDM3B-204ENST00000507996 EIF5BO60841 1220 aaKnown RBP8.51□□□□□ -1.05
KDM3B-204ENST00000507996 NPM1P06748 294 aaKnown RBP eCLIP8.51□□□□□ -1.05
KDM3B-204ENST00000507996 ARHGEF11O15085 1522 aa8.51□□□□□ -1.05
KDM3B-204ENST00000507996 EHBP1L1Q8N3D4 1523 aa8.51□□□□□ -1.05
KDM3B-204ENST00000507996 C11orf95C9JLR9 678 aaPredicted RBP8.51□□□□□ -1.05
KDM3B-204ENST00000507996 CCER2I3L3R5 266 aa8.5□□□□□ -1.05
KDM3B-204ENST00000507996 SUPT6HQ7KZ85 1726 aaKnown RBP8.5□□□□□ -1.05
KDM3B-204ENST00000507996 ABCC2Q92887 1545 aa8.49□□□□□ -1.05
KDM3B-204ENST00000507996 TROQ12816 1431 aaPredicted RBP8.49□□□□□ -1.05
KDM3B-204ENST00000507996 NOP58Q9Y2X3 529 aaKnown RBP8.48□□□□□ -1.05
KDM3B-204ENST00000507996 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
KDM3B-204ENST00000507996 CFDP1Q9UEE9 299 aaPredicted RBP8.48□□□□□ -1.05
KDM3B-204ENST00000507996 CHIC2Q9UKJ5 165 aa8.48□□□□□ -1.05
KDM3B-204ENST00000507996 WASHC2AQ641Q2 1341 aa8.47□□□□□ -1.05
KDM3B-204ENST00000507996 ZNF644Q9H582 1327 aaPredicted RBP8.47□□□□□ -1.05
KDM3B-204ENST00000507996 MYOM3Q5VTT5 1437 aa8.47□□□□□ -1.05
KDM3B-204ENST00000507996 FGD6Q6ZV73 1430 aa8.47□□□□□ -1.05
KDM3B-204ENST00000507996 PKNOX2Q96KN3 472 aa8.47□□□□□ -1.05
KDM3B-204ENST00000507996 KIF14Q15058 1648 aa8.46□□□□□ -1.05
KDM3B-204ENST00000507996 CCDC136Q96JN2 1154 aa8.46□□□□□ -1.06
KDM3B-204ENST00000507996 ADCY10Q96PN6 1610 aa8.45□□□□□ -1.06
KDM3B-204ENST00000507996 ZCCHC11Q5TAX3 1644 aaKnown RBP8.45□□□□□ -1.06
KDM3B-204ENST00000507996 WASHC2CQ9Y4E1 1318 aa8.44□□□□□ -1.06
KDM3B-204ENST00000507996 IL27Q8NEV9 243 aa8.43□□□□□ -1.06
KDM3B-204ENST00000507996 UHRF1BP1LA0JNW5 1464 aa8.43□□□□□ -1.06
KDM3B-204ENST00000507996 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
KDM3B-204ENST00000507996 RRP7BPQ9NSQ0 103 aa8.43□□□□□ -1.06
KDM3B-204ENST00000507996 DNAJC5Q9H3Z4 198 aa8.42□□□□□ -1.06
KDM3B-204ENST00000507996 PTPN23Q9H3S7 1636 aa8.42□□□□□ -1.06
KDM3B-204ENST00000507996 GPATCH8Q9UKJ3 1502 aaKnown RBP8.42□□□□□ -1.06
KDM3B-204ENST00000507996 HNRNPMP52272 730 aaKnown RBP eCLIP8.41□□□□□ -1.06
KDM3B-204ENST00000507996 ASXL2Q76L83 1435 aa8.41□□□□□ -1.06
KDM3B-204ENST00000507996 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.06
KDM3B-204ENST00000507996 USP35Q9P2H5 1018 aa8.4□□□□□ -1.06
KDM3B-204ENST00000507996 PPP4R2Q9NY27 417 aa8.4□□□□□ -1.07
KDM3B-204ENST00000507996 MIA2Q96PC5 1412 aa8.39□□□□□ -1.07
KDM3B-204ENST00000507996 MAPKBP1O60336 1514 aa8.39□□□□□ -1.07
KDM3B-204ENST00000507996 PTPRKQ15262 1439 aa8.39□□□□□ -1.07
KDM3B-204ENST00000507996 WDR7Q9Y4E6 1490 aa8.39□□□□□ -1.07
KDM3B-204ENST00000507996 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
KDM3B-204ENST00000507996 ABCC10Q5T3U5 1492 aa8.38□□□□□ -1.07
KDM3B-204ENST00000507996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.38□□□□□ -1.07
KDM3B-204ENST00000507996 TTC37Q6PGP7 1564 aa8.38□□□□□ -1.07
KDM3B-204ENST00000507996 ARHGAP5Q13017 1502 aa8.38□□□□□ -1.07
KDM3B-204ENST00000507996 PAK3O75914 559 aaPredicted RBP8.38□□□□□ -1.07
KDM3B-204ENST00000507996 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
KDM3B-204ENST00000507996 CAMSAP2Q08AD1 1489 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 CDC42BPAQ5VT25 1732 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 TSPY4P0CV99 314 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 TSPY10P0CW01 314 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 CNKSR2Q8WXI2 1034 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 RAB3GAP2Q9H2M9 1393 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 ITSN2Q9NZM3 1697 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
KDM3B-204ENST00000507996 IPO9Q96P70 1041 aaKnown RBP8.37□□□□□ -1.07
KDM3B-204ENST00000507996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.36□□□□□ -1.07
KDM3B-204ENST00000507996 SETD5Q9C0A6 1442 aa8.36□□□□□ -1.07
KDM3B-204ENST00000507996 RSPH6AQ9H0K4 717 aa8.36□□□□□ -1.07
KDM3B-204ENST00000507996 TCOF1Q13428 1488 aaKnown RBP8.35□□□□□ -1.07
KDM3B-204ENST00000507996 NBR1Q14596 966 aa8.35□□□□□ -1.07
KDM3B-204ENST00000507996 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
KDM3B-204ENST00000507996 FAM69CQ0P6D2 419 aa8.35□□□□□ -1.07
KDM3B-204ENST00000507996 DAPK1P53355 1430 aa8.35□□□□□ -1.07
KDM3B-204ENST00000507996 ABCC5O15440 1437 aa8.35□□□□□ -1.07
KDM3B-204ENST00000507996 CDC42BPBQ9Y5S2 1711 aa8.34□□□□□ -1.07
KDM3B-204ENST00000507996 PLCH2O75038 1416 aa8.33□□□□□ -1.08
KDM3B-204ENST00000507996 MYO5CQ9NQX4 1742 aa8.33□□□□□ -1.08
KDM3B-204ENST00000507996 AFAP1Q8N556 730 aa8.33□□□□□ -1.08
KDM3B-204ENST00000507996 PREX2Q70Z35 1606 aa8.32□□□□□ -1.08
KDM3B-204ENST00000507996 CD109Q6YHK3 1445 aa8.32□□□□□ -1.08
KDM3B-204ENST00000507996 TIMELESSQ9UNS1 1208 aa8.32□□□□□ -1.08
KDM3B-204ENST00000507996 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
KDM3B-204ENST00000507996 SYCP2Q9BX26 1530 aa8.31□□□□□ -1.08
KDM3B-204ENST00000507996 NAIPQ13075 1403 aa8.31□□□□□ -1.08
KDM3B-204ENST00000507996 GLIPR1L2Q4G1C9 344 aa8.31□□□□□ -1.08
KDM3B-204ENST00000507996 DNMT1P26358 1616 aaKnown RBP8.31□□□□□ -1.08
KDM3B-204ENST00000507996 FANCAO15360 1455 aa8.31□□□□□ -1.08
KDM3B-204ENST00000507996 ANP32AP39687 249 aaKnown RBP8.3□□□□□ -1.08
KDM3B-204ENST00000507996 HFM1A2PYH4 1435 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms